RNA–Protein interactions for RNA: ENST00000461214.1

COL5A3-202, Transcript of collagen type V alpha 3 chain, humanhuman

TSL 3

Gene COL5A3, Length 828 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3-202ENST00000461214 FABP4P15090 132 aa9.58□□□□□ -0.88
COL5A3-202ENST00000461214 S100A2P29034 98 aa9.58□□□□□ -0.88
COL5A3-202ENST00000461214 KRTAP26-1Q6PEX3 210 aa9.58□□□□□ -0.88
COL5A3-202ENST00000461214 CD164L2Q6UWJ8 174 aa9.58□□□□□ -0.88
COL5A3-202ENST00000461214 HERC1Q15751 4861 aa9.57□□□□□ -0.88
COL5A3-202ENST00000461214 XCL1P47992 114 aa9.57□□□□□ -0.88
COL5A3-202ENST00000461214 HERVK_113P63121 156 aa9.57□□□□□ -0.88
COL5A3-202ENST00000461214 LINC00242Q5T6M2 205 aa9.57□□□□□ -0.88
COL5A3-202ENST00000461214 MAP1LC3CQ9BXW4 147 aa9.57□□□□□ -0.88
COL5A3-202ENST00000461214 FAT2Q9NYQ8 4349 aa9.57□□□□□ -0.88
COL5A3-202ENST00000461214 TINCRA0A1B0GVN0 87 aa9.56□□□□□ -0.88
COL5A3-202ENST00000461214 RTL8CO15255 209 aa9.56□□□□□ -0.88
COL5A3-202ENST00000461214 SNRPEP62304 92 aaKnown RBP9.56□□□□□ -0.88
COL5A3-202ENST00000461214 FOXI1Q12951 378 aa9.56□□□□□ -0.88
COL5A3-202ENST00000461214 ZC2HC1BQ5TFG8 222 aa9.56□□□□□ -0.88
COL5A3-202ENST00000461214 DNAH2Q9P225 4427 aa9.55□□□□□ -0.88
COL5A3-202ENST00000461214 IGHV3OR16-9A0A0B4J2B5 98 aa9.55□□□□□ -0.88
COL5A3-202ENST00000461214 GAGE12HA6NDE8 117 aa9.55□□□□□ -0.88
COL5A3-202ENST00000461214 F8VRH5 84 aa9.55□□□□□ -0.88
COL5A3-202ENST00000461214 IGLC3P0DOY3 106 aa9.55□□□□□ -0.88
COL5A3-202ENST00000461214 SPATA12Q7Z6I5 190 aa9.55□□□□□ -0.88
COL5A3-202ENST00000461214 HIST1H2BLQ99880 126 aa9.55□□□□□ -0.88
COL5A3-202ENST00000461214 GEMIN7Q9H840 131 aaKnown RBP9.55□□□□□ -0.88
COL5A3-202ENST00000461214 DNAH11Q96DT5 4516 aa9.54□□□□□ -0.88
COL5A3-202ENST00000461214 IGLV5-45A0A087WSX0 123 aa9.54□□□□□ -0.88
COL5A3-202ENST00000461214 ODF1Q14990 250 aa9.54□□□□□ -0.88
COL5A3-202ENST00000461214 CHAC1Q9BUX1 264 aa9.54□□□□□ -0.88
COL5A3-202ENST00000461214 TMA7Q9Y2S6 64 aaKnown RBP9.54□□□□□ -0.88
COL5A3-202ENST00000461214 CHTOPQ9Y3Y2 248 aaKnown RBP9.54□□□□□ -0.88
COL5A3-202ENST00000461214 IGLV4-69A0A075B6H9 119 aa9.53□□□□□ -0.88
COL5A3-202ENST00000461214 A0A0J9YXV3 536 aa9.53□□□□□ -0.88
COL5A3-202ENST00000461214 SYS1-DBNDD2H3BUS1 97 aa9.53□□□□□ -0.88
COL5A3-202ENST00000461214 COX7A2LO14548 114 aa9.53□□□□□ -0.88
COL5A3-202ENST00000461214 LINC01561Q8N1V8 128 aa9.53□□□□□ -0.88
COL5A3-202ENST00000461214 HSPG2P98160 4391 aa9.53□□□□□ -0.88
COL5A3-202ENST00000461214 A0A087WZ39 114 aa9.52□□□□□ -0.89
COL5A3-202ENST00000461214 PLNP26678 52 aa9.52□□□□□ -0.89
COL5A3-202ENST00000461214 C14orf177Q52M58 125 aa9.52□□□□□ -0.89
COL5A3-202ENST00000461214 PET117Q6UWS5 81 aa9.52□□□□□ -0.89
COL5A3-202ENST00000461214 LRCOL1A6NCL2 159 aa9.51□□□□□ -0.89
COL5A3-202ENST00000461214 H0Y8G0 127 aa9.51□□□□□ -0.89
COL5A3-202ENST00000461214 APOMO95445 188 aa9.51□□□□□ -0.89
COL5A3-202ENST00000461214 C3orf79P0CE67 100 aa9.51□□□□□ -0.89
COL5A3-202ENST00000461214 CFAP161Q6P656 301 aa9.51□□□□□ -0.89
COL5A3-202ENST00000461214 MRPL35Q9NZE8 188 aaKnown RBP9.51□□□□□ -0.89
COL5A3-202ENST00000461214 IGHV1-58A0A0C4DH39 117 aa9.5□□□□□ -0.89
COL5A3-202ENST00000461214 USP17L23D6RBM5 183 aa9.5□□□□□ -0.89
COL5A3-202ENST00000461214 H3BRM9 83 aa9.5□□□□□ -0.89
COL5A3-202ENST00000461214 MALP21145 153 aa9.5□□□□□ -0.89
COL5A3-202ENST00000461214 AKR1D1P51857 326 aa9.5□□□□□ -0.89
COL5A3-202ENST00000461214 KRTDAPP60985 99 aa9.5□□□□□ -0.89
COL5A3-202ENST00000461214 COX6A2Q02221 97 aa9.5□□□□□ -0.89
COL5A3-202ENST00000461214 LINC01545Q5VT33 79 aa9.5□□□□□ -0.89
COL5A3-202ENST00000461214 LINC00469Q8N7U9 141 aa9.5□□□□□ -0.89
COL5A3-202ENST00000461214 CDKN2A-AS1Q9UH64 79 aa9.5□□□□□ -0.89
COL5A3-202ENST00000461214 DNAH17Q9UFH2 4485 aa9.49□□□□□ -0.89
COL5A3-202ENST00000461214 A0A087WTM6 91 aa9.49□□□□□ -0.89
COL5A3-202ENST00000461214 C20orf202A1L168 122 aa9.49□□□□□ -0.89
COL5A3-202ENST00000461214 C11orf86A6NJI1 115 aa9.49□□□□□ -0.89
COL5A3-202ENST00000461214 EREGO14944 169 aa9.49□□□□□ -0.89
COL5A3-202ENST00000461214 ZNF22P17026 224 aaPredicted RBP9.49□□□□□ -0.89
COL5A3-202ENST00000461214 C15orf56Q8N910 161 aa9.49□□□□□ -0.89
COL5A3-202ENST00000461214 OR10D4PQ8NGN7 298 aa9.49□□□□□ -0.89
COL5A3-202ENST00000461214 GVQW2A0A096LPI5 108 aaPredicted RBP9.48□□□□□ -0.89
COL5A3-202ENST00000461214 DPM2O94777 84 aa9.48□□□□□ -0.89
COL5A3-202ENST00000461214 TNP2Q05952 138 aa9.48□□□□□ -0.89
COL5A3-202ENST00000461214 C5orf38Q86SI9 138 aa9.48□□□□□ -0.89
COL5A3-202ENST00000461214 C16orf90A8MZG2 172 aa9.47□□□□□ -0.89
COL5A3-202ENST00000461214 Q8N1X5 172 aa9.47□□□□□ -0.89
COL5A3-202ENST00000461214 PKD1P98161 4303 aa9.47□□□□□ -0.89
COL5A3-202ENST00000461214 IGHV3-64A0A075B6Q5 118 aa9.46□□□□□ -0.9
COL5A3-202ENST00000461214 SMIM1B2RUZ4 78 aa9.46□□□□□ -0.9
COL5A3-202ENST00000461214 CDK2AP2O75956 126 aa9.46□□□□□ -0.9
COL5A3-202ENST00000461214 IGKCP01834 107 aa9.46□□□□□ -0.9
COL5A3-202ENST00000461214 WFDC2Q14508 124 aa9.46□□□□□ -0.9
COL5A3-202ENST00000461214 TMEM170BQ5T4T1 132 aa9.46□□□□□ -0.9
COL5A3-202ENST00000461214 Q8N814 137 aa9.46□□□□□ -0.9
COL5A3-202ENST00000461214 LECT2O14960 151 aa9.45□□□□□ -0.9
COL5A3-202ENST00000461214 ORAOV1Q8WV07 137 aa9.45□□□□□ -0.9
COL5A3-202ENST00000461214 SPAG11BQ08648 103 aa9.44□□□□□ -0.9
COL5A3-202ENST00000461214 Q8IZM0 81 aa9.44□□□□□ -0.9
COL5A3-202ENST00000461214 NTN5Q8WTR8 489 aaPredicted RBP9.44□□□□□ -0.9
COL5A3-202ENST00000461214 PMCHL2Q9BQD1 86 aa9.44□□□□□ -0.9
COL5A3-202ENST00000461214 hDV102S1A0JD36 115 aa9.43□□□□□ -0.9
COL5A3-202ENST00000461214 TMEM223A0PJW6 202 aa9.43□□□□□ -0.9
COL5A3-202ENST00000461214 F8WDY8 70 aa9.43□□□□□ -0.9
COL5A3-202ENST00000461214 ZNF561-AS1K7EIQ3 104 aa9.43□□□□□ -0.9
COL5A3-202ENST00000461214 IGLV5-39A0A0G2JS06 123 aa9.42□□□□□ -0.9
COL5A3-202ENST00000461214 SPINK8P0C7L1 97 aa9.42□□□□□ -0.9
COL5A3-202ENST00000461214 HERVK_113P61574 105 aa9.42□□□□□ -0.9
COL5A3-202ENST00000461214 HIGD2BQ4VC39 106 aa9.42□□□□□ -0.9
COL5A3-202ENST00000461214 CDPF1Q6NVV7 123 aa9.42□□□□□ -0.9
COL5A3-202ENST00000461214 C2orf48Q96LS8 159 aa9.42□□□□□ -0.9
COL5A3-202ENST00000461214 PRSS2P07478 247 aa9.41□□□□□ -0.9
COL5A3-202ENST00000461214 CXCL5P42830 114 aa9.41□□□□□ -0.9
COL5A3-202ENST00000461214 CNBPP62633 177 aaKnown RBP9.41□□□□□ -0.9
COL5A3-202ENST00000461214 UBR4Q5T4S7 5183 aa9.4□□□□□ -0.9
COL5A3-202ENST00000461214 SFTA2Q6UW10 78 aa9.4□□□□□ -0.9
COL5A3-202ENST00000461214 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.39□□□□□ -0.91
COL5A3-202ENST00000461214 KIAA0087Q14695 138 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms