RNA–Protein interactions for RNA: ENST00000461099.1

HMG20B-207, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 687 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-207ENST00000461099 RPL39P62891 51 aaKnown RBP13.2□□□□□ -0.3
HMG20B-207ENST00000461099 ALKAL2Q6UX46 152 aa13.2□□□□□ -0.3
HMG20B-207ENST00000461099 UNQ6190/PRO20217Q6UXQ8 127 aa13.2□□□□□ -0.3
HMG20B-207ENST00000461099 FAM19A5Q7Z5A7 132 aaPredicted RBP13.2□□□□□ -0.3
HMG20B-207ENST00000461099 C20orf78Q9BR46 151 aa13.2□□□□□ -0.3
HMG20B-207ENST00000461099 FAM104BQ5XKR9 115 aa13.19□□□□□ -0.3
HMG20B-207ENST00000461099 EIF5A2Q9GZV4 153 aaKnown RBP13.19□□□□□ -0.3
HMG20B-207ENST00000461099 MUC2Q02817 5179 aa13.19□□□□□ -0.3
HMG20B-207ENST00000461099 TCAPO15273 167 aa13.18□□□□□ -0.3
HMG20B-207ENST00000461099 GAGE2EQ4V326 116 aa13.18□□□□□ -0.3
HMG20B-207ENST00000461099 C6orf48Q9UBA6 75 aa13.18□□□□□ -0.3
HMG20B-207ENST00000461099 GAGE2DQ9UEU5 116 aa13.18□□□□□ -0.3
HMG20B-207ENST00000461099 TRBV24-1A0A075B6N3 115 aa13.17□□□□□ -0.3
HMG20B-207ENST00000461099 LINC00862A6NCI5 91 aa13.17□□□□□ -0.3
HMG20B-207ENST00000461099 RPL32P62910 135 aaKnown RBP13.17□□□□□ -0.3
HMG20B-207ENST00000461099 PRR4Q16378 134 aa13.17□□□□□ -0.3
HMG20B-207ENST00000461099 KRTAP7-1Q8IUC3 87 aa13.17□□□□□ -0.3
HMG20B-207ENST00000461099 SMDT1Q9H4I9 107 aa13.17□□□□□ -0.3
HMG20B-207ENST00000461099 SPANXA1Q9NS26 97 aa13.17□□□□□ -0.3
HMG20B-207ENST00000461099 NAT8BQ9UHF3 227 aa13.17□□□□□ -0.3
HMG20B-207ENST00000461099 MRPS36P82909 103 aaKnown RBP13.16□□□□□ -0.3
HMG20B-207ENST00000461099 UBE2D1P51668 147 aa13.15□□□□□ -0.3
HMG20B-207ENST00000461099 IFITM10A6NMD0 228 aa13.14□□□□□ -0.31
HMG20B-207ENST00000461099 M0QXV9 152 aa13.14□□□□□ -0.31
HMG20B-207ENST00000461099 CKS2P33552 79 aa13.14□□□□□ -0.31
HMG20B-207ENST00000461099 RPL13AP40429 203 aaKnown RBP13.14□□□□□ -0.31
HMG20B-207ENST00000461099 UBE2BP63146 152 aa13.14□□□□□ -0.31
HMG20B-207ENST00000461099 HBBP68871 147 aa13.14□□□□□ -0.31
HMG20B-207ENST00000461099 TNFRSF6BO95407 300 aa13.13□□□□□ -0.31
HMG20B-207ENST00000461099 SRP19P09132 144 aaKnown RBP13.13□□□□□ -0.31
HMG20B-207ENST00000461099 KIAA0087Q14695 138 aa13.12□□□□□ -0.31
HMG20B-207ENST00000461099 FAM74A3Q4VXF1 159 aa13.12□□□□□ -0.31
HMG20B-207ENST00000461099 SMIM2Q9BVW6 85 aa13.12□□□□□ -0.31
HMG20B-207ENST00000461099 TGIF2-C20orf24A0A0A6YYL0 155 aa13.1□□□□□ -0.31
HMG20B-207ENST00000461099 TRBV30A0A0K0K1B3 111 aa13.09□□□□□ -0.31
HMG20B-207ENST00000461099 A0A1B0GW15 77 aa13.09□□□□□ -0.31
HMG20B-207ENST00000461099 SMIM27A0A1W2PRY6 76 aa13.09□□□□□ -0.31
HMG20B-207ENST00000461099 CARHSP1Q9Y2V2 147 aaKnown RBP13.09□□□□□ -0.31
HMG20B-207ENST00000461099 NDUFC2-KCTD14E9PQ53 114 aa13.08□□□□□ -0.32
HMG20B-207ENST00000461099 RPL23P62829 140 aaKnown RBP13.08□□□□□ -0.32
HMG20B-207ENST00000461099 D6R8Y8 96 aa13.07□□□□□ -0.32
HMG20B-207ENST00000461099 C9orf129Q5T035 196 aaKnown RBP13.07□□□□□ -0.32
HMG20B-207ENST00000461099 C2orf82Q6UX34 121 aa13.07□□□□□ -0.32
HMG20B-207ENST00000461099 A0A0U1RQV1 116 aa13.06□□□□□ -0.32
HMG20B-207ENST00000461099 LINC00242Q5T6M2 205 aa13.06□□□□□ -0.32
HMG20B-207ENST00000461099 NPYP01303 97 aa13.05□□□□□ -0.32
HMG20B-207ENST00000461099 ADIRFQ15847 76 aa13.05□□□□□ -0.32
HMG20B-207ENST00000461099 PACRGQ96M98 296 aaPredicted RBP13.05□□□□□ -0.32
HMG20B-207ENST00000461099 F8W036 122 aa13.04□□□□□ -0.32
HMG20B-207ENST00000461099 ZNF861PO60384 105 aa13.04□□□□□ -0.32
HMG20B-207ENST00000461099 IFI27P40305 119 aaPredicted RBP13.04□□□□□ -0.32
HMG20B-207ENST00000461099 PYGO1Q9Y3Y4 419 aa13.04□□□□□ -0.32
HMG20B-207ENST00000461099 IGLV4-3A0A075B6K6 122 aa13.02□□□□□ -0.33
HMG20B-207ENST00000461099 PPBPP02775 128 aa13.02□□□□□ -0.33
HMG20B-207ENST00000461099 S100A8P05109 93 aa13.02□□□□□ -0.33
HMG20B-207ENST00000461099 RAB5AP20339 215 aa13.02□□□□□ -0.33
HMG20B-207ENST00000461099 MRPL54Q6P161 138 aaKnown RBP13.01□□□□□ -0.33
HMG20B-207ENST00000461099 AKAP14Q86UN6 197 aa13.01□□□□□ -0.33
HMG20B-207ENST00000461099 NAT8Q9UHE5 227 aa13.01□□□□□ -0.33
HMG20B-207ENST00000461099 TSPAN13O95857 204 aa13□□□□□ -0.33
HMG20B-207ENST00000461099 LINC01561Q8N1V8 128 aa13□□□□□ -0.33
HMG20B-207ENST00000461099 TMEM141Q96I45 108 aa13□□□□□ -0.33
HMG20B-207ENST00000461099 KRTAP9-2Q9BYQ4 174 aa13□□□□□ -0.33
HMG20B-207ENST00000461099 A0A1B0GXF2 115 aa12.99□□□□□ -0.33
HMG20B-207ENST00000461099 NUPR1O60356 82 aa12.98□□□□□ -0.33
HMG20B-207ENST00000461099 C22orf24Q9Y442 160 aa12.98□□□□□ -0.33
HMG20B-207ENST00000461099 C9JQL5 133 aa12.97□□□□□ -0.33
HMG20B-207ENST00000461099 TEX43Q6ZNM6 134 aa12.97□□□□□ -0.33
HMG20B-207ENST00000461099 ORMDL3Q8N138 153 aa12.97□□□□□ -0.33
HMG20B-207ENST00000461099 PRSS2P07478 247 aa12.96□□□□□ -0.33
HMG20B-207ENST00000461099 LBHQ53QV2 105 aaPredicted RBP12.96□□□□□ -0.33
HMG20B-207ENST00000461099 TMEM136Q6ZRR5 245 aa12.96□□□□□ -0.33
HMG20B-207ENST00000461099 LINC00469Q8N7U9 141 aa12.96□□□□□ -0.33
HMG20B-207ENST00000461099 CKS1BP61024 79 aa12.95□□□□□ -0.34
HMG20B-207ENST00000461099 PRELID3AQ96N28 172 aa12.95□□□□□ -0.34
HMG20B-207ENST00000461099 C2orf88Q9BSF0 95 aa12.95□□□□□ -0.34
HMG20B-207ENST00000461099 CTDSP1Q9GZU7 261 aa12.95□□□□□ -0.34
HMG20B-207ENST00000461099 Q6ZN92 141 aa12.94□□□□□ -0.34
HMG20B-207ENST00000461099 C6orf226Q5I0X4 101 aa12.93□□□□□ -0.34
HMG20B-207ENST00000461099 XAGE1AQ9HD64 81 aa12.93□□□□□ -0.34
HMG20B-207ENST00000461099 TOMM7Q9P0U1 55 aa12.93□□□□□ -0.34
HMG20B-207ENST00000461099 A0A087X002 238 aa12.92□□□□□ -0.34
HMG20B-207ENST00000461099 ZC2HC1BQ5TFG8 222 aa12.92□□□□□ -0.34
HMG20B-207ENST00000461099 PRSS47A8MTI9 375 aa12.91□□□□□ -0.34
HMG20B-207ENST00000461099 RPL28P46779 137 aaKnown RBP12.91□□□□□ -0.34
HMG20B-207ENST00000461099 LINC00173Q6ZV60 143 aa12.91□□□□□ -0.34
HMG20B-207ENST00000461099 Q8IZM0 81 aa12.91□□□□□ -0.34
HMG20B-207ENST00000461099 AMELXQ99217 191 aa12.91□□□□□ -0.34
HMG20B-207ENST00000461099 VCX2Q9H322 139 aa12.91□□□□□ -0.34
HMG20B-207ENST00000461099 LOC389332A0A1B0GUA5 103 aa12.9□□□□□ -0.34
HMG20B-207ENST00000461099 CRYGAP11844 174 aa12.9□□□□□ -0.34
HMG20B-207ENST00000461099 SRSF3P84103 164 aaKnown RBP12.9□□□□□ -0.34
HMG20B-207ENST00000461099 TYMSOSQ8TAI1 123 aa12.9□□□□□ -0.34
HMG20B-207ENST00000461099 ALKBH7Q9BT30 221 aaPredicted RBP12.9□□□□□ -0.34
HMG20B-207ENST00000461099 TP73-AS1Q9UF72 201 aa12.9□□□□□ -0.34
HMG20B-207ENST00000461099 BCE1O60756 84 aa12.89□□□□□ -0.35
HMG20B-207ENST00000461099 PEA15Q15121 130 aa12.89□□□□□ -0.35
HMG20B-207ENST00000461099 LCE2AQ5TA79 106 aaPredicted RBP12.89□□□□□ -0.35
HMG20B-207ENST00000461099 ATP5L2Q7Z4Y8 100 aa12.89□□□□□ -0.35
HMG20B-207ENST00000461099 MRPL55Q7Z7F7 128 aaKnown RBP12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms