RNA–Protein interactions for RNA: ENST00000463705.5

CHRNA4-202, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 1 (best)

Gene CHRNA4, Length 5,201 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-202ENST00000463705 URB1-AS1Q96HZ7 61 aa9.77□□□□□ -0.84
CHRNA4-202ENST00000463705 WFDC9Q8NEX5 89 aa9.77□□□□□ -0.85
CHRNA4-202ENST00000463705 DHRS4-AS1Q9P1J3 65 aa9.77□□□□□ -0.85
CHRNA4-202ENST00000463705 IGHV4-30-4P0DP06 118 aa9.77□□□□□ -0.85
CHRNA4-202ENST00000463705 A0A087WZ39 114 aa9.77□□□□□ -0.85
CHRNA4-202ENST00000463705 TEX49A0A1B0GTD5 131 aa9.77□□□□□ -0.85
CHRNA4-202ENST00000463705 FAM19A5Q7Z5A7 132 aaPredicted RBP9.77□□□□□ -0.85
CHRNA4-202ENST00000463705 XAGE1AQ9HD64 81 aa9.77□□□□□ -0.85
CHRNA4-202ENST00000463705 A8MZ25 164 aa9.76□□□□□ -0.85
CHRNA4-202ENST00000463705 C6orf99Q4VX62 202 aa9.76□□□□□ -0.85
CHRNA4-202ENST00000463705 LOC107984640A0A0U1RRK4 108 aa9.76□□□□□ -0.85
CHRNA4-202ENST00000463705 SS18L2Q9UHA2 77 aa9.75□□□□□ -0.85
CHRNA4-202ENST00000463705 ADAMTS20P59510 1910 aa9.74□□□□□ -0.85
CHRNA4-202ENST00000463705 ZNF706Q9Y5V0 76 aaPredicted RBP9.74□□□□□ -0.85
CHRNA4-202ENST00000463705 J3KT08 172 aa9.74□□□□□ -0.85
CHRNA4-202ENST00000463705 ANKRD11Q6UB99 2663 aaPredicted RBP9.73□□□□□ -0.85
CHRNA4-202ENST00000463705 LST1O00453 97 aa9.73□□□□□ -0.85
CHRNA4-202ENST00000463705 C7orf33Q8WU49 177 aa9.73□□□□□ -0.85
CHRNA4-202ENST00000463705 EML5Q05BV3 1969 aa9.73□□□□□ -0.85
CHRNA4-202ENST00000463705 SLPIP03973 132 aa9.72□□□□□ -0.85
CHRNA4-202ENST00000463705 RAI1Q7Z5J4 1906 aaPredicted RBP9.72□□□□□ -0.85
CHRNA4-202ENST00000463705 COL4A2P08572 1712 aa9.72□□□□□ -0.85
CHRNA4-202ENST00000463705 A0A0J9YWU9 116 aa9.72□□□□□ -0.85
CHRNA4-202ENST00000463705 LINC00474Q9P2X8 69 aa9.71□□□□□ -0.85
CHRNA4-202ENST00000463705 CHD8Q9HCK8 2581 aa9.71□□□□□ -0.85
CHRNA4-202ENST00000463705 BEAN1Q3B7T3 259 aa9.71□□□□□ -0.85
CHRNA4-202ENST00000463705 NDUFC2O95298 119 aa9.71□□□□□ -0.86
CHRNA4-202ENST00000463705 CSDC2Q9Y534 153 aaKnown RBP9.71□□□□□ -0.86
CHRNA4-202ENST00000463705 LINC00242Q5T6M2 205 aa9.71□□□□□ -0.86
CHRNA4-202ENST00000463705 C1orf158Q8N1D5 194 aa9.71□□□□□ -0.86
CHRNA4-202ENST00000463705 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.7□□□□□ -0.86
CHRNA4-202ENST00000463705 NANOS2P60321 138 aaKnown RBP9.7□□□□□ -0.86
CHRNA4-202ENST00000463705 SMIM11BQ8TCY0 68 aa9.69□□□□□ -0.86
CHRNA4-202ENST00000463705 SMR3AQ99954 134 aa9.69□□□□□ -0.86
CHRNA4-202ENST00000463705 OXLD1Q5BKU9 147 aa9.69□□□□□ -0.86
CHRNA4-202ENST00000463705 NDUFV3P56181 108 aaKnown RBP9.69□□□□□ -0.86
CHRNA4-202ENST00000463705 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.68□□□□□ -0.86
CHRNA4-202ENST00000463705 F8WDY8 70 aa9.68□□□□□ -0.86
CHRNA4-202ENST00000463705 FHL2Q14192 279 aa9.68□□□□□ -0.86
CHRNA4-202ENST00000463705 USP9XQ93008 2570 aaPredicted RBP9.68□□□□□ -0.86
CHRNA4-202ENST00000463705 NUPR2A6NF83 97 aa9.68□□□□□ -0.86
CHRNA4-202ENST00000463705 MT-ATP8P03928 68 aa9.68□□□□□ -0.86
CHRNA4-202ENST00000463705 SDIM1Q6ZPB5 146 aa9.68□□□□□ -0.86
CHRNA4-202ENST00000463705 ZNF73O43830 326 aaPredicted RBP9.67□□□□□ -0.86
CHRNA4-202ENST00000463705 EGFEM1PQ0D2K5 195 aa9.67□□□□□ -0.86
CHRNA4-202ENST00000463705 Q8N2B8 174 aa9.67□□□□□ -0.86
CHRNA4-202ENST00000463705 POM121L12Q8N7R1 296 aa9.67□□□□□ -0.86
CHRNA4-202ENST00000463705 SMIM1B2RUZ4 78 aa9.67□□□□□ -0.86
CHRNA4-202ENST00000463705 UQCRQO14949 82 aa9.67□□□□□ -0.86
CHRNA4-202ENST00000463705 CCKP06307 115 aa9.67□□□□□ -0.86
CHRNA4-202ENST00000463705 AMELXQ99217 191 aa9.67□□□□□ -0.86
CHRNA4-202ENST00000463705 Q6ZQY7 126 aa9.67□□□□□ -0.86
CHRNA4-202ENST00000463705 IGKV2-28A0A075B6P5 120 aa9.66□□□□□ -0.86
CHRNA4-202ENST00000463705 CYSRT1A8MQ03 144 aa9.66□□□□□ -0.86
CHRNA4-202ENST00000463705 IGKV2D-28P01615 120 aa9.66□□□□□ -0.86
CHRNA4-202ENST00000463705 IMUPQ9GZP8 106 aa9.66□□□□□ -0.86
CHRNA4-202ENST00000463705 ENHOQ6UWT2 76 aa9.65□□□□□ -0.86
CHRNA4-202ENST00000463705 LINC00526Q96FQ7 95 aa9.64□□□□□ -0.87
CHRNA4-202ENST00000463705 TLN2Q9Y4G6 2542 aa9.64□□□□□ -0.87
CHRNA4-202ENST00000463705 IGKV4-1P06312 121 aa9.64□□□□□ -0.87
CHRNA4-202ENST00000463705 IGLV2-18A0A075B6J9 118 aa9.64□□□□□ -0.87
CHRNA4-202ENST00000463705 A0A096LNJ9 63 aa9.64□□□□□ -0.87
CHRNA4-202ENST00000463705 LINC01561Q8N1V8 128 aa9.64□□□□□ -0.87
CHRNA4-202ENST00000463705 ABCA12Q86UK0 2595 aa9.63□□□□□ -0.87
CHRNA4-202ENST00000463705 DOPEY1Q5JWR5 2465 aa9.63□□□□□ -0.87
CHRNA4-202ENST00000463705 SVIPQ8NHG7 77 aa9.62□□□□□ -0.87
CHRNA4-202ENST00000463705 A0A096LNI7 61 aa9.62□□□□□ -0.87
CHRNA4-202ENST00000463705 A0A1B0GUV1 79 aa9.62□□□□□ -0.87
CHRNA4-202ENST00000463705 USP9YO00507 2555 aaPredicted RBP9.61□□□□□ -0.87
CHRNA4-202ENST00000463705 PRB2P02812 416 aaPredicted RBP9.61□□□□□ -0.87
CHRNA4-202ENST00000463705 SEC61GP60059 68 aa9.61□□□□□ -0.87
CHRNA4-202ENST00000463705 C3orf22Q8N5N4 141 aa9.6□□□□□ -0.87
CHRNA4-202ENST00000463705 JMJD1CQ15652 2540 aa9.6□□□□□ -0.87
CHRNA4-202ENST00000463705 RPL28P46779 137 aaKnown RBP9.6□□□□□ -0.87
CHRNA4-202ENST00000463705 SCXQ7RTU7 201 aa9.6□□□□□ -0.87
CHRNA4-202ENST00000463705 PLAC8L1A1L4L8 177 aa9.6□□□□□ -0.87
CHRNA4-202ENST00000463705 COX6A2Q02221 97 aa9.6□□□□□ -0.87
CHRNA4-202ENST00000463705 IGLV4-60A0A075B6I1 120 aa9.59□□□□□ -0.87
CHRNA4-202ENST00000463705 LINC00694P0DN24 101 aa9.59□□□□□ -0.87
CHRNA4-202ENST00000463705 RETNQ9HD89 108 aa9.59□□□□□ -0.87
CHRNA4-202ENST00000463705 LRCOL1A6NCL2 159 aa9.59□□□□□ -0.87
CHRNA4-202ENST00000463705 UNQ6190/PRO20217Q6UXQ8 127 aa9.59□□□□□ -0.87
CHRNA4-202ENST00000463705 C20orf197Q8N268 126 aa9.59□□□□□ -0.87
CHRNA4-202ENST00000463705 M0R2N4 97 aa9.59□□□□□ -0.88
CHRNA4-202ENST00000463705 USP17L23D6RBM5 183 aa9.58□□□□□ -0.88
CHRNA4-202ENST00000463705 TSPEAR-AS2P59090 65 aa9.58□□□□□ -0.88
CHRNA4-202ENST00000463705 RPL37AP8A6NKH3 93 aa9.58□□□□□ -0.88
CHRNA4-202ENST00000463705 LY6G6CO95867 125 aa9.58□□□□□ -0.88
CHRNA4-202ENST00000463705 FAM236DA0A1B0GTK5 79 aa9.57□□□□□ -0.88
CHRNA4-202ENST00000463705 LINC01546A6NGU7 62 aa9.57□□□□□ -0.88
CHRNA4-202ENST00000463705 C3orf84H3BNL1 204 aa9.57□□□□□ -0.88
CHRNA4-202ENST00000463705 FAM236CP0DP71 79 aa9.57□□□□□ -0.88
CHRNA4-202ENST00000463705 ATP5EP56381 51 aaPredicted RBP9.57□□□□□ -0.88
CHRNA4-202ENST00000463705 Q6JHZ5 121 aa9.57□□□□□ -0.88
CHRNA4-202ENST00000463705 SPTBN4Q9H254 2564 aa9.57□□□□□ -0.88
CHRNA4-202ENST00000463705 FAM240AA0A1B0GVK7 77 aa9.57□□□□□ -0.88
CHRNA4-202ENST00000463705 Q6ZTC4 211 aa9.57□□□□□ -0.88
CHRNA4-202ENST00000463705 C2orf48Q96LS8 159 aa9.57□□□□□ -0.88
CHRNA4-202ENST00000463705 NDUFC1O43677 76 aa9.57□□□□□ -0.88
CHRNA4-202ENST00000463705 Q6ZSN1 163 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms