RNA–Protein interactions for RNA: ENST00000461660.1

ATP13A3-206, Transcript of ATPase 13A3, humanhuman

TSL 1 (best)

Gene ATP13A3, Length 3,517 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A3-206ENST00000461660 TIRAPP58753 221 aa2.89□□□□□ -1.95
ATP13A3-206ENST00000461660 CKS1BP61024 79 aa2.89□□□□□ -1.95
ATP13A3-206ENST00000461660 NTM-AS1Q6ZSK4 140 aa2.89□□□□□ -1.95
ATP13A3-206ENST00000461660 AMELXQ99217 191 aa2.89□□□□□ -1.95
ATP13A3-206ENST00000461660 SNHG12Q9BXW3 62 aa2.89□□□□□ -1.95
ATP13A3-206ENST00000461660 CDC42SE2Q9NRR3 84 aa2.89□□□□□ -1.95
ATP13A3-206ENST00000461660 KLK12Q9UKR0 248 aa2.89□□□□□ -1.95
ATP13A3-206ENST00000461660 IGLV10-54A0A075B6I4 117 aa2.89□□□□□ -1.95
ATP13A3-206ENST00000461660 IGHV1-58A0A0C4DH39 117 aa2.89□□□□□ -1.95
ATP13A3-206ENST00000461660 C15orf53Q8NAA6 179 aa2.89□□□□□ -1.95
ATP13A3-206ENST00000461660 RAB37Q96AX2 223 aa2.89□□□□□ -1.95
ATP13A3-206ENST00000461660 NHP2Q9NX24 153 aaKnown RBP2.89□□□□□ -1.95
ATP13A3-206ENST00000461660 CDKN2A-AS1Q9UH64 79 aa2.89□□□□□ -1.95
ATP13A3-206ENST00000461660 IGLV4-69A0A075B6H9 119 aa2.88□□□□□ -1.95
ATP13A3-206ENST00000461660 TRAV8-3A0A0A6YYJ7 113 aa2.88□□□□□ -1.95
ATP13A3-206ENST00000461660 A0A0U1RRA0 63 aa2.88□□□□□ -1.95
ATP13A3-206ENST00000461660 TMEM223A0PJW6 202 aa2.88□□□□□ -1.95
ATP13A3-206ENST00000461660 CCL25O15444 150 aa2.88□□□□□ -1.95
ATP13A3-206ENST00000461660 SMIM13P0DJ93 91 aa2.88□□□□□ -1.95
ATP13A3-206ENST00000461660 PCP4P48539 62 aa2.88□□□□□ -1.95
ATP13A3-206ENST00000461660 UBE2D1P51668 147 aa2.88□□□□□ -1.95
ATP13A3-206ENST00000461660 LINC00269Q8N2A0 174 aa2.88□□□□□ -1.95
ATP13A3-206ENST00000461660 ZNF625Q96I27 306 aaPredicted RBP2.88□□□□□ -1.95
ATP13A3-206ENST00000461660 TENM1Q9UKZ4 2725 aa2.88□□□□□ -1.95
ATP13A3-206ENST00000461660 NBEAL2Q6ZNJ1 2754 aa2.88□□□□□ -1.95
ATP13A3-206ENST00000461660 SVEP1Q4LDE5 3571 aa2.88□□□□□ -1.95
ATP13A3-206ENST00000461660 COX7A2LO14548 114 aa2.88□□□□□ -1.95
ATP13A3-206ENST00000461660 REG3AQ06141 175 aa2.88□□□□□ -1.95
ATP13A3-206ENST00000461660 TAL2Q16559 108 aa2.88□□□□□ -1.95
ATP13A3-206ENST00000461660 LYRM7Q5U5X0 104 aa2.88□□□□□ -1.95
ATP13A3-206ENST00000461660 HIGD1BQ9P298 99 aa2.88□□□□□ -1.95
ATP13A3-206ENST00000461660 TP73-AS1Q9UF72 201 aa2.88□□□□□ -1.95
ATP13A3-206ENST00000461660 LINC00158P58513 81 aa2.88□□□□□ -1.95
ATP13A3-206ENST00000461660 RPL24P83731 157 aaKnown RBP2.88□□□□□ -1.95
ATP13A3-206ENST00000461660 BVES-AS1Q5T3Y7 98 aa2.88□□□□□ -1.95
ATP13A3-206ENST00000461660 C1orf43Q9BWL3 253 aa2.88□□□□□ -1.95
ATP13A3-206ENST00000461660 Q9H8V8 135 aa2.88□□□□□ -1.95
ATP13A3-206ENST00000461660 IGLV4-60A0A075B6I1 120 aa2.87□□□□□ -1.95
ATP13A3-206ENST00000461660 H3BNG1 76 aa2.87□□□□□ -1.95
ATP13A3-206ENST00000461660 PSMB2P49721 201 aa2.87□□□□□ -1.95
ATP13A3-206ENST00000461660 LINC00242Q5T6M2 205 aa2.87□□□□□ -1.95
ATP13A3-206ENST00000461660 RMI2Q96E14 147 aa2.87□□□□□ -1.95
ATP13A3-206ENST00000461660 KLK5Q9Y337 293 aaPredicted RBP2.87□□□□□ -1.95
ATP13A3-206ENST00000461660 LINC00959A0A1B0GUT2 108 aa2.87□□□□□ -1.95
ATP13A3-206ENST00000461660 H7C2G1 150 aa2.87□□□□□ -1.95
ATP13A3-206ENST00000461660 SCGB1C2P0DMR2 95 aa2.87□□□□□ -1.95
ATP13A3-206ENST00000461660 HERV-K104P63124 156 aa2.87□□□□□ -1.95
ATP13A3-206ENST00000461660 SFTA2Q6UW10 78 aa2.87□□□□□ -1.95
ATP13A3-206ENST00000461660 MAPKAPK5-AS1Q8N8E1 139 aa2.87□□□□□ -1.95
ATP13A3-206ENST00000461660 COX7B2Q8TF08 81 aa2.87□□□□□ -1.95
ATP13A3-206ENST00000461660 Q9HAA7 133 aa2.87□□□□□ -1.95
ATP13A3-206ENST00000461660 IGKV2D-24A0A075B6R9 120 aa2.86□□□□□ -1.95
ATP13A3-206ENST00000461660 A0A1B0GUV1 79 aa2.86□□□□□ -1.95
ATP13A3-206ENST00000461660 A0A1B0GV90 55 aa2.86□□□□□ -1.95
ATP13A3-206ENST00000461660 NHLRC4P0CG21 123 aaPredicted RBP2.86□□□□□ -1.95
ATP13A3-206ENST00000461660 FABP2P12104 132 aa2.86□□□□□ -1.95
ATP13A3-206ENST00000461660 LURAP1LQ8IV03 231 aa2.86□□□□□ -1.95
ATP13A3-206ENST00000461660 CHCHD10Q8WYQ3 142 aaPredicted RBP2.86□□□□□ -1.95
ATP13A3-206ENST00000461660 TM2D3Q9BRN9 247 aa2.86□□□□□ -1.95
ATP13A3-206ENST00000461660 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.86□□□□□ -1.95
ATP13A3-206ENST00000461660 NPC2P61916 151 aa2.86□□□□□ -1.95
ATP13A3-206ENST00000461660 LYPD5Q6UWN5 251 aa2.86□□□□□ -1.95
ATP13A3-206ENST00000461660 GTF2H5Q6ZYL4 71 aa2.86□□□□□ -1.95
ATP13A3-206ENST00000461660 CEND1Q8N111 149 aa2.86□□□□□ -1.95
ATP13A3-206ENST00000461660 B9D2Q9BPU9 175 aa2.86□□□□□ -1.95
ATP13A3-206ENST00000461660 KRTAP4-8A0A0G2JLE6 195 aa2.86□□□□□ -1.95
ATP13A3-206ENST00000461660 LOC107984156A0A0G2JMH3 177 aa2.86□□□□□ -1.95
ATP13A3-206ENST00000461660 GAGE12HA6NDE8 117 aa2.86□□□□□ -1.95
ATP13A3-206ENST00000461660 ZNF561-AS1K7EIQ3 104 aa2.86□□□□□ -1.95
ATP13A3-206ENST00000461660 C2orf91Q6ZV80 131 aa2.86□□□□□ -1.95
ATP13A3-206ENST00000461660 ARL17AQ8IVW1 177 aa2.86□□□□□ -1.95
ATP13A3-206ENST00000461660 TRAV8-4A0A0B4J246 113 aa2.85□□□□□ -1.95
ATP13A3-206ENST00000461660 H3BUT2 72 aa2.85□□□□□ -1.95
ATP13A3-206ENST00000461660 PFN2P35080 140 aa2.85□□□□□ -1.95
ATP13A3-206ENST00000461660 SPAG11BQ08648 103 aa2.85□□□□□ -1.95
ATP13A3-206ENST00000461660 ZFAND6Q6FIF0 208 aa2.85□□□□□ -1.95
ATP13A3-206ENST00000461660 CD164L2Q6UWJ8 174 aa2.85□□□□□ -1.95
ATP13A3-206ENST00000461660 C10orf126Q8N4M7 172 aa2.85□□□□□ -1.95
ATP13A3-206ENST00000461660 A0A0J9YXY3 114 aa2.85□□□□□ -1.95
ATP13A3-206ENST00000461660 SMIM1B2RUZ4 78 aa2.85□□□□□ -1.95
ATP13A3-206ENST00000461660 PSCAO43653 123 aa2.85□□□□□ -1.95
ATP13A3-206ENST00000461660 COX6CP09669 75 aa2.85□□□□□ -1.95
ATP13A3-206ENST00000461660 MIAQ16674 131 aa2.85□□□□□ -1.95
ATP13A3-206ENST00000461660 ANK3Q12955 4377 aaKnown RBP2.85□□□□□ -1.95
ATP13A3-206ENST00000461660 GAGE10A6NGK3 116 aa2.85□□□□□ -1.95
ATP13A3-206ENST00000461660 NDUFA1O15239 70 aa2.85□□□□□ -1.95
ATP13A3-206ENST00000461660 IFITM1P13164 125 aa2.85□□□□□ -1.95
ATP13A3-206ENST00000461660 CXCL5P42830 114 aa2.85□□□□□ -1.95
ATP13A3-206ENST00000461660 FXYD2P54710 66 aa2.85□□□□□ -1.95
ATP13A3-206ENST00000461660 TSPEAR-AS2P59090 65 aa2.85□□□□□ -1.95
ATP13A3-206ENST00000461660 COX6A2Q02221 97 aa2.85□□□□□ -1.95
ATP13A3-206ENST00000461660 Q6ZVH6 145 aa2.85□□□□□ -1.95
ATP13A3-206ENST00000461660 WFDC10BQ8IUB3 73 aa2.85□□□□□ -1.95
ATP13A3-206ENST00000461660 A0A087WZ39 114 aa2.84□□□□□ -1.95
ATP13A3-206ENST00000461660 OR13C6PQ8NH95 151 aa2.84□□□□□ -1.95
ATP13A3-206ENST00000461660 NAA38Q9BRA0 125 aaKnown RBP2.84□□□□□ -1.95
ATP13A3-206ENST00000461660 ERG28Q9UKR5 140 aa2.84□□□□□ -1.95
ATP13A3-206ENST00000461660 VWFP04275 2813 aa2.84□□□□□ -1.95
ATP13A3-206ENST00000461660 IGLV5-45A0A087WSX0 123 aa2.84□□□□□ -1.95
ATP13A3-206ENST00000461660 NUPR2A6NF83 97 aa2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms