RNA–Protein interactions for RNA: ENST00000459775.5

USP39-210, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 2,148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-210ENST00000459775 DKK2Q9UBU2 259 aa7.3□□□□□ -1.24
USP39-210ENST00000459775 TRGV2A0A075B6R0 118 aa7.3□□□□□ -1.24
USP39-210ENST00000459775 C8orf87E5RJ46 101 aa7.3□□□□□ -1.24
USP39-210ENST00000459775 F5H697 171 aa7.3□□□□□ -1.24
USP39-210ENST00000459775 FAM104BQ5XKR9 115 aa7.3□□□□□ -1.24
USP39-210ENST00000459775 C18orf15Q96N68 181 aa7.3□□□□□ -1.24
USP39-210ENST00000459775 U3KQK5 164 aa7.29□□□□□ -1.24
USP39-210ENST00000459775 D6R8Y8 96 aa7.28□□□□□ -1.24
USP39-210ENST00000459775 PAX4O43316 350 aa7.28□□□□□ -1.24
USP39-210ENST00000459775 BRK1Q8WUW1 75 aa7.28□□□□□ -1.24
USP39-210ENST00000459775 IMUPQ9GZP8 106 aa7.28□□□□□ -1.24
USP39-210ENST00000459775 NDUFC2-KCTD14E9PQ53 114 aa7.28□□□□□ -1.24
USP39-210ENST00000459775 HLA-DQA1P01909 254 aa7.28□□□□□ -1.24
USP39-210ENST00000459775 ZNF56Q15929 161 aa7.28□□□□□ -1.24
USP39-210ENST00000459775 RPL39LQ96EH5 51 aaKnown RBP7.28□□□□□ -1.24
USP39-210ENST00000459775 DPH3P1Q9H4G8 78 aa7.28□□□□□ -1.24
USP39-210ENST00000459775 STAB2Q8WWQ8 2551 aa7.28□□□□□ -1.24
USP39-210ENST00000459775 HTN3P15516 51 aa7.27□□□□□ -1.25
USP39-210ENST00000459775 COX7CP15954 63 aa7.27□□□□□ -1.25
USP39-210ENST00000459775 LGALS9BQ3B8N2 356 aa7.27□□□□□ -1.25
USP39-210ENST00000459775 SUMO4Q6EEV6 95 aa7.27□□□□□ -1.25
USP39-210ENST00000459775 A8MWV9 139 aa7.27□□□□□ -1.25
USP39-210ENST00000459775 NANOS2P60321 138 aaKnown RBP7.27□□□□□ -1.25
USP39-210ENST00000459775 KLK5Q9Y337 293 aaPredicted RBP7.27□□□□□ -1.25
USP39-210ENST00000459775 SMIM26A0A096LP01 95 aa7.26□□□□□ -1.25
USP39-210ENST00000459775 PRYO14603 147 aa7.26□□□□□ -1.25
USP39-210ENST00000459775 NPYP01303 97 aa7.26□□□□□ -1.25
USP39-210ENST00000459775 C3orf79P0CE67 100 aa7.26□□□□□ -1.25
USP39-210ENST00000459775 CKS2P33552 79 aa7.26□□□□□ -1.25
USP39-210ENST00000459775 LINC00310P59036 64 aa7.26□□□□□ -1.25
USP39-210ENST00000459775 LINC00612Q8N6U2 182 aa7.26□□□□□ -1.25
USP39-210ENST00000459775 NACAE9PAV3 2078 aa7.26□□□□□ -1.25
USP39-210ENST00000459775 TRBV7-6A0A0J9YX20 115 aa7.25□□□□□ -1.25
USP39-210ENST00000459775 LOC100131303A0A0U1RQF7 123 aa7.25□□□□□ -1.25
USP39-210ENST00000459775 LOC389332A0A1B0GUA5 103 aa7.25□□□□□ -1.25
USP39-210ENST00000459775 SPART-AS1P0CW21 52 aa7.25□□□□□ -1.25
USP39-210ENST00000459775 DAD1P61803 113 aa7.25□□□□□ -1.25
USP39-210ENST00000459775 ZC2HC1BQ5TFG8 222 aa7.25□□□□□ -1.25
USP39-210ENST00000459775 PCP2Q8IVA1 136 aa7.25□□□□□ -1.25
USP39-210ENST00000459775 TRAV8-4A0A0B4J246 113 aa7.25□□□□□ -1.25
USP39-210ENST00000459775 TRBV7-7A0A0K0K1E9 115 aa7.25□□□□□ -1.25
USP39-210ENST00000459775 FHL2Q14192 279 aa7.25□□□□□ -1.25
USP39-210ENST00000459775 E9PLD3 99 aa7.24□□□□□ -1.25
USP39-210ENST00000459775 M0QY20 66 aa7.24□□□□□ -1.25
USP39-210ENST00000459775 SERF1AO75920 110 aa7.24□□□□□ -1.25
USP39-210ENST00000459775 SMIM13P0DJ93 91 aa7.24□□□□□ -1.25
USP39-210ENST00000459775 Q6ZTC4 211 aa7.24□□□□□ -1.25
USP39-210ENST00000459775 SLC25A29Q8N8R3 303 aa7.24□□□□□ -1.25
USP39-210ENST00000459775 NRACQ8N912 160 aa7.24□□□□□ -1.25
USP39-210ENST00000459775 FAM30AQ9NZY2 134 aa7.24□□□□□ -1.25
USP39-210ENST00000459775 TRGV4A0A0C4DH28 118 aa7.24□□□□□ -1.25
USP39-210ENST00000459775 A0A0J9YY99 117 aa7.24□□□□□ -1.25
USP39-210ENST00000459775 ORMDL3Q8N138 153 aa7.24□□□□□ -1.25
USP39-210ENST00000459775 CHCHD5Q9BSY4 110 aa7.24□□□□□ -1.25
USP39-210ENST00000459775 MUC7Q8TAX7 377 aa7.23□□□□□ -1.25
USP39-210ENST00000459775 SERP1Q9Y6X1 66 aa7.23□□□□□ -1.25
USP39-210ENST00000459775 LCE6AA0A183 80 aa7.22□□□□□ -1.25
USP39-210ENST00000459775 PIK3CD-AS1Q5SR53 167 aa7.22□□□□□ -1.25
USP39-210ENST00000459775 C11orf68Q9H3H3 251 aaKnown RBP7.22□□□□□ -1.25
USP39-210ENST00000459775 IGHV3-38A0A0C4DH36 116 aa7.22□□□□□ -1.25
USP39-210ENST00000459775 IFI27P40305 119 aaPredicted RBP7.22□□□□□ -1.25
USP39-210ENST00000459775 CASC10Q5T4H9 136 aa7.22□□□□□ -1.25
USP39-210ENST00000459775 SCGB1D4Q6XE38 83 aa7.22□□□□□ -1.25
USP39-210ENST00000459775 TEN1Q86WV5 123 aa7.22□□□□□ -1.25
USP39-210ENST00000459775 URB1-AS1Q96HZ7 61 aa7.22□□□□□ -1.25
USP39-210ENST00000459775 BIRC6Q9NR09 4857 aa7.22□□□□□ -1.25
USP39-210ENST00000459775 A0A096LPF7 62 aa7.21□□□□□ -1.25
USP39-210ENST00000459775 ZFP2Q6ZN57 461 aa7.21□□□□□ -1.25
USP39-210ENST00000459775 NFE4Q86UQ8 179 aa7.21□□□□□ -1.25
USP39-210ENST00000459775 HHLA3Q9XRX5 114 aa7.21□□□□□ -1.25
USP39-210ENST00000459775 H3BT86 120 aa7.21□□□□□ -1.26
USP39-210ENST00000459775 C2orf91Q6ZV80 131 aa7.21□□□□□ -1.26
USP39-210ENST00000459775 NEXN-AS1Q8NBZ9 246 aa7.21□□□□□ -1.26
USP39-210ENST00000459775 PHLDA1Q8WV24 401 aaPredicted RBP7.21□□□□□ -1.26
USP39-210ENST00000459775 COPS9Q8WXC6 57 aa7.2□□□□□ -1.26
USP39-210ENST00000459775 VSIG2Q96IQ7 327 aa7.2□□□□□ -1.26
USP39-210ENST00000459775 COX8AP10176 69 aa7.19□□□□□ -1.26
USP39-210ENST00000459775 BAGE3Q86Y29 109 aa7.19□□□□□ -1.26
USP39-210ENST00000459775 DYNC2H1Q8NCM8 4307 aaKnown RBP7.19□□□□□ -1.26
USP39-210ENST00000459775 K7EQD1 137 aa7.19□□□□□ -1.26
USP39-210ENST00000459775 TNP2Q05952 138 aa7.19□□□□□ -1.26
USP39-210ENST00000459775 DSCR8Q96T75 97 aa7.19□□□□□ -1.26
USP39-210ENST00000459775 SDHAF1A6NFY7 115 aa7.18□□□□□ -1.26
USP39-210ENST00000459775 SUMO2P61956 95 aaKnown RBP7.18□□□□□ -1.26
USP39-210ENST00000459775 PAPPA-AS1Q5QFB9 102 aa7.18□□□□□ -1.26
USP39-210ENST00000459775 TCL1BO95988 128 aa7.18□□□□□ -1.26
USP39-210ENST00000459775 CEND1Q8N111 149 aa7.18□□□□□ -1.26
USP39-210ENST00000459775 FAM19A2Q8N3H0 131 aa7.18□□□□□ -1.26
USP39-210ENST00000459775 PRSS3P2Q8NHM4 247 aa7.18□□□□□ -1.26
USP39-210ENST00000459775 IGLV2-18A0A075B6J9 118 aa7.17□□□□□ -1.26
USP39-210ENST00000459775 DEFB131BA0A096LNP1 70 aa7.17□□□□□ -1.26
USP39-210ENST00000459775 IGHV1-58A0A0C4DH39 117 aa7.17□□□□□ -1.26
USP39-210ENST00000459775 LINC01545Q5VT33 79 aa7.17□□□□□ -1.26
USP39-210ENST00000459775 KTN1-AS1Q86SY8 53 aa7.17□□□□□ -1.26
USP39-210ENST00000459775 PRO0255Q9UI72 69 aa7.17□□□□□ -1.26
USP39-210ENST00000459775 TRBV6-4A0A1B0GX49 114 aa7.16□□□□□ -1.26
USP39-210ENST00000459775 J3QL48 77 aa7.16□□□□□ -1.26
USP39-210ENST00000459775 POLR2KP53803 58 aaKnown RBP7.16□□□□□ -1.26
USP39-210ENST00000459775 C15orf53Q8NAA6 179 aa7.16□□□□□ -1.26
USP39-210ENST00000459775 TRBV7-3A0A075B6L6 115 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 171.7 ms