RNA–Protein interactions for RNA: ENST00000461990.1

LINC01140-201, Transcript of long intergenic non-protein coding RNA 1140, humanhuman

TSL 1 (best) BASIC

Gene LINC01140, Length 3,181 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01140-201ENST00000461990 SPTBN4Q9H254 2564 aa6.51□□□□□ -1.37
LINC01140-201ENST00000461990 BSPH1Q075Z2 132 aa6.5□□□□□ -1.37
LINC01140-201ENST00000461990 Q8N814 137 aa6.5□□□□□ -1.37
LINC01140-201ENST00000461990 E7EQL1 145 aa6.5□□□□□ -1.37
LINC01140-201ENST00000461990 CCL18P55774 89 aa6.49□□□□□ -1.37
LINC01140-201ENST00000461990 NREPQ16612 68 aa6.49□□□□□ -1.37
LINC01140-201ENST00000461990 PIEZO2Q9H5I5 2752 aa6.49□□□□□ -1.37
LINC01140-201ENST00000461990 Q6ZVQ6 151 aa6.49□□□□□ -1.37
LINC01140-201ENST00000461990 ATMQ13315 3056 aa6.49□□□□□ -1.37
LINC01140-201ENST00000461990 TRBV6-4A0A1B0GX49 114 aa6.49□□□□□ -1.37
LINC01140-201ENST00000461990 Q8N3U1 123 aa6.49□□□□□ -1.37
LINC01140-201ENST00000461990 MGAQ8IWI9 3026 aa6.48□□□□□ -1.37
LINC01140-201ENST00000461990 PRYO14603 147 aa6.48□□□□□ -1.37
LINC01140-201ENST00000461990 C6orf223Q8N319 242 aa6.48□□□□□ -1.37
LINC01140-201ENST00000461990 SPTA1P02549 2419 aa6.48□□□□□ -1.37
LINC01140-201ENST00000461990 DMXL1Q9Y485 3027 aa6.48□□□□□ -1.37
LINC01140-201ENST00000461990 G3V318 75 aa6.48□□□□□ -1.37
LINC01140-201ENST00000461990 K7EQG2 157 aa6.48□□□□□ -1.37
LINC01140-201ENST00000461990 FUSP35637 526 aaKnown RBP eCLIP6.48□□□□□ -1.37
LINC01140-201ENST00000461990 Q6ZTI0 123 aa6.48□□□□□ -1.37
LINC01140-201ENST00000461990 PKDREJQ9NTG1 2253 aa6.48□□□□□ -1.37
LINC01140-201ENST00000461990 DMXL2Q8TDJ6 3036 aa6.47□□□□□ -1.37
LINC01140-201ENST00000461990 hDV103S1A0JD37 113 aa6.47□□□□□ -1.37
LINC01140-201ENST00000461990 ATP1A1-AS1Q5TC04 95 aa6.47□□□□□ -1.37
LINC01140-201ENST00000461990 PROK1P58294 105 aa6.47□□□□□ -1.37
LINC01140-201ENST00000461990 C9orf66Q5T8R8 295 aa6.47□□□□□ -1.37
LINC01140-201ENST00000461990 DAD1P61803 113 aa6.47□□□□□ -1.37
LINC01140-201ENST00000461990 DGAT2L7PQ6IED9 249 aa6.47□□□□□ -1.37
LINC01140-201ENST00000461990 C11orf68Q9H3H3 251 aaKnown RBP6.47□□□□□ -1.37
LINC01140-201ENST00000461990 PDE6GP18545 87 aa6.46□□□□□ -1.38
LINC01140-201ENST00000461990 KMT2BQ9UMN6 2715 aaPredicted RBP6.46□□□□□ -1.38
LINC01140-201ENST00000461990 MRPL55Q7Z7F7 128 aaKnown RBP6.46□□□□□ -1.38
LINC01140-201ENST00000461990 K7EQD1 137 aa6.45□□□□□ -1.38
LINC01140-201ENST00000461990 IGHV3-53P01767 116 aa6.45□□□□□ -1.38
LINC01140-201ENST00000461990 Q6ZRP5 223 aa6.45□□□□□ -1.38
LINC01140-201ENST00000461990 STHQ8IWL8 128 aa6.45□□□□□ -1.38
LINC01140-201ENST00000461990 COX7B2Q8TF08 81 aa6.45□□□□□ -1.38
LINC01140-201ENST00000461990 RHPN1-AS1Q9BWJ2 59 aa6.45□□□□□ -1.38
LINC01140-201ENST00000461990 Q6ZSN1 163 aa6.45□□□□□ -1.38
LINC01140-201ENST00000461990 Q9UF83 564 aa6.45□□□□□ -1.38
LINC01140-201ENST00000461990 ZFHX3Q15911 3703 aa6.45□□□□□ -1.38
LINC01140-201ENST00000461990 A0A096LNT2 108 aa6.45□□□□□ -1.38
LINC01140-201ENST00000461990 FDCSPQ8NFU4 85 aa6.45□□□□□ -1.38
LINC01140-201ENST00000461990 A0A087WZ39 114 aa6.44□□□□□ -1.38
LINC01140-201ENST00000461990 BPY2O14599 106 aa6.44□□□□□ -1.38
LINC01140-201ENST00000461990 HAMPP81172 84 aa6.44□□□□□ -1.38
LINC01140-201ENST00000461990 ABCA4P78363 2273 aa6.44□□□□□ -1.38
LINC01140-201ENST00000461990 IGHV3-73A0A0B4J1V6 119 aa6.43□□□□□ -1.38
LINC01140-201ENST00000461990 OCR1Q9BZK8 76 aa6.43□□□□□ -1.38
LINC01140-201ENST00000461990 K7EMT4 169 aa6.43□□□□□ -1.38
LINC01140-201ENST00000461990 NANOS2P60321 138 aaKnown RBP6.43□□□□□ -1.38
LINC01140-201ENST00000461990 LCE2DQ5TA82 110 aaPredicted RBP6.43□□□□□ -1.38
LINC01140-201ENST00000461990 BBC3Q96PG8 261 aaPredicted RBP6.43□□□□□ -1.38
LINC01140-201ENST00000461990 CDC42SE2Q9NRR3 84 aa6.43□□□□□ -1.38
LINC01140-201ENST00000461990 SMG1Q96Q15 3661 aaKnown RBP6.43□□□□□ -1.38
LINC01140-201ENST00000461990 TRBV10-1A0A0K0K1A3 114 aa6.43□□□□□ -1.38
LINC01140-201ENST00000461990 LINC00158P58513 81 aa6.43□□□□□ -1.38
LINC01140-201ENST00000461990 KTN1-AS1Q86SY8 53 aa6.43□□□□□ -1.38
LINC01140-201ENST00000461990 C5orf56Q8N8D9 126 aa6.43□□□□□ -1.38
LINC01140-201ENST00000461990 MED13LQ71F56 2210 aa6.42□□□□□ -1.38
LINC01140-201ENST00000461990 LYNX1G3V0Z9 82 aa6.42□□□□□ -1.38
LINC01140-201ENST00000461990 IGHV4-38-2P0DP08 117 aa6.42□□□□□ -1.38
LINC01140-201ENST00000461990 LYNX1P0DP58 116 aa6.42□□□□□ -1.38
LINC01140-201ENST00000461990 NTM-AS1Q6ZSK4 140 aa6.42□□□□□ -1.38
LINC01140-201ENST00000461990 C11orf44Q8N8P7 122 aa6.42□□□□□ -1.38
LINC01140-201ENST00000461990 LYRM9A8MSI8 78 aa6.42□□□□□ -1.38
LINC01140-201ENST00000461990 H3BQ85 93 aa6.42□□□□□ -1.38
LINC01140-201ENST00000461990 H3BUA1 57 aa6.42□□□□□ -1.38
LINC01140-201ENST00000461990 ACACAQ13085 2346 aa6.42□□□□□ -1.38
LINC01140-201ENST00000461990 KHDC1LQ5JSQ8 128 aa6.42□□□□□ -1.38
LINC01140-201ENST00000461990 USMG5Q96IX5 58 aa6.42□□□□□ -1.38
LINC01140-201ENST00000461990 PTPRQQ9UMZ3 2332 aa6.41□□□□□ -1.38
LINC01140-201ENST00000461990 RBM12B-AS1Q9P1G2 102 aa6.41□□□□□ -1.38
LINC01140-201ENST00000461990 M0R2N4 97 aa6.41□□□□□ -1.38
LINC01140-201ENST00000461990 ADGRG4Q8IZF6 3080 aa6.4□□□□□ -1.38
LINC01140-201ENST00000461990 SPTAN1Q13813 2472 aaKnown RBP6.4□□□□□ -1.38
LINC01140-201ENST00000461990 SPINK13Q1W4C9 94 aa6.4□□□□□ -1.38
LINC01140-201ENST00000461990 WNK2Q9Y3S1 2297 aa6.4□□□□□ -1.38
LINC01140-201ENST00000461990 SPENQ96T58 3664 aaKnown RBP6.4□□□□□ -1.39
LINC01140-201ENST00000461990 IGKV3-7A0A075B6H7 116 aa6.4□□□□□ -1.39
LINC01140-201ENST00000461990 LCE6AA0A183 80 aa6.4□□□□□ -1.39
LINC01140-201ENST00000461990 IGHV4-31P0DP07 118 aa6.4□□□□□ -1.39
LINC01140-201ENST00000461990 LINC00588Q9Y4M8 146 aa6.4□□□□□ -1.39
LINC01140-201ENST00000461990 GNLYP22749 145 aa6.39□□□□□ -1.39
LINC01140-201ENST00000461990 LMO4P61968 165 aa6.39□□□□□ -1.39
LINC01140-201ENST00000461990 ZNF843Q8N446 348 aa6.39□□□□□ -1.39
LINC01140-201ENST00000461990 AKAP6Q13023 2319 aa6.39□□□□□ -1.39
LINC01140-201ENST00000461990 NCOR2Q9Y618 2525 aa6.39□□□□□ -1.39
LINC01140-201ENST00000461990 LY6HO94772 140 aa6.39□□□□□ -1.39
LINC01140-201ENST00000461990 CACNA1BQ00975 2339 aa6.38□□□□□ -1.39
LINC01140-201ENST00000461990 TRAV22A0A0B4J277 110 aa6.38□□□□□ -1.39
LINC01140-201ENST00000461990 LINC00575Q6W349 94 aa6.38□□□□□ -1.39
LINC01140-201ENST00000461990 TACC2O95359 2948 aa6.38□□□□□ -1.39
LINC01140-201ENST00000461990 A8MTW9 85 aa6.38□□□□□ -1.39
LINC01140-201ENST00000461990 UBE2BP63146 152 aa6.38□□□□□ -1.39
LINC01140-201ENST00000461990 CD164L2Q6UWJ8 174 aa6.37□□□□□ -1.39
LINC01140-201ENST00000461990 SPTBN1Q01082 2364 aaKnown RBP6.37□□□□□ -1.39
LINC01140-201ENST00000461990 CSMD1Q96PZ7 3565 aa6.37□□□□□ -1.39
LINC01140-201ENST00000461990 C1orf64Q8NEQ6 169 aa6.37□□□□□ -1.39
LINC01140-201ENST00000461990 GRNP28799 593 aaKnown RBP6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 91.9 ms