RNA–Protein interactions for RNA: ENST00000462429.1

VPS41-210, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 3

Gene VPS41, Length 347 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-210ENST00000462429 DOPEY1Q5JWR5 2465 aa1.9□□□□□ -2.11
VPS41-210ENST00000462429 A0A096LNT2 108 aa1.9□□□□□ -2.11
VPS41-210ENST00000462429 M0R143 59 aa1.9□□□□□ -2.11
VPS41-210ENST00000462429 ZNF73O43830 326 aaPredicted RBP1.9□□□□□ -2.11
VPS41-210ENST00000462429 HBDP02042 147 aa1.9□□□□□ -2.11
VPS41-210ENST00000462429 ARMS2P0C7Q2 107 aa1.9□□□□□ -2.11
VPS41-210ENST00000462429 IGLC6P0CF74 106 aa1.9□□□□□ -2.11
VPS41-210ENST00000462429 TSPEAR-AS2P59090 65 aa1.9□□□□□ -2.11
VPS41-210ENST00000462429 LINC00322Q6ZN03 302 aaPredicted RBP1.9□□□□□ -2.11
VPS41-210ENST00000462429 FOXI2Q6ZQN5 318 aa1.9□□□□□ -2.11
VPS41-210ENST00000462429 SPATA12Q7Z6I5 190 aa1.9□□□□□ -2.11
VPS41-210ENST00000462429 DYNLRB2Q8TF09 96 aa1.9□□□□□ -2.11
VPS41-210ENST00000462429 AP1S3Q96PC3 154 aa1.9□□□□□ -2.11
VPS41-210ENST00000462429 C20orf78Q9BR46 151 aa1.9□□□□□ -2.11
VPS41-210ENST00000462429 MIEN1Q9BRT3 115 aa1.9□□□□□ -2.11
VPS41-210ENST00000462429 DPH3P1Q9H4G8 78 aa1.9□□□□□ -2.11
VPS41-210ENST00000462429 C16orf95Q9H693 158 aa1.9□□□□□ -2.11
VPS41-210ENST00000462429 ST20Q9HBF5 79 aa1.9□□□□□ -2.11
VPS41-210ENST00000462429 PKD1L2Q7Z442 2459 aa1.9□□□□□ -2.11
VPS41-210ENST00000462429 AKAP6Q13023 2319 aa1.89□□□□□ -2.11
VPS41-210ENST00000462429 CHD8Q9HCK8 2581 aa1.89□□□□□ -2.11
VPS41-210ENST00000462429 IGKV3-7A0A075B6H7 116 aa1.89□□□□□ -2.11
VPS41-210ENST00000462429 TMSB15BA0A087X1C1 80 aa1.89□□□□□ -2.11
VPS41-210ENST00000462429 C7orf71A4D174 169 aa1.89□□□□□ -2.11
VPS41-210ENST00000462429 C2orf70A6NJV1 201 aa1.89□□□□□ -2.11
VPS41-210ENST00000462429 D6R8Y8 96 aa1.89□□□□□ -2.11
VPS41-210ENST00000462429 SYS1-DBNDD2H3BUS1 97 aa1.89□□□□□ -2.11
VPS41-210ENST00000462429 CD7P09564 240 aa1.89□□□□□ -2.11
VPS41-210ENST00000462429 C3orf79P0CE67 100 aa1.89□□□□□ -2.11
VPS41-210ENST00000462429 FCER1GP30273 86 aa1.89□□□□□ -2.11
VPS41-210ENST00000462429 RNASE4P34096 147 aaKnown RBP1.89□□□□□ -2.11
VPS41-210ENST00000462429 CRIP1P50238 77 aa1.89□□□□□ -2.11
VPS41-210ENST00000462429 TDRG1Q3Y452 100 aa1.89□□□□□ -2.11
VPS41-210ENST00000462429 SPATA45Q537H7 98 aa1.89□□□□□ -2.11
VPS41-210ENST00000462429 FAM19A2Q8N3H0 131 aa1.89□□□□□ -2.11
VPS41-210ENST00000462429 DEFB125Q8N687 156 aa1.89□□□□□ -2.11
VPS41-210ENST00000462429 Q8N8P6 123 aa1.89□□□□□ -2.11
VPS41-210ENST00000462429 Q8TAT8 98 aa1.89□□□□□ -2.11
VPS41-210ENST00000462429 DCANP1Q8TF63 244 aa1.89□□□□□ -2.11
VPS41-210ENST00000462429 UPK3BQ9BT76 320 aa1.89□□□□□ -2.11
VPS41-210ENST00000462429 LAMA5O15230 3695 aa1.89□□□□□ -2.11
VPS41-210ENST00000462429 SPG11Q96JI7 2443 aa1.88□□□□□ -2.11
VPS41-210ENST00000462429 BSNQ9UPA5 3926 aa1.88□□□□□ -2.11
VPS41-210ENST00000462429 IGHV1-24A0A0C4DH33 117 aa1.88□□□□□ -2.11
VPS41-210ENST00000462429 A0A0J9YX75 114 aa1.88□□□□□ -2.11
VPS41-210ENST00000462429 A8MWV9 139 aa1.88□□□□□ -2.11
VPS41-210ENST00000462429 OR11H12B2RN74 326 aa1.88□□□□□ -2.11
VPS41-210ENST00000462429 H3BVH4 76 aa1.88□□□□□ -2.11
VPS41-210ENST00000462429 UBE2L6O14933 153 aa1.88□□□□□ -2.11
VPS41-210ENST00000462429 IGHV3-30-3P0DP02 117 aa1.88□□□□□ -2.11
VPS41-210ENST00000462429 EVI2AP22794 236 aa1.88□□□□□ -2.11
VPS41-210ENST00000462429 PLNP26678 52 aa1.88□□□□□ -2.11
VPS41-210ENST00000462429 IFI27P40305 119 aaPredicted RBP1.88□□□□□ -2.11
VPS41-210ENST00000462429 INSL3P51460 131 aa1.88□□□□□ -2.11
VPS41-210ENST00000462429 LGALS9BQ3B8N2 356 aa1.88□□□□□ -2.11
VPS41-210ENST00000462429 TMEM97Q5BJF2 176 aa1.88□□□□□ -2.11
VPS41-210ENST00000462429 COL5A1-AS1Q5SY13 56 aa1.88□□□□□ -2.11
VPS41-210ENST00000462429 C1orf195Q5TG92 126 aa1.88□□□□□ -2.11
VPS41-210ENST00000462429 LINC01545Q5VT33 79 aa1.88□□□□□ -2.11
VPS41-210ENST00000462429 LGALS9CQ6DKI2 356 aa1.88□□□□□ -2.11
VPS41-210ENST00000462429 DAND5Q8N907 189 aa1.88□□□□□ -2.11
VPS41-210ENST00000462429 ZCCHC13Q8WW36 166 aaKnown RBP1.88□□□□□ -2.11
VPS41-210ENST00000462429 IFI27L1Q96BM0 104 aa1.88□□□□□ -2.11
VPS41-210ENST00000462429 C20orf166-AS1Q96NR2 134 aa1.88□□□□□ -2.11
VPS41-210ENST00000462429 TIMM8BQ9Y5J9 83 aaPredicted RBP1.88□□□□□ -2.11
VPS41-210ENST00000462429 FAM208BQ5VWN6 2430 aa1.87□□□□□ -2.11
VPS41-210ENST00000462429 IGHV3-73A0A0B4J1V6 119 aa1.87□□□□□ -2.11
VPS41-210ENST00000462429 TRAV12-3A0A0B4J271 114 aa1.87□□□□□ -2.11
VPS41-210ENST00000462429 LINC01546A6NGU7 62 aa1.87□□□□□ -2.11
VPS41-210ENST00000462429 LINC00587B1AMM8 73 aa1.87□□□□□ -2.11
VPS41-210ENST00000462429 DLEU1O43261 78 aa1.87□□□□□ -2.11
VPS41-210ENST00000462429 NUPR1O60356 82 aa1.87□□□□□ -2.11
VPS41-210ENST00000462429 IGKCP01834 107 aa1.87□□□□□ -2.11
VPS41-210ENST00000462429 MGPP08493 103 aa1.87□□□□□ -2.11
VPS41-210ENST00000462429 HLA-DRB4P13762 266 aa1.87□□□□□ -2.11
VPS41-210ENST00000462429 HLA-DMBP28068 263 aa1.87□□□□□ -2.11
VPS41-210ENST00000462429 ZNF80P51504 273 aaPredicted RBP1.87□□□□□ -2.11
VPS41-210ENST00000462429 CRYBA4P53673 196 aa1.87□□□□□ -2.11
VPS41-210ENST00000462429 DEFB131AP59861 70 aa1.87□□□□□ -2.11
VPS41-210ENST00000462429 GDF5OSQ5U4N7 250 aa1.87□□□□□ -2.11
VPS41-210ENST00000462429 CSPG4Q6UVK1 2322 aa1.87□□□□□ -2.11
VPS41-210ENST00000462429 NDUFA11Q86Y39 141 aa1.87□□□□□ -2.11
VPS41-210ENST00000462429 WFDC11Q8NEX6 87 aa1.87□□□□□ -2.11
VPS41-210ENST00000462429 NBEAQ8NFP9 2946 aa1.87□□□□□ -2.11
VPS41-210ENST00000462429 PTH2Q96A98 100 aa1.87□□□□□ -2.11
VPS41-210ENST00000462429 TMEM141Q96I45 108 aa1.87□□□□□ -2.11
VPS41-210ENST00000462429 DNAJC30Q96LL9 226 aa1.87□□□□□ -2.11
VPS41-210ENST00000462429 SCGB3A1Q96QR1 104 aa1.87□□□□□ -2.11
VPS41-210ENST00000462429 LINC00467Q9BRT7 94 aa1.87□□□□□ -2.11
VPS41-210ENST00000462429 C2orf88Q9BSF0 95 aa1.87□□□□□ -2.11
VPS41-210ENST00000462429 PRO1933Q9H354 126 aa1.87□□□□□ -2.11
VPS41-210ENST00000462429 CYSLTR1Q9Y271 337 aa1.87□□□□□ -2.11
VPS41-210ENST00000462429 HLA-DRB4X5D2U9 266 aa1.87□□□□□ -2.11
VPS41-210ENST00000462429 HIVEP2P31629 2446 aa1.87□□□□□ -2.11
VPS41-210ENST00000462429 ANKRD17O75179 2603 aaKnown RBP1.86□□□□□ -2.11
VPS41-210ENST00000462429 TRAV12-1A0A0B4J245 112 aa1.86□□□□□ -2.11
VPS41-210ENST00000462429 MUC21A0A0G2JKD1 596 aa1.86□□□□□ -2.11
VPS41-210ENST00000462429 TRBV6-5A0A0K0K1A5 114 aa1.86□□□□□ -2.11
VPS41-210ENST00000462429 MUC21A0A140T8X8 626 aa1.86□□□□□ -2.11
VPS41-210ENST00000462429 F8VRH5 84 aa1.86□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms