RNA–Protein interactions for RNA: ENST00000460378.1

EPB41-208, Transcript of erythrocyte membrane protein band 4.1, humanhuman

TSL 1 (best)

Gene EPB41, Length 5,212 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41-208ENST00000460378 CHCHD10Q8WYQ3 142 aaPredicted RBP7.01□□□□□ -1.29
EPB41-208ENST00000460378 LINC00588Q9Y4M8 146 aa7.01□□□□□ -1.29
EPB41-208ENST00000460378 LINC00173Q6ZV60 143 aa7.01□□□□□ -1.29
EPB41-208ENST00000460378 VCANP13611 3396 aa7.01□□□□□ -1.29
EPB41-208ENST00000460378 LOC107984640A0A0U1RRK4 108 aa7□□□□□ -1.29
EPB41-208ENST00000460378 WFDC10BQ8IUB3 73 aa7□□□□□ -1.29
EPB41-208ENST00000460378 EYSQ5T1H1 3165 aa7□□□□□ -1.29
EPB41-208ENST00000460378 XIRP2A4UGR9 3374 aa7□□□□□ -1.29
EPB41-208ENST00000460378 PMVKQ15126 192 aa7□□□□□ -1.29
EPB41-208ENST00000460378 LOC100131303A0A0U1RQF7 123 aa7□□□□□ -1.29
EPB41-208ENST00000460378 F8VRH5 84 aa7□□□□□ -1.29
EPB41-208ENST00000460378 LEPROTO15243 131 aa7□□□□□ -1.29
EPB41-208ENST00000460378 C20orf78Q9BR46 151 aa7□□□□□ -1.29
EPB41-208ENST00000460378 DMXL1Q9Y485 3027 aa7□□□□□ -1.29
EPB41-208ENST00000460378 SCRT2Q9NQ03 307 aa7□□□□□ -1.29
EPB41-208ENST00000460378 RTL8CO15255 209 aa6.99□□□□□ -1.29
EPB41-208ENST00000460378 CDK2AP2O75956 126 aa6.99□□□□□ -1.29
EPB41-208ENST00000460378 PRO1854Q9UHT4 67 aa6.99□□□□□ -1.29
EPB41-208ENST00000460378 RBX1P62877 108 aa6.99□□□□□ -1.29
EPB41-208ENST00000460378 LINC01556Q5JQF7 62 aa6.99□□□□□ -1.29
EPB41-208ENST00000460378 MAPKAPK5-AS1Q8N8E1 139 aa6.98□□□□□ -1.29
EPB41-208ENST00000460378 TMEM141Q96I45 108 aa6.98□□□□□ -1.29
EPB41-208ENST00000460378 SMIM2Q9BVW6 85 aa6.98□□□□□ -1.29
EPB41-208ENST00000460378 SOCS3O14543 225 aa6.98□□□□□ -1.29
EPB41-208ENST00000460378 ETDCA0A1B0GVM5 59 aa6.98□□□□□ -1.29
EPB41-208ENST00000460378 USP17L23D6RBM5 183 aa6.98□□□□□ -1.29
EPB41-208ENST00000460378 CXCL5P42830 114 aa6.98□□□□□ -1.29
EPB41-208ENST00000460378 IFITM1P13164 125 aa6.97□□□□□ -1.29
EPB41-208ENST00000460378 PFN2P35080 140 aa6.97□□□□□ -1.29
EPB41-208ENST00000460378 ANKRD39Q53RE8 183 aa6.97□□□□□ -1.29
EPB41-208ENST00000460378 APCP25054 2843 aa6.97□□□□□ -1.29
EPB41-208ENST00000460378 NSD1Q96L73 2696 aaPredicted RBP6.97□□□□□ -1.29
EPB41-208ENST00000460378 REV3LO60673 3130 aa6.97□□□□□ -1.29
EPB41-208ENST00000460378 B5MCH6 92 aa6.96□□□□□ -1.29
EPB41-208ENST00000460378 K7EMI3 77 aa6.96□□□□□ -1.29
EPB41-208ENST00000460378 TAL2Q16559 108 aa6.96□□□□□ -1.29
EPB41-208ENST00000460378 J3QQQ9 107 aa6.96□□□□□ -1.3
EPB41-208ENST00000460378 TMEM126AQ9H061 195 aa6.96□□□□□ -1.3
EPB41-208ENST00000460378 IGLV4-69A0A075B6H9 119 aa6.95□□□□□ -1.3
EPB41-208ENST00000460378 NEXN-AS1Q8NBZ9 246 aa6.95□□□□□ -1.3
EPB41-208ENST00000460378 TTTY13Q9BZ97 58 aa6.95□□□□□ -1.3
EPB41-208ENST00000460378 INAFM2P0DMQ5 153 aa6.95□□□□□ -1.3
EPB41-208ENST00000460378 KLK9Q2XQG4 91 aa6.95□□□□□ -1.3
EPB41-208ENST00000460378 RPL37AP61513 92 aaKnown RBP6.94□□□□□ -1.3
EPB41-208ENST00000460378 RNASE13Q5GAN3 156 aaKnown RBP6.94□□□□□ -1.3
EPB41-208ENST00000460378 SS18L2Q9UHA2 77 aa6.94□□□□□ -1.3
EPB41-208ENST00000460378 UBE2D4Q9Y2X8 147 aa6.94□□□□□ -1.3
EPB41-208ENST00000460378 TAX1BP3O14907 124 aa6.94□□□□□ -1.3
EPB41-208ENST00000460378 WFDC2Q14508 124 aa6.93□□□□□ -1.3
EPB41-208ENST00000460378 LINC01545Q5VT33 79 aa6.93□□□□□ -1.3
EPB41-208ENST00000460378 IGKV2D-26A0A0A0MRZ7 120 aa6.93□□□□□ -1.3
EPB41-208ENST00000460378 IBA57-AS1B1ANH7 110 aa6.93□□□□□ -1.3
EPB41-208ENST00000460378 KALRNO60229 2985 aa6.93□□□□□ -1.3
EPB41-208ENST00000460378 FXYD2P54710 66 aa6.93□□□□□ -1.3
EPB41-208ENST00000460378 TIMM17AQ99595 171 aa6.92□□□□□ -1.3
EPB41-208ENST00000460378 CFC1BP0CG36 223 aa6.92□□□□□ -1.3
EPB41-208ENST00000460378 CFC1P0CG37 223 aa6.92□□□□□ -1.3
EPB41-208ENST00000460378 FAM19A5Q7Z5A7 132 aaPredicted RBP6.91□□□□□ -1.3
EPB41-208ENST00000460378 MLST8Q9BVC4 326 aa6.91□□□□□ -1.3
EPB41-208ENST00000460378 UBE2D3P61077 147 aa6.91□□□□□ -1.3
EPB41-208ENST00000460378 UBE2D2P62837 147 aa6.91□□□□□ -1.3
EPB41-208ENST00000460378 HAMPP81172 84 aa6.91□□□□□ -1.3
EPB41-208ENST00000460378 C19orf71A6NCJ1 209 aa6.91□□□□□ -1.3
EPB41-208ENST00000460378 ZNF80P51504 273 aaPredicted RBP6.91□□□□□ -1.3
EPB41-208ENST00000460378 RPL39LQ96EH5 51 aaKnown RBP6.9□□□□□ -1.3
EPB41-208ENST00000460378 AGRNO00468 2067 aa6.9□□□□□ -1.3
EPB41-208ENST00000460378 ANKRD29Q8N6D5 301 aa6.9□□□□□ -1.3
EPB41-208ENST00000460378 NBEAQ8NFP9 2946 aa6.9□□□□□ -1.3
EPB41-208ENST00000460378 SMR3BP02814 79 aaPredicted RBP6.9□□□□□ -1.31
EPB41-208ENST00000460378 COL12A1Q99715 3063 aa6.9□□□□□ -1.31
EPB41-208ENST00000460378 TRAV12-1A0A0B4J245 112 aa6.9□□□□□ -1.31
EPB41-208ENST00000460378 TINCRA0A1B0GVN0 87 aa6.9□□□□□ -1.31
EPB41-208ENST00000460378 ZNF706Q9Y5V0 76 aaPredicted RBP6.9□□□□□ -1.31
EPB41-208ENST00000460378 CD164L2Q6UWJ8 174 aa6.89□□□□□ -1.31
EPB41-208ENST00000460378 SMIM20Q8N5G0 67 aa6.89□□□□□ -1.31
EPB41-208ENST00000460378 RPL28P46779 137 aaKnown RBP6.89□□□□□ -1.31
EPB41-208ENST00000460378 PRR9Q5T870 116 aa6.89□□□□□ -1.31
EPB41-208ENST00000460378 UBL5Q9BZL1 73 aa6.89□□□□□ -1.31
EPB41-208ENST00000460378 UFSP1Q6NVU6 142 aa6.88□□□□□ -1.31
EPB41-208ENST00000460378 TRACP01848 142 aa6.88□□□□□ -1.31
EPB41-208ENST00000460378 A0A087WTM6 91 aa6.88□□□□□ -1.31
EPB41-208ENST00000460378 C11orf1Q9H5F2 150 aa6.88□□□□□ -1.31
EPB41-208ENST00000460378 PTH2Q96A98 100 aa6.87□□□□□ -1.31
EPB41-208ENST00000460378 C1orf137Q5JT78 98 aa6.87□□□□□ -1.31
EPB41-208ENST00000460378 UTP20O75691 2785 aaKnown RBP6.87□□□□□ -1.31
EPB41-208ENST00000460378 A4D1N5 150 aa6.87□□□□□ -1.31
EPB41-208ENST00000460378 BOD1L2Q8IYS8 172 aa6.87□□□□□ -1.31
EPB41-208ENST00000460378 CSNK1G2-AS1Q8NCQ2 148 aa6.87□□□□□ -1.31
EPB41-208ENST00000460378 DNAH10OSP0CZ25 163 aa6.86□□□□□ -1.31
EPB41-208ENST00000460378 RNASE3P12724 160 aaKnown RBP6.86□□□□□ -1.31
EPB41-208ENST00000460378 TEN1Q86WV5 123 aa6.86□□□□□ -1.31
EPB41-208ENST00000460378 COX7B2Q8TF08 81 aa6.86□□□□□ -1.31
EPB41-208ENST00000460378 TP73-AS1Q9UF72 201 aa6.86□□□□□ -1.31
EPB41-208ENST00000460378 TNP2Q05952 138 aa6.86□□□□□ -1.31
EPB41-208ENST00000460378 FAM19A1Q7Z5A9 133 aa6.86□□□□□ -1.31
EPB41-208ENST00000460378 MRPS12O15235 138 aaKnown RBP6.85□□□□□ -1.31
EPB41-208ENST00000460378 BAALC-AS2P0C853 105 aa6.85□□□□□ -1.31
EPB41-208ENST00000460378 COX6A2Q02221 97 aa6.85□□□□□ -1.31
EPB41-208ENST00000460378 UPK3BQ9BT76 320 aa6.85□□□□□ -1.31
EPB41-208ENST00000460378 A0A0J9YXV3 536 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms