RNA–Protein interactions for RNA: ENST00000463184.1

VARS-221, Transcript of valyl-tRNA synthetase, humanhuman

TSL 2

Gene VARS, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-221ENST00000463184 ORMDL2Q53FV1 153 aa12.46□□□□□ -0.41
VARS-221ENST00000463184 TIMM21Q9BVV7 248 aa12.46□□□□□ -0.41
VARS-221ENST00000463184 UBE2D4Q9Y2X8 147 aa12.46□□□□□ -0.41
VARS-221ENST00000463184 CSDC2Q9Y534 153 aaKnown RBP12.46□□□□□ -0.41
VARS-221ENST00000463184 PRSS3P2Q8NHM4 247 aa12.45□□□□□ -0.42
VARS-221ENST00000463184 LINC01600Q96MT4 127 aa12.45□□□□□ -0.42
VARS-221ENST00000463184 RPL39P62891 51 aaKnown RBP12.44□□□□□ -0.42
VARS-221ENST00000463184 MAJINQ3KP22 176 aa12.44□□□□□ -0.42
VARS-221ENST00000463184 CDC42SE2Q9NRR3 84 aa12.44□□□□□ -0.42
VARS-221ENST00000463184 COLCA2A8K830 154 aa12.43□□□□□ -0.42
VARS-221ENST00000463184 ZNF664Q8N3J9 261 aa12.43□□□□□ -0.42
VARS-221ENST00000463184 SPANXA1Q9NS26 97 aa12.43□□□□□ -0.42
VARS-221ENST00000463184 LRP2P98164 4655 aa12.43□□□□□ -0.42
VARS-221ENST00000463184 IGKV3OR2-268A0A0C4DH90 116 aa12.42□□□□□ -0.42
VARS-221ENST00000463184 SCO1O75880 301 aa12.42□□□□□ -0.42
VARS-221ENST00000463184 HIGD2BQ4VC39 106 aa12.42□□□□□ -0.42
VARS-221ENST00000463184 IGKV2-24A0A0C4DH68 120 aa12.41□□□□□ -0.42
VARS-221ENST00000463184 LINC01546A6NGU7 62 aa12.41□□□□□ -0.42
VARS-221ENST00000463184 S100A1P23297 94 aa12.41□□□□□ -0.42
VARS-221ENST00000463184 G0S2P27469 103 aa12.41□□□□□ -0.42
VARS-221ENST00000463184 PRR3P79522 188 aaKnown RBP12.41□□□□□ -0.42
VARS-221ENST00000463184 STPG4Q8N801 248 aa12.41□□□□□ -0.42
VARS-221ENST00000463184 CHCHD10Q8WYQ3 142 aaPredicted RBP12.41□□□□□ -0.42
VARS-221ENST00000463184 C2orf66Q6UXQ4 117 aa12.4□□□□□ -0.42
VARS-221ENST00000463184 FA2HQ7L5A8 372 aa12.4□□□□□ -0.42
VARS-221ENST00000463184 C18orf32Q8TCD1 76 aa12.4□□□□□ -0.42
VARS-221ENST00000463184 CYSLTR1Q9Y271 337 aa12.4□□□□□ -0.42
VARS-221ENST00000463184 PYGO1Q9Y3Y4 419 aa12.4□□□□□ -0.42
VARS-221ENST00000463184 GVQW2A0A096LPI5 108 aaPredicted RBP12.39□□□□□ -0.43
VARS-221ENST00000463184 TRGC2P03986 189 aa12.38□□□□□ -0.43
VARS-221ENST00000463184 MRPS36P82909 103 aaKnown RBP12.38□□□□□ -0.43
VARS-221ENST00000463184 LINC00474Q9P2X8 69 aa12.38□□□□□ -0.43
VARS-221ENST00000463184 ATP6V1G1O75348 118 aa12.37□□□□□ -0.43
VARS-221ENST00000463184 Q6ZUT4 128 aa12.37□□□□□ -0.43
VARS-221ENST00000463184 A0A0J9YXV3 536 aa12.36□□□□□ -0.43
VARS-221ENST00000463184 LINC00959A0A1B0GUT2 108 aa12.36□□□□□ -0.43
VARS-221ENST00000463184 LINC00614P0C842 121 aa12.36□□□□□ -0.43
VARS-221ENST00000463184 RAB5BP61020 215 aa12.36□□□□□ -0.43
VARS-221ENST00000463184 SPINK6Q6UWN8 80 aa12.36□□□□□ -0.43
VARS-221ENST00000463184 FAM104AQ969W3 186 aa12.36□□□□□ -0.43
VARS-221ENST00000463184 PKIGQ9Y2B9 76 aa12.36□□□□□ -0.43
VARS-221ENST00000463184 A0A096LNI7 61 aa12.35□□□□□ -0.43
VARS-221ENST00000463184 LINC01549A6NIU2 74 aa12.35□□□□□ -0.43
VARS-221ENST00000463184 CCL25O15444 150 aa12.35□□□□□ -0.43
VARS-221ENST00000463184 SS18Q15532 418 aa12.35□□□□□ -0.43
VARS-221ENST00000463184 RNASE13Q5GAN3 156 aaKnown RBP12.35□□□□□ -0.43
VARS-221ENST00000463184 TOMM6Q96B49 74 aa12.35□□□□□ -0.43
VARS-221ENST00000463184 OPRPNQ99935 248 aaPredicted RBP12.35□□□□□ -0.43
VARS-221ENST00000463184 NPSP0C0P6 89 aa12.34□□□□□ -0.43
VARS-221ENST00000463184 FOXI1Q12951 378 aa12.34□□□□□ -0.43
VARS-221ENST00000463184 REG3GQ6UW15 175 aa12.34□□□□□ -0.43
VARS-221ENST00000463184 URB1-AS1Q96HZ7 61 aa12.34□□□□□ -0.43
VARS-221ENST00000463184 RNF213Q63HN8 5207 aa12.33□□□□□ -0.44
VARS-221ENST00000463184 IGLV4-3A0A075B6K6 122 aa12.33□□□□□ -0.44
VARS-221ENST00000463184 IGIPA6NJ69 53 aa12.33□□□□□ -0.44
VARS-221ENST00000463184 KRTAP10-8P60410 259 aa12.33□□□□□ -0.44
VARS-221ENST00000463184 TMEM141Q96I45 108 aa12.33□□□□□ -0.44
VARS-221ENST00000463184 C1orf196B1AJZ1 125 aa12.32□□□□□ -0.44
VARS-221ENST00000463184 TIMM17AQ99595 171 aa12.32□□□□□ -0.44
VARS-221ENST00000463184 TRAV13-1A0A0B4J241 112 aa12.31□□□□□ -0.44
VARS-221ENST00000463184 ODF1Q14990 250 aa12.31□□□□□ -0.44
VARS-221ENST00000463184 IGHV1-58A0A0C4DH39 117 aa12.3□□□□□ -0.44
VARS-221ENST00000463184 XCL1P47992 114 aa12.3□□□□□ -0.44
VARS-221ENST00000463184 Q6ZN92 141 aa12.3□□□□□ -0.44
VARS-221ENST00000463184 Q6ZRP5 223 aa12.3□□□□□ -0.44
VARS-221ENST00000463184 ERASQ7Z444 233 aa12.3□□□□□ -0.44
VARS-221ENST00000463184 SCGB3A1Q96QR1 104 aa12.3□□□□□ -0.44
VARS-221ENST00000463184 IFITM10A6NMD0 228 aa12.29□□□□□ -0.44
VARS-221ENST00000463184 SRSF9Q13242 221 aaKnown RBP eCLIP12.29□□□□□ -0.44
VARS-221ENST00000463184 PAPPA-AS1Q5QFB9 102 aa12.29□□□□□ -0.44
VARS-221ENST00000463184 CD164L2Q6UWJ8 174 aa12.29□□□□□ -0.44
VARS-221ENST00000463184 TEX43Q6ZNM6 134 aa12.29□□□□□ -0.44
VARS-221ENST00000463184 CHCHD1Q96BP2 118 aaKnown RBP12.29□□□□□ -0.44
VARS-221ENST00000463184 CARD19Q96LW7 228 aa12.29□□□□□ -0.44
VARS-221ENST00000463184 VCX2Q9H322 139 aa12.29□□□□□ -0.44
VARS-221ENST00000463184 BAGE3Q86Y29 109 aa12.28□□□□□ -0.44
VARS-221ENST00000463184 AMELXQ99217 191 aa12.28□□□□□ -0.44
VARS-221ENST00000463184 HBDP02042 147 aa12.27□□□□□ -0.45
VARS-221ENST00000463184 LINC00526Q96FQ7 95 aa12.27□□□□□ -0.45
VARS-221ENST00000463184 C2orf88Q9BSF0 95 aa12.27□□□□□ -0.45
VARS-221ENST00000463184 A0A096LNJ9 63 aa12.26□□□□□ -0.45
VARS-221ENST00000463184 ZNF561-AS1K7EIQ3 104 aa12.26□□□□□ -0.45
VARS-221ENST00000463184 SYCNQ0VAF6 134 aa12.25□□□□□ -0.45
VARS-221ENST00000463184 LINC00173Q6ZV60 143 aa12.25□□□□□ -0.45
VARS-221ENST00000463184 PMCHL1Q16048 86 aa12.24□□□□□ -0.45
VARS-221ENST00000463184 ZC2HC1BQ5TFG8 222 aa12.24□□□□□ -0.45
VARS-221ENST00000463184 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.23□□□□□ -0.45
VARS-221ENST00000463184 COX7A2LO14548 114 aa12.23□□□□□ -0.45
VARS-221ENST00000463184 UBE2D1P51668 147 aa12.23□□□□□ -0.45
VARS-221ENST00000463184 PTTG1IPP53801 180 aa12.23□□□□□ -0.45
VARS-221ENST00000463184 PDZD11Q5EBL8 140 aa12.23□□□□□ -0.45
VARS-221ENST00000463184 HSBP1O75506 76 aa12.22□□□□□ -0.45
VARS-221ENST00000463184 LINC00242Q5T6M2 205 aa12.22□□□□□ -0.45
VARS-221ENST00000463184 MALP21145 153 aa12.21□□□□□ -0.45
VARS-221ENST00000463184 FAM19A3Q7Z5A8 133 aa12.21□□□□□ -0.45
VARS-221ENST00000463184 IGHV3OR16-9A0A0B4J2B5 98 aa12.2□□□□□ -0.46
VARS-221ENST00000463184 LOC107984640A0A0U1RRK4 108 aa12.2□□□□□ -0.46
VARS-221ENST00000463184 SERF1AO75920 110 aa12.2□□□□□ -0.46
VARS-221ENST00000463184 ATP5LO75964 103 aa12.2□□□□□ -0.46
VARS-221ENST00000463184 GAGE2BQ13066 116 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 125.9 ms