RNA–Protein interactions for RNA: ENST00000464304.1

HMG20B-208, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-208ENST00000464304 HIST2H2BEQ16778 126 aa12.22□□□□□ -0.45
HMG20B-208ENST00000464304 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.22□□□□□ -0.45
HMG20B-208ENST00000464304 Q6ZN92 141 aa12.22□□□□□ -0.45
HMG20B-208ENST00000464304 HIST1H2BHQ93079 126 aa12.22□□□□□ -0.45
HMG20B-208ENST00000464304 SCGB3A1Q96QR1 104 aa12.22□□□□□ -0.45
HMG20B-208ENST00000464304 AMELXQ99217 191 aa12.22□□□□□ -0.45
HMG20B-208ENST00000464304 HIST1H2BNQ99877 126 aa12.22□□□□□ -0.45
HMG20B-208ENST00000464304 HIST1H2BMQ99879 126 aa12.22□□□□□ -0.45
HMG20B-208ENST00000464304 A0A096LNJ9 63 aa12.21□□□□□ -0.45
HMG20B-208ENST00000464304 hDV102S1A0JD36 115 aa12.21□□□□□ -0.45
HMG20B-208ENST00000464304 ERASQ7Z444 233 aa12.21□□□□□ -0.45
HMG20B-208ENST00000464304 HSBP1O75506 76 aa12.2□□□□□ -0.46
HMG20B-208ENST00000464304 HBDP02042 147 aa12.2□□□□□ -0.46
HMG20B-208ENST00000464304 CFAP161Q6P656 301 aa12.2□□□□□ -0.46
HMG20B-208ENST00000464304 VCX2Q9H322 139 aa12.2□□□□□ -0.46
HMG20B-208ENST00000464304 PMCHL1Q16048 86 aa12.19□□□□□ -0.46
HMG20B-208ENST00000464304 LINC01620Q4KN68 170 aa12.19□□□□□ -0.46
HMG20B-208ENST00000464304 HIGD2BQ4VC39 106 aa12.19□□□□□ -0.46
HMG20B-208ENST00000464304 C5orf38Q86SI9 138 aa12.19□□□□□ -0.46
HMG20B-208ENST00000464304 C2orf88Q9BSF0 95 aa12.19□□□□□ -0.46
HMG20B-208ENST00000464304 COX7A2LO14548 114 aa12.18□□□□□ -0.46
HMG20B-208ENST00000464304 SERF1AO75920 110 aa12.18□□□□□ -0.46
HMG20B-208ENST00000464304 UBE2D1P51668 147 aa12.18□□□□□ -0.46
HMG20B-208ENST00000464304 PAPPA-AS1Q5QFB9 102 aa12.18□□□□□ -0.46
HMG20B-208ENST00000464304 LINC00242Q5T6M2 205 aa12.18□□□□□ -0.46
HMG20B-208ENST00000464304 GVQW2A0A096LPI5 108 aaPredicted RBP12.17□□□□□ -0.46
HMG20B-208ENST00000464304 IGHV1-58A0A0C4DH39 117 aa12.17□□□□□ -0.46
HMG20B-208ENST00000464304 LRP1BQ9NZR2 4599 aa12.17□□□□□ -0.46
HMG20B-208ENST00000464304 IGHV3OR16-9A0A0B4J2B5 98 aa12.16□□□□□ -0.46
HMG20B-208ENST00000464304 SLPIP03973 132 aa12.16□□□□□ -0.46
HMG20B-208ENST00000464304 MALP21145 153 aa12.16□□□□□ -0.46
HMG20B-208ENST00000464304 COX6A2Q02221 97 aa12.16□□□□□ -0.46
HMG20B-208ENST00000464304 TMEM238LA0A1B0GVL6 79 aa12.14□□□□□ -0.47
HMG20B-208ENST00000464304 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.14□□□□□ -0.47
HMG20B-208ENST00000464304 LINC00310P59036 64 aa12.14□□□□□ -0.47
HMG20B-208ENST00000464304 CNBPP62633 177 aaKnown RBP12.14□□□□□ -0.47
HMG20B-208ENST00000464304 PDZD11Q5EBL8 140 aa12.14□□□□□ -0.47
HMG20B-208ENST00000464304 LINC00526Q96FQ7 95 aa12.14□□□□□ -0.47
HMG20B-208ENST00000464304 KRTAP3-3Q9BYR6 98 aa12.14□□□□□ -0.47
HMG20B-208ENST00000464304 KRTAP3-2Q9BYR7 98 aa12.14□□□□□ -0.47
HMG20B-208ENST00000464304 ATP5LO75964 103 aa12.13□□□□□ -0.47
HMG20B-208ENST00000464304 CDK2AP2O75956 126 aa12.12□□□□□ -0.47
HMG20B-208ENST00000464304 COA6Q5JTJ3 125 aaKnown RBP12.12□□□□□ -0.47
HMG20B-208ENST00000464304 FAM19A3Q7Z5A8 133 aa12.12□□□□□ -0.47
HMG20B-208ENST00000464304 FAM19A2Q8N3H0 131 aa12.12□□□□□ -0.47
HMG20B-208ENST00000464304 C9orf163Q8N9P6 203 aa12.12□□□□□ -0.47
HMG20B-208ENST00000464304 APOMO95445 188 aa12.11□□□□□ -0.47
HMG20B-208ENST00000464304 NDUFA6P56556 154 aa12.11□□□□□ -0.47
HMG20B-208ENST00000464304 PMVKQ15126 192 aa12.11□□□□□ -0.47
HMG20B-208ENST00000464304 LCE2DQ5TA82 110 aaPredicted RBP12.11□□□□□ -0.47
HMG20B-208ENST00000464304 FAM30AQ9NZY2 134 aa12.11□□□□□ -0.47
HMG20B-208ENST00000464304 A0A087WZ39 114 aa12.1□□□□□ -0.47
HMG20B-208ENST00000464304 A0A0J9YXV3 536 aa12.1□□□□□ -0.47
HMG20B-208ENST00000464304 ZNF561-AS1K7EIQ3 104 aa12.1□□□□□ -0.47
HMG20B-208ENST00000464304 NUPR1O60356 82 aa12.1□□□□□ -0.47
HMG20B-208ENST00000464304 CST9LQ9H4G1 147 aa12.1□□□□□ -0.47
HMG20B-208ENST00000464304 IGHV3-64A0A075B6Q5 118 aa12.09□□□□□ -0.47
HMG20B-208ENST00000464304 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.09□□□□□ -0.47
HMG20B-208ENST00000464304 ORAOV1Q8WV07 137 aa12.09□□□□□ -0.47
HMG20B-208ENST00000464304 HERC1Q15751 4861 aa12.09□□□□□ -0.47
HMG20B-208ENST00000464304 IGLV4-69A0A075B6H9 119 aa12.08□□□□□ -0.48
HMG20B-208ENST00000464304 LEPROTL1O95214 131 aa12.08□□□□□ -0.48
HMG20B-208ENST00000464304 XGP55808 180 aa12.08□□□□□ -0.48
HMG20B-208ENST00000464304 HERVK_113P63121 156 aa12.08□□□□□ -0.48
HMG20B-208ENST00000464304 SEC11AP67812 179 aa12.08□□□□□ -0.48
HMG20B-208ENST00000464304 SPAG11BQ08648 103 aa12.08□□□□□ -0.48
HMG20B-208ENST00000464304 GEMIN7Q9H840 131 aaKnown RBP12.08□□□□□ -0.48
HMG20B-208ENST00000464304 HAMPP81172 84 aa12.07□□□□□ -0.48
HMG20B-208ENST00000464304 Q6ZSA8 131 aa12.07□□□□□ -0.48
HMG20B-208ENST00000464304 OR10D4PQ8NGN7 298 aa12.07□□□□□ -0.48
HMG20B-208ENST00000464304 HSPB8Q9UJY1 196 aa12.07□□□□□ -0.48
HMG20B-208ENST00000464304 S100A6P06703 90 aa12.06□□□□□ -0.48
HMG20B-208ENST00000464304 IFI27L1Q96BM0 104 aa12.06□□□□□ -0.48
HMG20B-208ENST00000464304 CDKN2A-AS1Q9UH64 79 aa12.06□□□□□ -0.48
HMG20B-208ENST00000464304 APOBP04114 4563 aaKnown RBP12.06□□□□□ -0.48
HMG20B-208ENST00000464304 TINCRA0A1B0GVN0 87 aa12.05□□□□□ -0.48
HMG20B-208ENST00000464304 SYCNQ0VAF6 134 aa12.05□□□□□ -0.48
HMG20B-208ENST00000464304 LINC01561Q8N1V8 128 aa12.05□□□□□ -0.48
HMG20B-208ENST00000464304 CARD19Q96LW7 228 aa12.05□□□□□ -0.48
HMG20B-208ENST00000464304 FABP4P15090 132 aa12.04□□□□□ -0.48
HMG20B-208ENST00000464304 SDIM1Q6ZPB5 146 aa12.04□□□□□ -0.48
HMG20B-208ENST00000464304 C2orf48Q96LS8 159 aa12.04□□□□□ -0.48
HMG20B-208ENST00000464304 PACRGQ96M98 296 aaPredicted RBP12.04□□□□□ -0.48
HMG20B-208ENST00000464304 CAMK2N2Q96S95 79 aa12.04□□□□□ -0.48
HMG20B-208ENST00000464304 Q6ZRU5 148 aa12.03□□□□□ -0.48
HMG20B-208ENST00000464304 LINC00469Q8N7U9 141 aa12.03□□□□□ -0.48
HMG20B-208ENST00000464304 DNAH8Q96JB1 4490 aa12.03□□□□□ -0.48
HMG20B-208ENST00000464304 IGLV5-45A0A087WSX0 123 aa12.02□□□□□ -0.49
HMG20B-208ENST00000464304 IGLC3P0DOY3 106 aa12.02□□□□□ -0.49
HMG20B-208ENST00000464304 KIAA0087Q14695 138 aa12.02□□□□□ -0.49
HMG20B-208ENST00000464304 CHAC1Q9BUX1 264 aa12.02□□□□□ -0.49
HMG20B-208ENST00000464304 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.01□□□□□ -0.49
HMG20B-208ENST00000464304 TRAV12-1A0A0B4J245 112 aa12□□□□□ -0.49
HMG20B-208ENST00000464304 PANO1I0J062 215 aa12□□□□□ -0.49
HMG20B-208ENST00000464304 CHTF8P0CG12 524 aa11.99□□□□□ -0.49
HMG20B-208ENST00000464304 SCXQ7RTU7 201 aa11.99□□□□□ -0.49
HMG20B-208ENST00000464304 MAP1LC3CQ9BXW4 147 aa11.99□□□□□ -0.49
HMG20B-208ENST00000464304 TOMM7Q9P0U1 55 aa11.99□□□□□ -0.49
HMG20B-208ENST00000464304 SMIM1B2RUZ4 78 aa11.98□□□□□ -0.49
HMG20B-208ENST00000464304 NDUFA1O15239 70 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms