RNA–Protein interactions for RNA: ENST00000463315.1

SEMA3D-203, Transcript of semaphorin 3D, humanhuman

TSL 2

Gene SEMA3D, Length 1,257 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3D-203ENST00000463315 TOMM6Q96B49 74 aa8.9□□□□□ -0.98
SEMA3D-203ENST00000463315 TIMM17AQ99595 171 aa8.9□□□□□ -0.98
SEMA3D-203ENST00000463315 IFITM10A6NMD0 228 aa8.89□□□□□ -0.99
SEMA3D-203ENST00000463315 COX7A2LO14548 114 aa8.89□□□□□ -0.99
SEMA3D-203ENST00000463315 RNASE13Q5GAN3 156 aaKnown RBP8.89□□□□□ -0.99
SEMA3D-203ENST00000463315 TEX43Q6ZNM6 134 aa8.89□□□□□ -0.99
SEMA3D-203ENST00000463315 RYR1P21817 5038 aa8.88□□□□□ -0.99
SEMA3D-203ENST00000463315 APOMO95445 188 aa8.88□□□□□ -0.99
SEMA3D-203ENST00000463315 FA2HQ7L5A8 372 aa8.88□□□□□ -0.99
SEMA3D-203ENST00000463315 ERASQ7Z444 233 aa8.88□□□□□ -0.99
SEMA3D-203ENST00000463315 AMELXQ99217 191 aa8.88□□□□□ -0.99
SEMA3D-203ENST00000463315 OPRPNQ99935 248 aaPredicted RBP8.88□□□□□ -0.99
SEMA3D-203ENST00000463315 C2orf88Q9BSF0 95 aa8.88□□□□□ -0.99
SEMA3D-203ENST00000463315 VCX2Q9H322 139 aa8.88□□□□□ -0.99
SEMA3D-203ENST00000463315 IGHV3OR16-9A0A0B4J2B5 98 aa8.87□□□□□ -0.99
SEMA3D-203ENST00000463315 MALP21145 153 aa8.87□□□□□ -0.99
SEMA3D-203ENST00000463315 RAB5BP61020 215 aa8.87□□□□□ -0.99
SEMA3D-203ENST00000463315 FAM19A3Q7Z5A8 133 aa8.87□□□□□ -0.99
SEMA3D-203ENST00000463315 Q8N1X5 172 aa8.87□□□□□ -0.99
SEMA3D-203ENST00000463315 C18orf32Q8TCD1 76 aa8.87□□□□□ -0.99
SEMA3D-203ENST00000463315 KRTAP4-12Q9BQ66 201 aa8.87□□□□□ -0.99
SEMA3D-203ENST00000463315 SLPIP03973 132 aa8.86□□□□□ -0.99
SEMA3D-203ENST00000463315 LINC00614P0C842 121 aa8.86□□□□□ -0.99
SEMA3D-203ENST00000463315 SEC11AP67812 179 aa8.86□□□□□ -0.99
SEMA3D-203ENST00000463315 SDIM1Q6ZPB5 146 aa8.86□□□□□ -0.99
SEMA3D-203ENST00000463315 CBLN2Q8IUK8 224 aa8.86□□□□□ -0.99
SEMA3D-203ENST00000463315 FAM30AQ9NZY2 134 aa8.86□□□□□ -0.99
SEMA3D-203ENST00000463315 PKIGQ9Y2B9 76 aa8.86□□□□□ -0.99
SEMA3D-203ENST00000463315 IGHV3-64A0A075B6Q5 118 aa8.85□□□□□ -0.99
SEMA3D-203ENST00000463315 F8WDY8 70 aa8.85□□□□□ -0.99
SEMA3D-203ENST00000463315 ZNF561-AS1K7EIQ3 104 aa8.85□□□□□ -0.99
SEMA3D-203ENST00000463315 UBE2D1P51668 147 aa8.85□□□□□ -0.99
SEMA3D-203ENST00000463315 LINC01561Q8N1V8 128 aa8.85□□□□□ -0.99
SEMA3D-203ENST00000463315 SCGB3A1Q96QR1 104 aa8.85□□□□□ -0.99
SEMA3D-203ENST00000463315 APOBP04114 4563 aaKnown RBP8.85□□□□□ -0.99
SEMA3D-203ENST00000463315 HSPG2P98160 4391 aa8.84□□□□□ -0.99
SEMA3D-203ENST00000463315 A0A087WZ39 114 aa8.84□□□□□ -0.99
SEMA3D-203ENST00000463315 LINC01620Q4KN68 170 aa8.84□□□□□ -0.99
SEMA3D-203ENST00000463315 HIGD2BQ4VC39 106 aa8.84□□□□□ -0.99
SEMA3D-203ENST00000463315 LINC00242Q5T6M2 205 aa8.84□□□□□ -0.99
SEMA3D-203ENST00000463315 LINC00173Q6ZV60 143 aa8.84□□□□□ -0.99
SEMA3D-203ENST00000463315 OR10D4PQ8NGN7 298 aa8.84□□□□□ -0.99
SEMA3D-203ENST00000463315 CHAC1Q9BUX1 264 aa8.84□□□□□ -0.99
SEMA3D-203ENST00000463315 C5orf38Q86SI9 138 aa8.83□□□□□ -1
SEMA3D-203ENST00000463315 C2orf48Q96LS8 159 aa8.83□□□□□ -1
SEMA3D-203ENST00000463315 CIRBPQ14011 172 aaKnown RBP8.82□□□□□ -1
SEMA3D-203ENST00000463315 HERVK_113P63121 156 aa8.81□□□□□ -1
SEMA3D-203ENST00000463315 SYCNQ0VAF6 134 aa8.81□□□□□ -1
SEMA3D-203ENST00000463315 CHCHD1Q96BP2 118 aaKnown RBP8.81□□□□□ -1
SEMA3D-203ENST00000463315 URB1-AS1Q96HZ7 61 aa8.81□□□□□ -1
SEMA3D-203ENST00000463315 IGLV4-69A0A075B6H9 119 aa8.8□□□□□ -1
SEMA3D-203ENST00000463315 COLCA2A8K830 154 aa8.8□□□□□ -1
SEMA3D-203ENST00000463315 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.8□□□□□ -1
SEMA3D-203ENST00000463315 HBDP02042 147 aa8.8□□□□□ -1
SEMA3D-203ENST00000463315 CARD19Q96LW7 228 aa8.8□□□□□ -1
SEMA3D-203ENST00000463315 A0A096LNJ9 63 aa8.79□□□□□ -1
SEMA3D-203ENST00000463315 COX6A2Q02221 97 aa8.79□□□□□ -1
SEMA3D-203ENST00000463315 SPAG11BQ08648 103 aa8.79□□□□□ -1
SEMA3D-203ENST00000463315 PMVKQ15126 192 aa8.79□□□□□ -1
SEMA3D-203ENST00000463315 RNF151Q2KHN1 245 aa8.79□□□□□ -1
SEMA3D-203ENST00000463315 SCXQ7RTU7 201 aa8.79□□□□□ -1
SEMA3D-203ENST00000463315 LINC00474Q9P2X8 69 aa8.79□□□□□ -1
SEMA3D-203ENST00000463315 EPM2AB3EWF7 344 aa8.78□□□□□ -1
SEMA3D-203ENST00000463315 ATP5LO75964 103 aa8.78□□□□□ -1
SEMA3D-203ENST00000463315 TRGC2P03986 189 aa8.78□□□□□ -1
SEMA3D-203ENST00000463315 KRTAP19-1Q8IUB9 90 aa8.78□□□□□ -1
SEMA3D-203ENST00000463315 CIRBP-AS1Q8TBR5 109 aa8.78□□□□□ -1
SEMA3D-203ENST00000463315 ORAOV1Q8WV07 137 aa8.78□□□□□ -1
SEMA3D-203ENST00000463315 CAMK2N2Q96S95 79 aa8.78□□□□□ -1
SEMA3D-203ENST00000463315 CST9LQ9H4G1 147 aa8.78□□□□□ -1
SEMA3D-203ENST00000463315 GEMIN7Q9H840 131 aaKnown RBP8.78□□□□□ -1
SEMA3D-203ENST00000463315 TINCRA0A1B0GVN0 87 aa8.77□□□□□ -1.01
SEMA3D-203ENST00000463315 PDZD11Q5EBL8 140 aa8.77□□□□□ -1.01
SEMA3D-203ENST00000463315 LCE3BQ5TA77 95 aa8.77□□□□□ -1.01
SEMA3D-203ENST00000463315 ZC2HC1BQ5TFG8 222 aa8.77□□□□□ -1.01
SEMA3D-203ENST00000463315 MRPL35Q9NZE8 188 aaKnown RBP8.77□□□□□ -1.01
SEMA3D-203ENST00000463315 SRRM2Q9UQ35 2752 aaKnown RBP8.76□□□□□ -1.01
SEMA3D-203ENST00000463315 IGLV5-45A0A087WSX0 123 aa8.76□□□□□ -1.01
SEMA3D-203ENST00000463315 SPACA4Q8TDM5 124 aa8.76□□□□□ -1.01
SEMA3D-203ENST00000463315 LINC00526Q96FQ7 95 aa8.76□□□□□ -1.01
SEMA3D-203ENST00000463315 KRTAP17-1Q9BYP8 105 aa8.76□□□□□ -1.01
SEMA3D-203ENST00000463315 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.76□□□□□ -1.01
SEMA3D-203ENST00000463315 DNAH8Q96JB1 4490 aa8.76□□□□□ -1.01
SEMA3D-203ENST00000463315 A0A0J9YXV3 536 aa8.75□□□□□ -1.01
SEMA3D-203ENST00000463315 NDUFA1O15239 70 aa8.75□□□□□ -1.01
SEMA3D-203ENST00000463315 KIAA0087Q14695 138 aa8.75□□□□□ -1.01
SEMA3D-203ENST00000463315 Q6ZRU5 148 aa8.75□□□□□ -1.01
SEMA3D-203ENST00000463315 LOC107984640A0A0U1RRK4 108 aa8.74□□□□□ -1.01
SEMA3D-203ENST00000463315 SMR3BP02814 79 aaPredicted RBP8.74□□□□□ -1.01
SEMA3D-203ENST00000463315 Q5VSD8 79 aa8.74□□□□□ -1.01
SEMA3D-203ENST00000463315 BAGE3Q86Y29 109 aa8.74□□□□□ -1.01
SEMA3D-203ENST00000463315 CDKN2A-AS1Q9UH64 79 aa8.74□□□□□ -1.01
SEMA3D-203ENST00000463315 HSBP1O75506 76 aa8.73□□□□□ -1.01
SEMA3D-203ENST00000463315 HAMPP81172 84 aa8.73□□□□□ -1.01
SEMA3D-203ENST00000463315 Q8IZM0 81 aa8.73□□□□□ -1.01
SEMA3D-203ENST00000463315 PACRGQ96M98 296 aaPredicted RBP8.73□□□□□ -1.01
SEMA3D-203ENST00000463315 TRBV30A0A0K0K1B3 111 aa8.72□□□□□ -1.01
SEMA3D-203ENST00000463315 PANO1I0J062 215 aa8.72□□□□□ -1.01
SEMA3D-203ENST00000463315 PLA2G1BP04054 148 aaKnown RBP8.72□□□□□ -1.01
SEMA3D-203ENST00000463315 PRSS2P07478 247 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms