RNA–Protein interactions for RNA: ENST00000463005.1

GARNL3-212, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2

Gene GARNL3, Length 887 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-212ENST00000463005 LELP1Q5T871 98 aa5.26□□□□□ -1.57
GARNL3-212ENST00000463005 NIT1Q86X76 327 aa5.26□□□□□ -1.57
GARNL3-212ENST00000463005 CHCHD1Q96BP2 118 aaKnown RBP5.26□□□□□ -1.57
GARNL3-212ENST00000463005 TMEM101Q96IK0 257 aa5.26□□□□□ -1.57
GARNL3-212ENST00000463005 Q9UF83 564 aa5.26□□□□□ -1.57
GARNL3-212ENST00000463005 CYSLTR1Q9Y271 337 aa5.26□□□□□ -1.57
GARNL3-212ENST00000463005 A0A087WX48 190 aa5.25□□□□□ -1.57
GARNL3-212ENST00000463005 TRBV6-8A0A0A6YYG3 113 aa5.25□□□□□ -1.57
GARNL3-212ENST00000463005 LINC01549A6NIU2 74 aa5.25□□□□□ -1.57
GARNL3-212ENST00000463005 USP17L23D6RBM5 183 aa5.25□□□□□ -1.57
GARNL3-212ENST00000463005 SERF1AO75920 110 aa5.25□□□□□ -1.57
GARNL3-212ENST00000463005 TSHBP01222 138 aa5.25□□□□□ -1.57
GARNL3-212ENST00000463005 HBDP02042 147 aa5.25□□□□□ -1.57
GARNL3-212ENST00000463005 S100A2P29034 98 aa5.25□□□□□ -1.57
GARNL3-212ENST00000463005 C10orf25Q5T742 122 aa5.25□□□□□ -1.57
GARNL3-212ENST00000463005 Q9HAA7 133 aa5.25□□□□□ -1.57
GARNL3-212ENST00000463005 UBR4Q5T4S7 5183 aa5.24□□□□□ -1.57
GARNL3-212ENST00000463005 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.24□□□□□ -1.57
GARNL3-212ENST00000463005 IGKV2-29A2NJV5 120 aaPredicted RBP5.24□□□□□ -1.57
GARNL3-212ENST00000463005 KRTAP10-4P60372 401 aaPredicted RBP5.24□□□□□ -1.57
GARNL3-212ENST00000463005 GAGE6Q13070 117 aa5.24□□□□□ -1.57
GARNL3-212ENST00000463005 C2orf66Q6UXQ4 117 aa5.24□□□□□ -1.57
GARNL3-212ENST00000463005 SCXQ7RTU7 201 aa5.24□□□□□ -1.57
GARNL3-212ENST00000463005 CHAC1Q9BUX1 264 aa5.24□□□□□ -1.57
GARNL3-212ENST00000463005 HMCN2Q8NDA2 5059 aa5.24□□□□□ -1.57
GARNL3-212ENST00000463005 DNAH8Q96JB1 4490 aa5.23□□□□□ -1.57
GARNL3-212ENST00000463005 TRAV8-3A0A0A6YYJ7 113 aa5.23□□□□□ -1.57
GARNL3-212ENST00000463005 H7C423 109 aa5.23□□□□□ -1.57
GARNL3-212ENST00000463005 CRPP02741 224 aa5.23□□□□□ -1.57
GARNL3-212ENST00000463005 PMCHL1Q16048 86 aa5.23□□□□□ -1.57
GARNL3-212ENST00000463005 PAPPA-AS1Q5QFB9 102 aa5.23□□□□□ -1.57
GARNL3-212ENST00000463005 LCE5AQ5TCM9 118 aa5.23□□□□□ -1.57
GARNL3-212ENST00000463005 Q6ZN92 141 aa5.23□□□□□ -1.57
GARNL3-212ENST00000463005 OR5A1Q8NGJ0 315 aa5.23□□□□□ -1.57
GARNL3-212ENST00000463005 SCGB3A1Q96QR1 104 aa5.23□□□□□ -1.57
GARNL3-212ENST00000463005 LRP1Q07954 4544 aaKnown RBP5.22□□□□□ -1.57
GARNL3-212ENST00000463005 IGHV3-30P01768 117 aa5.22□□□□□ -1.57
GARNL3-212ENST00000463005 IGHV3-33P01772 117 aa5.22□□□□□ -1.57
GARNL3-212ENST00000463005 ANGP03950 147 aaKnown RBP5.22□□□□□ -1.57
GARNL3-212ENST00000463005 IGHV3-30-3P0DP02 117 aa5.22□□□□□ -1.57
GARNL3-212ENST00000463005 IGHV3-30-5P0DP03 117 aa5.22□□□□□ -1.57
GARNL3-212ENST00000463005 FGF6P10767 208 aa5.22□□□□□ -1.57
GARNL3-212ENST00000463005 ZNF25P17030 456 aaPredicted RBP5.22□□□□□ -1.57
GARNL3-212ENST00000463005 PDZD11Q5EBL8 140 aa5.22□□□□□ -1.57
GARNL3-212ENST00000463005 NTM-AS1Q6ZSK4 140 aa5.22□□□□□ -1.57
GARNL3-212ENST00000463005 FAM19A2Q8N3H0 131 aa5.22□□□□□ -1.57
GARNL3-212ENST00000463005 Q8N976 141 aa5.22□□□□□ -1.57
GARNL3-212ENST00000463005 C20orf203Q8NBC4 194 aa5.22□□□□□ -1.57
GARNL3-212ENST00000463005 CHCHD7Q9BUK0 85 aa5.22□□□□□ -1.57
GARNL3-212ENST00000463005 SPANXA1Q9NS26 97 aa5.22□□□□□ -1.57
GARNL3-212ENST00000463005 HSPB8Q9UJY1 196 aa5.22□□□□□ -1.57
GARNL3-212ENST00000463005 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.21□□□□□ -1.58
GARNL3-212ENST00000463005 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.21□□□□□ -1.58
GARNL3-212ENST00000463005 ATP5LO75964 103 aa5.21□□□□□ -1.58
GARNL3-212ENST00000463005 LEPROTL1O95214 131 aa5.21□□□□□ -1.58
GARNL3-212ENST00000463005 ESDP10768 282 aa5.21□□□□□ -1.58
GARNL3-212ENST00000463005 FABP4P15090 132 aa5.21□□□□□ -1.58
GARNL3-212ENST00000463005 RPL39P62891 51 aaKnown RBP5.21□□□□□ -1.58
GARNL3-212ENST00000463005 WFDC2Q14508 124 aa5.21□□□□□ -1.58
GARNL3-212ENST00000463005 CIRBP-AS1Q8TBR5 109 aa5.21□□□□□ -1.58
GARNL3-212ENST00000463005 TOMM6Q96B49 74 aa5.21□□□□□ -1.58
GARNL3-212ENST00000463005 C2orf88Q9BSF0 95 aa5.21□□□□□ -1.58
GARNL3-212ENST00000463005 IGKV3OR2-268A0A0C4DH90 116 aa5.2□□□□□ -1.58
GARNL3-212ENST00000463005 LINC01546A6NGU7 62 aa5.2□□□□□ -1.58
GARNL3-212ENST00000463005 H0Y8G0 127 aa5.2□□□□□ -1.58
GARNL3-212ENST00000463005 SNRPEP62304 92 aaKnown RBP5.2□□□□□ -1.58
GARNL3-212ENST00000463005 MPV17L2Q567V2 206 aa5.2□□□□□ -1.58
GARNL3-212ENST00000463005 TEX43Q6ZNM6 134 aa5.2□□□□□ -1.58
GARNL3-212ENST00000463005 RMI2Q96E14 147 aa5.2□□□□□ -1.58
GARNL3-212ENST00000463005 URB1-AS1Q96HZ7 61 aa5.2□□□□□ -1.58
GARNL3-212ENST00000463005 TMEM141Q96I45 108 aa5.2□□□□□ -1.58
GARNL3-212ENST00000463005 LECT2O14960 151 aa5.19□□□□□ -1.58
GARNL3-212ENST00000463005 PRSS1P07477 247 aa5.19□□□□□ -1.58
GARNL3-212ENST00000463005 RBX1P62877 108 aa5.19□□□□□ -1.58
GARNL3-212ENST00000463005 COA6Q5JTJ3 125 aaKnown RBP5.19□□□□□ -1.58
GARNL3-212ENST00000463005 CLPSL2Q6UWE3 100 aa5.19□□□□□ -1.58
GARNL3-212ENST00000463005 ERASQ7Z444 233 aa5.19□□□□□ -1.58
GARNL3-212ENST00000463005 MRPL52Q86TS9 123 aaKnown RBP5.19□□□□□ -1.58
GARNL3-212ENST00000463005 BAALCQ8WXS3 180 aa5.19□□□□□ -1.58
GARNL3-212ENST00000463005 IFI27L1Q96BM0 104 aa5.19□□□□□ -1.58
GARNL3-212ENST00000463005 TIMM17AQ99595 171 aa5.19□□□□□ -1.58
GARNL3-212ENST00000463005 TIMM21Q9BVV7 248 aa5.19□□□□□ -1.58
GARNL3-212ENST00000463005 MAP1LC3CQ9BXW4 147 aa5.19□□□□□ -1.58
GARNL3-212ENST00000463005 VCX2Q9H322 139 aa5.19□□□□□ -1.58
GARNL3-212ENST00000463005 UBE2D4Q9Y2X8 147 aa5.19□□□□□ -1.58
GARNL3-212ENST00000463005 FAT3Q8TDW7 4589 aa5.18□□□□□ -1.58
GARNL3-212ENST00000463005 A0A1B0GUV1 79 aa5.18□□□□□ -1.58
GARNL3-212ENST00000463005 C20orf202A1L168 122 aa5.18□□□□□ -1.58
GARNL3-212ENST00000463005 IFITM10A6NMD0 228 aa5.18□□□□□ -1.58
GARNL3-212ENST00000463005 NUPR1O60356 82 aa5.18□□□□□ -1.58
GARNL3-212ENST00000463005 RPL37AP61513 92 aaKnown RBP5.18□□□□□ -1.58
GARNL3-212ENST00000463005 LINC01620Q4KN68 170 aa5.18□□□□□ -1.58
GARNL3-212ENST00000463005 RNASE13Q5GAN3 156 aaKnown RBP5.18□□□□□ -1.58
GARNL3-212ENST00000463005 Q6ZUT4 128 aa5.18□□□□□ -1.58
GARNL3-212ENST00000463005 ZNF664Q8N3J9 261 aa5.18□□□□□ -1.58
GARNL3-212ENST00000463005 KLK12Q9UKR0 248 aa5.18□□□□□ -1.58
GARNL3-212ENST00000463005 PYGO1Q9Y3Y4 419 aa5.18□□□□□ -1.58
GARNL3-212ENST00000463005 IGLV4-3A0A075B6K6 122 aa5.17□□□□□ -1.58
GARNL3-212ENST00000463005 KRTDAPP60985 99 aa5.17□□□□□ -1.58
GARNL3-212ENST00000463005 MRPS36P82909 103 aaKnown RBP5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms