RNA–Protein interactions for RNA: ENST00000462673.1

USP4-207, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 3

Gene USP4, Length 709 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-207ENST00000462673 TMEM170BQ5T4T1 132 aa5.53□□□□□ -1.52
USP4-207ENST00000462673 SFTA2Q6UW10 78 aa5.53□□□□□ -1.52
USP4-207ENST00000462673 C14orf178Q8N769 122 aaPredicted RBP5.53□□□□□ -1.52
USP4-207ENST00000462673 GAGE2DQ9UEU5 116 aa5.53□□□□□ -1.52
USP4-207ENST00000462673 SS18L2Q9UHA2 77 aa5.53□□□□□ -1.52
USP4-207ENST00000462673 TRGV1A0A0A0MS02 117 aa5.52□□□□□ -1.53
USP4-207ENST00000462673 TRBV6-5A0A0K0K1A5 114 aa5.52□□□□□ -1.53
USP4-207ENST00000462673 IGIPA6NJ69 53 aa5.52□□□□□ -1.53
USP4-207ENST00000462673 H3BT86 120 aa5.52□□□□□ -1.53
USP4-207ENST00000462673 VCYO14598 125 aa5.52□□□□□ -1.53
USP4-207ENST00000462673 GNRH2O43555 120 aa5.52□□□□□ -1.53
USP4-207ENST00000462673 CRYGDP07320 174 aa5.52□□□□□ -1.53
USP4-207ENST00000462673 NDUFV3P56181 108 aaKnown RBP5.52□□□□□ -1.53
USP4-207ENST00000462673 LINC01620Q4KN68 170 aa5.52□□□□□ -1.53
USP4-207ENST00000462673 SUMO4Q6EEV6 95 aa5.52□□□□□ -1.53
USP4-207ENST00000462673 TRBV10-2A0A0K0K1G8 114 aa5.51□□□□□ -1.53
USP4-207ENST00000462673 FAM240AA0A1B0GVK7 77 aa5.51□□□□□ -1.53
USP4-207ENST00000462673 TMEM223A0PJW6 202 aa5.51□□□□□ -1.53
USP4-207ENST00000462673 A4D1N5 150 aa5.51□□□□□ -1.53
USP4-207ENST00000462673 F5H768 121 aa5.51□□□□□ -1.53
USP4-207ENST00000462673 GAGE7O76087 117 aa5.51□□□□□ -1.53
USP4-207ENST00000462673 TSHBP01222 138 aa5.51□□□□□ -1.53
USP4-207ENST00000462673 GAGE12FP0CL80 117 aa5.51□□□□□ -1.53
USP4-207ENST00000462673 GAGE12GP0CL81 117 aa5.51□□□□□ -1.53
USP4-207ENST00000462673 GAGE12IP0CL82 117 aa5.51□□□□□ -1.53
USP4-207ENST00000462673 IFITM1P13164 125 aa5.51□□□□□ -1.53
USP4-207ENST00000462673 POLR2KP53803 58 aaKnown RBP5.51□□□□□ -1.53
USP4-207ENST00000462673 TTC32Q5I0X7 151 aa5.51□□□□□ -1.53
USP4-207ENST00000462673 Q6ZTC4 211 aa5.51□□□□□ -1.53
USP4-207ENST00000462673 C15orf53Q8NAA6 179 aa5.51□□□□□ -1.53
USP4-207ENST00000462673 C11orf72Q8NBR9 251 aa5.51□□□□□ -1.53
USP4-207ENST00000462673 NTN5Q8WTR8 489 aaPredicted RBP5.51□□□□□ -1.53
USP4-207ENST00000462673 AMELXQ99217 191 aa5.51□□□□□ -1.53
USP4-207ENST00000462673 MDFICQ9P1T7 246 aa5.51□□□□□ -1.53
USP4-207ENST00000462673 COL7A1Q02388 2944 aa5.51□□□□□ -1.53
USP4-207ENST00000462673 TGP01266 2768 aa5.5□□□□□ -1.53
USP4-207ENST00000462673 IGHV3-16A0A0C4DH30 117 aa5.5□□□□□ -1.53
USP4-207ENST00000462673 TRBV30A0A0K0K1B3 111 aa5.5□□□□□ -1.53
USP4-207ENST00000462673 TRBV27A0A0K0K1C4 114 aa5.5□□□□□ -1.53
USP4-207ENST00000462673 PLAC8L1A1L4L8 177 aa5.5□□□□□ -1.53
USP4-207ENST00000462673 GAGE12JA6NER3 117 aa5.5□□□□□ -1.53
USP4-207ENST00000462673 H3BNG1 76 aa5.5□□□□□ -1.53
USP4-207ENST00000462673 PRM2P04554 102 aa5.5□□□□□ -1.53
USP4-207ENST00000462673 RNASE3P12724 160 aaKnown RBP5.5□□□□□ -1.53
USP4-207ENST00000462673 HTN3P15516 51 aa5.5□□□□□ -1.53
USP4-207ENST00000462673 GAGE4Q13068 117 aa5.5□□□□□ -1.53
USP4-207ENST00000462673 KIF25-AS1Q9Y6Z4 181 aa5.5□□□□□ -1.53
USP4-207ENST00000462673 TRGV4A0A0C4DH28 118 aa5.49□□□□□ -1.53
USP4-207ENST00000462673 B5MCH6 92 aa5.49□□□□□ -1.53
USP4-207ENST00000462673 COX6CP09669 75 aa5.49□□□□□ -1.53
USP4-207ENST00000462673 ZNF22P17026 224 aaPredicted RBP5.49□□□□□ -1.53
USP4-207ENST00000462673 RPL39P62891 51 aaKnown RBP5.49□□□□□ -1.53
USP4-207ENST00000462673 Q6ZTI0 123 aa5.49□□□□□ -1.53
USP4-207ENST00000462673 LINC00612Q8N6U2 182 aa5.49□□□□□ -1.53
USP4-207ENST00000462673 SPANXDQ9BXN6 97 aa5.49□□□□□ -1.53
USP4-207ENST00000462673 SPANXCQ9NY87 97 aa5.49□□□□□ -1.53
USP4-207ENST00000462673 PRO0255Q9UI72 69 aa5.49□□□□□ -1.53
USP4-207ENST00000462673 CELA1Q9UNI1 258 aa5.49□□□□□ -1.53
USP4-207ENST00000462673 PRKDCP78527 4128 aaKnown RBP5.48□□□□□ -1.53
USP4-207ENST00000462673 DNAH9Q9NYC9 4486 aa5.48□□□□□ -1.53
USP4-207ENST00000462673 TRAV4A0A0B4J268 109 aa5.48□□□□□ -1.53
USP4-207ENST00000462673 F5H697 171 aa5.48□□□□□ -1.53
USP4-207ENST00000462673 ZNF56Q15929 161 aa5.48□□□□□ -1.53
USP4-207ENST00000462673 CFAP161Q6P656 301 aa5.48□□□□□ -1.53
USP4-207ENST00000462673 Q6ZQT7 251 aa5.48□□□□□ -1.53
USP4-207ENST00000462673 ZNRF2Q8NHG8 242 aa5.48□□□□□ -1.53
USP4-207ENST00000462673 TIMM21Q9BVV7 248 aa5.48□□□□□ -1.53
USP4-207ENST00000462673 ICOSQ9Y6W8 199 aa5.48□□□□□ -1.53
USP4-207ENST00000462673 H7C2G1 150 aa5.47□□□□□ -1.53
USP4-207ENST00000462673 PAX4O43316 350 aa5.47□□□□□ -1.53
USP4-207ENST00000462673 TRIAP1O43715 76 aa5.47□□□□□ -1.53
USP4-207ENST00000462673 CCL18P55774 89 aa5.47□□□□□ -1.53
USP4-207ENST00000462673 LINC00315P59091 139 aa5.47□□□□□ -1.53
USP4-207ENST00000462673 C2orf82Q6UX34 121 aa5.47□□□□□ -1.53
USP4-207ENST00000462673 C9orf85Q96MD7 179 aa5.47□□□□□ -1.53
USP4-207ENST00000462673 IGLV4-3A0A075B6K6 122 aa5.46□□□□□ -1.54
USP4-207ENST00000462673 A0A0J9YXY3 114 aa5.46□□□□□ -1.54
USP4-207ENST00000462673 TRBV7-7A0A0K0K1E9 115 aa5.46□□□□□ -1.54
USP4-207ENST00000462673 MIAQ16674 131 aa5.46□□□□□ -1.54
USP4-207ENST00000462673 MUSTN1Q8IVN3 82 aa5.46□□□□□ -1.54
USP4-207ENST00000462673 TMEM101Q96IK0 257 aa5.46□□□□□ -1.54
USP4-207ENST00000462673 TRBV6-4A0A1B0GX49 114 aa5.45□□□□□ -1.54
USP4-207ENST00000462673 CCDC179H3BU77 68 aa5.45□□□□□ -1.54
USP4-207ENST00000462673 I3L3M4 83 aa5.45□□□□□ -1.54
USP4-207ENST00000462673 LST1O00453 97 aa5.45□□□□□ -1.54
USP4-207ENST00000462673 RS1O15537 224 aa5.45□□□□□ -1.54
USP4-207ENST00000462673 EIF4EBP3O60516 100 aaPredicted RBP5.45□□□□□ -1.54
USP4-207ENST00000462673 TIMM17BO60830 172 aa5.45□□□□□ -1.54
USP4-207ENST00000462673 FAM74A4Q5TZK3 123 aa5.45□□□□□ -1.54
USP4-207ENST00000462673 C20orf203Q8NBC4 194 aa5.45□□□□□ -1.54
USP4-207ENST00000462673 TMEM126AQ9H061 195 aa5.45□□□□□ -1.54
USP4-207ENST00000462673 APLNQ9ULZ1 77 aa5.45□□□□□ -1.54
USP4-207ENST00000462673 HUWE1Q7Z6Z7 4374 aaKnown RBP5.45□□□□□ -1.54
USP4-207ENST00000462673 A0A087WWL8 130 aa5.44□□□□□ -1.54
USP4-207ENST00000462673 LY6G6CO95867 125 aa5.44□□□□□ -1.54
USP4-207ENST00000462673 IGHV3-53P01767 116 aa5.44□□□□□ -1.54
USP4-207ENST00000462673 ACYP1P07311 99 aa5.44□□□□□ -1.54
USP4-207ENST00000462673 IGHV3-30-3P0DP02 117 aa5.44□□□□□ -1.54
USP4-207ENST00000462673 FHL2Q14192 279 aa5.44□□□□□ -1.54
USP4-207ENST00000462673 UBE2DNLQ8IWF7 75 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 92 ms