RNA–Protein interactions for RNA: ENST00000463511.1

SSNA1-203, Transcript of SS nuclear autoantigen 1, humanhuman

TSL 2

Gene SSNA1, Length 570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-203ENST00000463511 FA2HQ7L5A8 372 aa14.87□□□□□ -0.03
SSNA1-203ENST00000463511 OPRPNQ99935 248 aaPredicted RBP14.87□□□□□ -0.03
SSNA1-203ENST00000463511 CYSLTR1Q9Y271 337 aa14.87□□□□□ -0.03
SSNA1-203ENST00000463511 RNASE13Q5GAN3 156 aaKnown RBP14.86□□□□□ -0.03
SSNA1-203ENST00000463511 PYGO1Q9Y3Y4 419 aa14.86□□□□□ -0.03
SSNA1-203ENST00000463511 MRPS36P82909 103 aaKnown RBP14.85□□□□□ -0.03
SSNA1-203ENST00000463511 LINC00959A0A1B0GUT2 108 aa14.84□□□□□ -0.03
SSNA1-203ENST00000463511 LINC00614P0C842 121 aa14.84□□□□□ -0.03
SSNA1-203ENST00000463511 G0S2P27469 103 aa14.84□□□□□ -0.03
SSNA1-203ENST00000463511 SDIM1Q6ZPB5 146 aa14.83□□□□□ -0.04
SSNA1-203ENST00000463511 TOMM6Q96B49 74 aa14.83□□□□□ -0.04
SSNA1-203ENST00000463511 IGIPA6NJ69 53 aa14.82□□□□□ -0.04
SSNA1-203ENST00000463511 MT1HL1P0DM35 61 aa14.82□□□□□ -0.04
SSNA1-203ENST00000463511 AP5S1Q9NUS5 200 aa14.82□□□□□ -0.04
SSNA1-203ENST00000463511 IGLV4-3A0A075B6K6 122 aa14.81□□□□□ -0.04
SSNA1-203ENST00000463511 RAB5BP61020 215 aa14.81□□□□□ -0.04
SSNA1-203ENST00000463511 CHCHD10Q8WYQ3 142 aaPredicted RBP14.81□□□□□ -0.04
SSNA1-203ENST00000463511 GAGE12HA6NDE8 117 aa14.79□□□□□ -0.04
SSNA1-203ENST00000463511 SS18Q15532 418 aa14.79□□□□□ -0.04
SSNA1-203ENST00000463511 A0A096LNJ9 63 aa14.78□□□□□ -0.04
SSNA1-203ENST00000463511 hDV102S1A0JD36 115 aa14.78□□□□□ -0.04
SSNA1-203ENST00000463511 CCL25O15444 150 aa14.78□□□□□ -0.04
SSNA1-203ENST00000463511 TMEM141Q96I45 108 aa14.78□□□□□ -0.04
SSNA1-203ENST00000463511 NPSP0C0P6 89 aa14.77□□□□□ -0.05
SSNA1-203ENST00000463511 CNBPP62633 177 aaKnown RBP14.77□□□□□ -0.05
SSNA1-203ENST00000463511 CIRBPQ14011 172 aaKnown RBP14.77□□□□□ -0.05
SSNA1-203ENST00000463511 Q6ZRU5 148 aa14.77□□□□□ -0.05
SSNA1-203ENST00000463511 TRAV13-1A0A0B4J241 112 aa14.76□□□□□ -0.05
SSNA1-203ENST00000463511 LINC01549A6NIU2 74 aa14.76□□□□□ -0.05
SSNA1-203ENST00000463511 FOXI1Q12951 378 aa14.76□□□□□ -0.05
SSNA1-203ENST00000463511 ERASQ7Z444 233 aa14.76□□□□□ -0.05
SSNA1-203ENST00000463511 CHCHD1Q96BP2 118 aaKnown RBP14.76□□□□□ -0.05
SSNA1-203ENST00000463511 SCGB3A1Q96QR1 104 aa14.76□□□□□ -0.05
SSNA1-203ENST00000463511 TIMM17AQ99595 171 aa14.76□□□□□ -0.05
SSNA1-203ENST00000463511 C1orf196B1AJZ1 125 aa14.75□□□□□ -0.05
SSNA1-203ENST00000463511 XCL1P47992 114 aa14.75□□□□□ -0.05
SSNA1-203ENST00000463511 PMCHL1Q16048 86 aa14.75□□□□□ -0.05
SSNA1-203ENST00000463511 ZC2HC1BQ5TFG8 222 aa14.75□□□□□ -0.05
SSNA1-203ENST00000463511 LINC00173Q6ZV60 143 aa14.75□□□□□ -0.05
SSNA1-203ENST00000463511 BAGE3Q86Y29 109 aa14.75□□□□□ -0.05
SSNA1-203ENST00000463511 AMELXQ99217 191 aa14.75□□□□□ -0.05
SSNA1-203ENST00000463511 CHTF8P0CG12 524 aa14.74□□□□□ -0.05
SSNA1-203ENST00000463511 IFITM10A6NMD0 228 aa14.73□□□□□ -0.05
SSNA1-203ENST00000463511 CD164L2Q6UWJ8 174 aa14.73□□□□□ -0.05
SSNA1-203ENST00000463511 TEX43Q6ZNM6 134 aa14.73□□□□□ -0.05
SSNA1-203ENST00000463511 DPH3Q96FX2 82 aa14.73□□□□□ -0.05
SSNA1-203ENST00000463511 VCX2Q9H322 139 aa14.73□□□□□ -0.05
SSNA1-203ENST00000463511 IGHV3-64A0A075B6Q5 118 aa14.72□□□□□ -0.05
SSNA1-203ENST00000463511 HBDP02042 147 aa14.72□□□□□ -0.05
SSNA1-203ENST00000463511 SLPIP03973 132 aa14.72□□□□□ -0.05
SSNA1-203ENST00000463511 Q6ZN92 141 aa14.72□□□□□ -0.05
SSNA1-203ENST00000463511 A0A087WYN8 130 aa14.71□□□□□ -0.05
SSNA1-203ENST00000463511 TRAV16A0A0A6YYK6 109 aaPredicted RBP14.71□□□□□ -0.05
SSNA1-203ENST00000463511 LINC00310P59036 64 aa14.71□□□□□ -0.05
SSNA1-203ENST00000463511 PDZD11Q5EBL8 140 aa14.71□□□□□ -0.05
SSNA1-203ENST00000463511 PAPPA-AS1Q5QFB9 102 aa14.7□□□□□ -0.06
SSNA1-203ENST00000463511 SPACA4Q8TDM5 124 aa14.7□□□□□ -0.06
SSNA1-203ENST00000463511 HIST1H2BKO60814 126 aa14.69□□□□□ -0.06
SSNA1-203ENST00000463511 SERF1AO75920 110 aa14.69□□□□□ -0.06
SSNA1-203ENST00000463511 HIST1H2BJP06899 126 aa14.69□□□□□ -0.06
SSNA1-203ENST00000463511 HIST1H2BOP23527 126 aa14.69□□□□□ -0.06
SSNA1-203ENST00000463511 HIST1H2BBP33778 126 aa14.69□□□□□ -0.06
SSNA1-203ENST00000463511 UBE2D1P51668 147 aa14.69□□□□□ -0.06
SSNA1-203ENST00000463511 HIST1H2BDP58876 126 aa14.69□□□□□ -0.06
SSNA1-203ENST00000463511 HIST1H2BCP62807 126 aa14.69□□□□□ -0.06
SSNA1-203ENST00000463511 HIST2H2BEQ16778 126 aa14.69□□□□□ -0.06
SSNA1-203ENST00000463511 HIST2H2BFQ5QNW6 126 aaPredicted RBP14.69□□□□□ -0.06
SSNA1-203ENST00000463511 HIST1H2BHQ93079 126 aa14.69□□□□□ -0.06
SSNA1-203ENST00000463511 HIST1H2BNQ99877 126 aa14.69□□□□□ -0.06
SSNA1-203ENST00000463511 HIST1H2BMQ99879 126 aa14.69□□□□□ -0.06
SSNA1-203ENST00000463511 C2orf88Q9BSF0 95 aa14.69□□□□□ -0.06
SSNA1-203ENST00000463511 LINC00242Q5T6M2 205 aa14.68□□□□□ -0.06
SSNA1-203ENST00000463511 C15orf56Q8N910 161 aa14.68□□□□□ -0.06
SSNA1-203ENST00000463511 TNXBP22105 4242 aa14.68□□□□□ -0.06
SSNA1-203ENST00000463511 NUPR1O60356 82 aa14.67□□□□□ -0.06
SSNA1-203ENST00000463511 HSBP1O75506 76 aa14.67□□□□□ -0.06
SSNA1-203ENST00000463511 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP14.66□□□□□ -0.06
SSNA1-203ENST00000463511 COX6A2Q02221 97 aa14.66□□□□□ -0.06
SSNA1-203ENST00000463511 FAM19A2Q8N3H0 131 aa14.66□□□□□ -0.06
SSNA1-203ENST00000463511 IGHV3OR16-9A0A0B4J2B5 98 aa14.65□□□□□ -0.06
SSNA1-203ENST00000463511 CFAP161Q6P656 301 aa14.65□□□□□ -0.06
SSNA1-203ENST00000463511 FAM19A3Q7Z5A8 133 aa14.65□□□□□ -0.06
SSNA1-203ENST00000463511 C5orf38Q86SI9 138 aa14.65□□□□□ -0.06
SSNA1-203ENST00000463511 COX7A2LO14548 114 aa14.64□□□□□ -0.07
SSNA1-203ENST00000463511 CST9LQ9H4G1 147 aa14.64□□□□□ -0.07
SSNA1-203ENST00000463511 PLAC8Q9NZF1 115 aa14.64□□□□□ -0.07
SSNA1-203ENST00000463511 ATP5LO75964 103 aa14.63□□□□□ -0.07
SSNA1-203ENST00000463511 PMVKQ15126 192 aa14.63□□□□□ -0.07
SSNA1-203ENST00000463511 IGHV1-58A0A0C4DH39 117 aa14.62□□□□□ -0.07
SSNA1-203ENST00000463511 C7orf33Q8WU49 177 aa14.62□□□□□ -0.07
SSNA1-203ENST00000463511 LRP2P98164 4655 aa14.62□□□□□ -0.07
SSNA1-203ENST00000463511 GVQW2A0A096LPI5 108 aaPredicted RBP14.6□□□□□ -0.07
SSNA1-203ENST00000463511 A0A0J9YXV3 536 aa14.6□□□□□ -0.07
SSNA1-203ENST00000463511 MALP21145 153 aa14.6□□□□□ -0.07
SSNA1-203ENST00000463511 HIGD2BQ4VC39 106 aa14.6□□□□□ -0.07
SSNA1-203ENST00000463511 A0A087WZ39 114 aa14.58□□□□□ -0.08
SSNA1-203ENST00000463511 IGKV2-24A0A0C4DH68 120 aa14.58□□□□□ -0.08
SSNA1-203ENST00000463511 NDUFA6P56556 154 aa14.58□□□□□ -0.08
SSNA1-203ENST00000463511 SEC11AP67812 179 aa14.57□□□□□ -0.08
SSNA1-203ENST00000463511 MAJINQ3KP22 176 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms