RNA–Protein interactions for RNA: ENST00000461004.1

RTN4-212, Transcript of reticulon 4, humanhuman

TSL 3

Gene RTN4, Length 422 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-212ENST00000461004 LINC00959A0A1B0GUT2 108 aa4.77□□□□□ -1.65
RTN4-212ENST00000461004 USP17L23D6RBM5 183 aa4.77□□□□□ -1.65
RTN4-212ENST00000461004 ZNF25P17030 456 aaPredicted RBP4.77□□□□□ -1.65
RTN4-212ENST00000461004 RAB5AP20339 215 aa4.77□□□□□ -1.65
RTN4-212ENST00000461004 KRTAP10-1P60331 282 aa4.77□□□□□ -1.65
RTN4-212ENST00000461004 ZC2HC1BQ5TFG8 222 aa4.77□□□□□ -1.65
RTN4-212ENST00000461004 CHCHD10Q8WYQ3 142 aaPredicted RBP4.77□□□□□ -1.65
RTN4-212ENST00000461004 URB1-AS1Q96HZ7 61 aa4.77□□□□□ -1.65
RTN4-212ENST00000461004 TMEM101Q96IK0 257 aa4.77□□□□□ -1.65
RTN4-212ENST00000461004 KRTAP17-1Q9BYP8 105 aa4.77□□□□□ -1.65
RTN4-212ENST00000461004 SMCO4Q9NRQ5 59 aa4.77□□□□□ -1.65
RTN4-212ENST00000461004 CCL25O15444 150 aa4.76□□□□□ -1.65
RTN4-212ENST00000461004 MT-ND6P03923 174 aa4.76□□□□□ -1.65
RTN4-212ENST00000461004 PRSS1P07477 247 aa4.76□□□□□ -1.65
RTN4-212ENST00000461004 XCL1P47992 114 aa4.76□□□□□ -1.65
RTN4-212ENST00000461004 COX19Q49B96 90 aa4.76□□□□□ -1.65
RTN4-212ENST00000461004 TIMM21Q9BVV7 248 aa4.76□□□□□ -1.65
RTN4-212ENST00000461004 CSDC2Q9Y534 153 aaKnown RBP4.76□□□□□ -1.65
RTN4-212ENST00000461004 IGLV4-3A0A075B6K6 122 aa4.75□□□□□ -1.65
RTN4-212ENST00000461004 IGLV5-52A0A0A0MRZ9 124 aa4.75□□□□□ -1.65
RTN4-212ENST00000461004 TRAV13-1A0A0B4J241 112 aa4.75□□□□□ -1.65
RTN4-212ENST00000461004 TRAV8-4A0A0B4J246 113 aa4.75□□□□□ -1.65
RTN4-212ENST00000461004 COLCA2A8K830 154 aa4.75□□□□□ -1.65
RTN4-212ENST00000461004 HAMPP81172 84 aa4.75□□□□□ -1.65
RTN4-212ENST00000461004 C2orf66Q6UXQ4 117 aa4.75□□□□□ -1.65
RTN4-212ENST00000461004 PRSS3P2Q8NHM4 247 aa4.75□□□□□ -1.65
RTN4-212ENST00000461004 NXT2Q9NPJ8 142 aaKnown RBP4.75□□□□□ -1.65
RTN4-212ENST00000461004 LINC01546A6NGU7 62 aa4.74□□□□□ -1.65
RTN4-212ENST00000461004 IGIPA6NJ69 53 aa4.74□□□□□ -1.65
RTN4-212ENST00000461004 C15orf56Q8N910 161 aa4.74□□□□□ -1.65
RTN4-212ENST00000461004 C18orf32Q8TCD1 76 aa4.74□□□□□ -1.65
RTN4-212ENST00000461004 TMEM18Q96B42 140 aa4.74□□□□□ -1.65
RTN4-212ENST00000461004 SPANXA1Q9NS26 97 aa4.74□□□□□ -1.65
RTN4-212ENST00000461004 CYSLTR1Q9Y271 337 aa4.74□□□□□ -1.65
RTN4-212ENST00000461004 A0A096LNJ9 63 aa4.73□□□□□ -1.65
RTN4-212ENST00000461004 A0A0A0MQY5 61 aa4.73□□□□□ -1.65
RTN4-212ENST00000461004 TRGC2P03986 189 aa4.73□□□□□ -1.65
RTN4-212ENST00000461004 MRPS36P82909 103 aaKnown RBP4.73□□□□□ -1.65
RTN4-212ENST00000461004 COX6A2Q02221 97 aa4.73□□□□□ -1.65
RTN4-212ENST00000461004 SS18Q15532 418 aa4.73□□□□□ -1.65
RTN4-212ENST00000461004 PMCHL1Q16048 86 aa4.73□□□□□ -1.65
RTN4-212ENST00000461004 HIGD2BQ4VC39 106 aa4.73□□□□□ -1.65
RTN4-212ENST00000461004 ORMDL2Q53FV1 153 aa4.73□□□□□ -1.65
RTN4-212ENST00000461004 C10orf25Q5T742 122 aa4.73□□□□□ -1.65
RTN4-212ENST00000461004 LINC00173Q6ZV60 143 aa4.73□□□□□ -1.65
RTN4-212ENST00000461004 C5orf38Q86SI9 138 aa4.73□□□□□ -1.65
RTN4-212ENST00000461004 TOMM6Q96B49 74 aa4.73□□□□□ -1.65
RTN4-212ENST00000461004 LINC00526Q96FQ7 95 aa4.73□□□□□ -1.65
RTN4-212ENST00000461004 PYGO1Q9Y3Y4 419 aa4.73□□□□□ -1.65
RTN4-212ENST00000461004 FAT1Q14517 4588 aa4.73□□□□□ -1.65
RTN4-212ENST00000461004 hDV102S1A0JD36 115 aa4.72□□□□□ -1.65
RTN4-212ENST00000461004 IFITM10A6NMD0 228 aa4.72□□□□□ -1.65
RTN4-212ENST00000461004 XGP55808 180 aa4.72□□□□□ -1.65
RTN4-212ENST00000461004 CD164L2Q6UWJ8 174 aa4.72□□□□□ -1.65
RTN4-212ENST00000461004 FA2HQ7L5A8 372 aa4.72□□□□□ -1.65
RTN4-212ENST00000461004 TMEM141Q96I45 108 aa4.72□□□□□ -1.65
RTN4-212ENST00000461004 C1orf196B1AJZ1 125 aa4.71□□□□□ -1.66
RTN4-212ENST00000461004 K7EMI3 77 aa4.71□□□□□ -1.66
RTN4-212ENST00000461004 LINC00614P0C842 121 aa4.71□□□□□ -1.66
RTN4-212ENST00000461004 SMAGPQ0VAQ4 97 aa4.71□□□□□ -1.66
RTN4-212ENST00000461004 LINC00242Q5T6M2 205 aa4.71□□□□□ -1.66
RTN4-212ENST00000461004 SCGB3A1Q96QR1 104 aa4.71□□□□□ -1.66
RTN4-212ENST00000461004 AMELXQ99217 191 aa4.71□□□□□ -1.66
RTN4-212ENST00000461004 NUPR1O60356 82 aa4.7□□□□□ -1.66
RTN4-212ENST00000461004 UBE2D1P51668 147 aa4.7□□□□□ -1.66
RTN4-212ENST00000461004 C14orf177Q52M58 125 aa4.7□□□□□ -1.66
RTN4-212ENST00000461004 ERASQ7Z444 233 aa4.7□□□□□ -1.66
RTN4-212ENST00000461004 VCX2Q9H322 139 aa4.7□□□□□ -1.66
RTN4-212ENST00000461004 GVQW2A0A096LPI5 108 aaPredicted RBP4.69□□□□□ -1.66
RTN4-212ENST00000461004 IGHV3OR16-9A0A0B4J2B5 98 aa4.69□□□□□ -1.66
RTN4-212ENST00000461004 IGHV1-58A0A0C4DH39 117 aa4.69□□□□□ -1.66
RTN4-212ENST00000461004 A0A0J9YXV3 536 aa4.69□□□□□ -1.66
RTN4-212ENST00000461004 PANO1I0J062 215 aa4.69□□□□□ -1.66
RTN4-212ENST00000461004 COX7A2LO14548 114 aa4.69□□□□□ -1.66
RTN4-212ENST00000461004 ATP6V1G1O75348 118 aa4.69□□□□□ -1.66
RTN4-212ENST00000461004 PDZD11Q5EBL8 140 aa4.69□□□□□ -1.66
RTN4-212ENST00000461004 TEX43Q6ZNM6 134 aa4.69□□□□□ -1.66
RTN4-212ENST00000461004 TIMM17AQ99595 171 aa4.69□□□□□ -1.66
RTN4-212ENST00000461004 ABCA13Q86UQ4 5058 aa4.69□□□□□ -1.66
RTN4-212ENST00000461004 IGLV4-69A0A075B6H9 119 aa4.68□□□□□ -1.66
RTN4-212ENST00000461004 CDK2AP2O75956 126 aa4.68□□□□□ -1.66
RTN4-212ENST00000461004 CNBPP62633 177 aaKnown RBP4.68□□□□□ -1.66
RTN4-212ENST00000461004 CFAP161Q6P656 301 aa4.68□□□□□ -1.66
RTN4-212ENST00000461004 Q6ZN92 141 aa4.68□□□□□ -1.66
RTN4-212ENST00000461004 SDIM1Q6ZPB5 146 aa4.68□□□□□ -1.66
RTN4-212ENST00000461004 FAM19A2Q8N3H0 131 aa4.68□□□□□ -1.66
RTN4-212ENST00000461004 C9orf163Q8N9P6 203 aa4.68□□□□□ -1.66
RTN4-212ENST00000461004 IGHV3-64A0A075B6Q5 118 aa4.67□□□□□ -1.66
RTN4-212ENST00000461004 SERF1AO75920 110 aa4.67□□□□□ -1.66
RTN4-212ENST00000461004 HBDP02042 147 aa4.67□□□□□ -1.66
RTN4-212ENST00000461004 SMR3BP02814 79 aaPredicted RBP4.67□□□□□ -1.66
RTN4-212ENST00000461004 CHTF8P0CG12 524 aa4.67□□□□□ -1.66
RTN4-212ENST00000461004 G0S2P27469 103 aa4.67□□□□□ -1.66
RTN4-212ENST00000461004 RAB5BP61020 215 aa4.67□□□□□ -1.66
RTN4-212ENST00000461004 Q6ZSA8 131 aa4.67□□□□□ -1.66
RTN4-212ENST00000461004 FAM19A3Q7Z5A8 133 aa4.67□□□□□ -1.66
RTN4-212ENST00000461004 BAGE3Q86Y29 109 aa4.67□□□□□ -1.66
RTN4-212ENST00000461004 C2orf88Q9BSF0 95 aa4.67□□□□□ -1.66
RTN4-212ENST00000461004 CST9LQ9H4G1 147 aa4.67□□□□□ -1.66
RTN4-212ENST00000461004 A0A087WZ39 114 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms