RNA–Protein interactions for RNA: ENST00000464263.1

RAB11FIP3-208, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 3

Gene RAB11FIP3, Length 329 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-208ENST00000464263 VCX2Q9H322 139 aa9.94□□□□□ -0.82
RAB11FIP3-208ENST00000464263 LINC01549A6NIU2 74 aa9.93□□□□□ -0.82
RAB11FIP3-208ENST00000464263 MALP21145 153 aa9.93□□□□□ -0.82
RAB11FIP3-208ENST00000464263 UBE2D1P51668 147 aa9.93□□□□□ -0.82
RAB11FIP3-208ENST00000464263 LINC00242Q5T6M2 205 aa9.93□□□□□ -0.82
RAB11FIP3-208ENST00000464263 Q6ZN92 141 aa9.93□□□□□ -0.82
RAB11FIP3-208ENST00000464263 SDIM1Q6ZPB5 146 aa9.93□□□□□ -0.82
RAB11FIP3-208ENST00000464263 SCGB3A1Q96QR1 104 aa9.93□□□□□ -0.82
RAB11FIP3-208ENST00000464263 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.92□□□□□ -0.82
RAB11FIP3-208ENST00000464263 COLCA2A8K830 154 aa9.92□□□□□ -0.82
RAB11FIP3-208ENST00000464263 HAMPP81172 84 aa9.92□□□□□ -0.82
RAB11FIP3-208ENST00000464263 COX6A2Q02221 97 aa9.92□□□□□ -0.82
RAB11FIP3-208ENST00000464263 PAPPA-AS1Q5QFB9 102 aa9.91□□□□□ -0.82
RAB11FIP3-208ENST00000464263 FAM19A3Q7Z5A8 133 aa9.91□□□□□ -0.82
RAB11FIP3-208ENST00000464263 LINC00526Q96FQ7 95 aa9.91□□□□□ -0.82
RAB11FIP3-208ENST00000464263 C2orf88Q9BSF0 95 aa9.91□□□□□ -0.82
RAB11FIP3-208ENST00000464263 A0A096LNJ9 63 aa9.9□□□□□ -0.82
RAB11FIP3-208ENST00000464263 TRGC2P03986 189 aa9.9□□□□□ -0.82
RAB11FIP3-208ENST00000464263 Q8N1X5 172 aa9.9□□□□□ -0.82
RAB11FIP3-208ENST00000464263 IGHV3-64A0A075B6Q5 118 aa9.89□□□□□ -0.83
RAB11FIP3-208ENST00000464263 A0A087WZ39 114 aa9.89□□□□□ -0.83
RAB11FIP3-208ENST00000464263 ZNF561-AS1K7EIQ3 104 aa9.89□□□□□ -0.83
RAB11FIP3-208ENST00000464263 APOMO95445 188 aa9.89□□□□□ -0.83
RAB11FIP3-208ENST00000464263 RAB5BP61020 215 aa9.89□□□□□ -0.83
RAB11FIP3-208ENST00000464263 KRTAP4-5Q9BYR2 181 aa9.89□□□□□ -0.83
RAB11FIP3-208ENST00000464263 IGLV4-69A0A075B6H9 119 aa9.88□□□□□ -0.83
RAB11FIP3-208ENST00000464263 SCO1O75880 301 aa9.88□□□□□ -0.83
RAB11FIP3-208ENST00000464263 CHAC1Q9BUX1 264 aa9.88□□□□□ -0.83
RAB11FIP3-208ENST00000464263 PMCHL1Q16048 86 aa9.87□□□□□ -0.83
RAB11FIP3-208ENST00000464263 SCXQ7RTU7 201 aa9.87□□□□□ -0.83
RAB11FIP3-208ENST00000464263 OR10D4PQ8NGN7 298 aa9.87□□□□□ -0.83
RAB11FIP3-208ENST00000464263 PANO1I0J062 215 aa9.86□□□□□ -0.83
RAB11FIP3-208ENST00000464263 HBDP02042 147 aa9.86□□□□□ -0.83
RAB11FIP3-208ENST00000464263 SMR3BP02814 79 aaPredicted RBP9.86□□□□□ -0.83
RAB11FIP3-208ENST00000464263 SYCNQ0VAF6 134 aa9.86□□□□□ -0.83
RAB11FIP3-208ENST00000464263 PDZD11Q5EBL8 140 aa9.86□□□□□ -0.83
RAB11FIP3-208ENST00000464263 LINC01561Q8N1V8 128 aa9.86□□□□□ -0.83
RAB11FIP3-208ENST00000464263 CST9LQ9H4G1 147 aa9.86□□□□□ -0.83
RAB11FIP3-208ENST00000464263 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.86□□□□□ -0.83
RAB11FIP3-208ENST00000464263 A0A0J9YXV3 536 aa9.85□□□□□ -0.83
RAB11FIP3-208ENST00000464263 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.85□□□□□ -0.83
RAB11FIP3-208ENST00000464263 SEC11AP67812 179 aa9.85□□□□□ -0.83
RAB11FIP3-208ENST00000464263 SPAG11BQ08648 103 aa9.85□□□□□ -0.83
RAB11FIP3-208ENST00000464263 CIRBPQ14011 172 aaKnown RBP9.85□□□□□ -0.83
RAB11FIP3-208ENST00000464263 CIRBP-AS1Q8TBR5 109 aa9.85□□□□□ -0.83
RAB11FIP3-208ENST00000464263 ORAOV1Q8WV07 137 aa9.85□□□□□ -0.83
RAB11FIP3-208ENST00000464263 CHCHD1Q96BP2 118 aaKnown RBP9.85□□□□□ -0.83
RAB11FIP3-208ENST00000464263 C2orf48Q96LS8 159 aa9.85□□□□□ -0.83
RAB11FIP3-208ENST00000464263 CARD19Q96LW7 228 aa9.85□□□□□ -0.83
RAB11FIP3-208ENST00000464263 PMVKQ15126 192 aa9.84□□□□□ -0.83
RAB11FIP3-208ENST00000464263 Q6ZRU5 148 aa9.84□□□□□ -0.83
RAB11FIP3-208ENST00000464263 HERVK_113P63121 156 aa9.83□□□□□ -0.84
RAB11FIP3-208ENST00000464263 KIAA0087Q14695 138 aa9.83□□□□□ -0.84
RAB11FIP3-208ENST00000464263 CAMK2N2Q96S95 79 aa9.83□□□□□ -0.84
RAB11FIP3-208ENST00000464263 FAT1Q14517 4588 aa9.82□□□□□ -0.84
RAB11FIP3-208ENST00000464263 TINCRA0A1B0GVN0 87 aa9.82□□□□□ -0.84
RAB11FIP3-208ENST00000464263 F8WDY8 70 aa9.82□□□□□ -0.84
RAB11FIP3-208ENST00000464263 CHTF8P0CG12 524 aa9.82□□□□□ -0.84
RAB11FIP3-208ENST00000464263 BAGE3Q86Y29 109 aa9.82□□□□□ -0.84
RAB11FIP3-208ENST00000464263 GEMIN7Q9H840 131 aaKnown RBP9.82□□□□□ -0.84
RAB11FIP3-208ENST00000464263 CDKN2A-AS1Q9UH64 79 aa9.82□□□□□ -0.84
RAB11FIP3-208ENST00000464263 EPM2AB3EWF7 344 aa9.81□□□□□ -0.84
RAB11FIP3-208ENST00000464263 ATP5LO75964 103 aa9.81□□□□□ -0.84
RAB11FIP3-208ENST00000464263 IGLV5-45A0A087WSX0 123 aa9.8□□□□□ -0.84
RAB11FIP3-208ENST00000464263 RNF151Q2KHN1 245 aa9.8□□□□□ -0.84
RAB11FIP3-208ENST00000464263 SPACA4Q8TDM5 124 aa9.8□□□□□ -0.84
RAB11FIP3-208ENST00000464263 A0A096LNI7 61 aa9.79□□□□□ -0.84
RAB11FIP3-208ENST00000464263 LINC00310P59036 64 aa9.79□□□□□ -0.84
RAB11FIP3-208ENST00000464263 C10orf25Q5T742 122 aa9.79□□□□□ -0.84
RAB11FIP3-208ENST00000464263 Q5VSD8 79 aa9.79□□□□□ -0.84
RAB11FIP3-208ENST00000464263 UNQ6190/PRO20217Q6UXQ8 127 aa9.79□□□□□ -0.84
RAB11FIP3-208ENST00000464263 MRPL35Q9NZE8 188 aaKnown RBP9.79□□□□□ -0.84
RAB11FIP3-208ENST00000464263 FAM229AH3BQW9 127 aa9.78□□□□□ -0.84
RAB11FIP3-208ENST00000464263 HSBP1O75506 76 aa9.78□□□□□ -0.84
RAB11FIP3-208ENST00000464263 SERF1AO75920 110 aa9.78□□□□□ -0.84
RAB11FIP3-208ENST00000464263 NDUFA6P56556 154 aa9.78□□□□□ -0.84
RAB11FIP3-208ENST00000464263 FAM19A2Q8N3H0 131 aa9.78□□□□□ -0.84
RAB11FIP3-208ENST00000464263 DPH3Q96FX2 82 aa9.78□□□□□ -0.84
RAB11FIP3-208ENST00000464263 PKIGQ9Y2B9 76 aa9.78□□□□□ -0.84
RAB11FIP3-208ENST00000464263 A0A087WYN8 130 aa9.77□□□□□ -0.85
RAB11FIP3-208ENST00000464263 IGKV2-24A0A0C4DH68 120 aa9.77□□□□□ -0.85
RAB11FIP3-208ENST00000464263 LOC107984640A0A0U1RRK4 108 aa9.77□□□□□ -0.85
RAB11FIP3-208ENST00000464263 NDUFA1O15239 70 aa9.77□□□□□ -0.85
RAB11FIP3-208ENST00000464263 NUPR1O60356 82 aa9.77□□□□□ -0.85
RAB11FIP3-208ENST00000464263 IGLC3P0DOY3 106 aa9.77□□□□□ -0.85
RAB11FIP3-208ENST00000464263 LINC00469Q8N7U9 141 aa9.77□□□□□ -0.85
RAB11FIP3-208ENST00000464263 VPS13BQ7Z7G8 4022 aa9.77□□□□□ -0.85
RAB11FIP3-208ENST00000464263 SMIM1B2RUZ4 78 aa9.76□□□□□ -0.85
RAB11FIP3-208ENST00000464263 MAJINQ3KP22 176 aa9.76□□□□□ -0.85
RAB11FIP3-208ENST00000464263 C2orf82Q6UX34 121 aa9.76□□□□□ -0.85
RAB11FIP3-208ENST00000464263 LINC00528Q8N1L1 170 aa9.76□□□□□ -0.85
RAB11FIP3-208ENST00000464263 PACRGQ96M98 296 aaPredicted RBP9.76□□□□□ -0.85
RAB11FIP3-208ENST00000464263 PLAC8Q9NZF1 115 aa9.76□□□□□ -0.85
RAB11FIP3-208ENST00000464263 C6orf48Q9UBA6 75 aa9.76□□□□□ -0.85
RAB11FIP3-208ENST00000464263 PCLOQ9Y6V0 5065 aa9.76□□□□□ -0.85
RAB11FIP3-208ENST00000464263 PTTG1IPP53801 180 aa9.75□□□□□ -0.85
RAB11FIP3-208ENST00000464263 Q8IZM0 81 aa9.75□□□□□ -0.85
RAB11FIP3-208ENST00000464263 IFI27L1Q96BM0 104 aa9.75□□□□□ -0.85
RAB11FIP3-208ENST00000464263 TOMM7Q9P0U1 55 aa9.75□□□□□ -0.85
RAB11FIP3-208ENST00000464263 LINC00474Q9P2X8 69 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms