RNA–Protein interactions for RNA: ENST00000458013.6

SNX27-204, Transcript of sorting nexin family member 27, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SNX27, Length 6,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-204ENST00000458013 A0A087WVE0 104 aa14.29□□□□□ -0.12
SNX27-204ENST00000458013 SERP2Q8N6R1 65 aa14.29□□□□□ -0.12
SNX27-204ENST00000458013 EBI3Q14213 229 aa14.29□□□□□ -0.12
SNX27-204ENST00000458013 UNQ6190/PRO20217Q6UXQ8 127 aa14.29□□□□□ -0.12
SNX27-204ENST00000458013 MED12LQ86YW9 2145 aa14.28□□□□□ -0.12
SNX27-204ENST00000458013 ZNF580Q9UK33 172 aa14.28□□□□□ -0.12
SNX27-204ENST00000458013 PYGO1Q9Y3Y4 419 aa14.28□□□□□ -0.12
SNX27-204ENST00000458013 Q8N9L7 120 aa14.28□□□□□ -0.12
SNX27-204ENST00000458013 C6orf223Q8N319 242 aa14.27□□□□□ -0.12
SNX27-204ENST00000458013 CEP192Q8TEP8 1941 aa14.27□□□□□ -0.12
SNX27-204ENST00000458013 M0QXV9 152 aa14.27□□□□□ -0.13
SNX27-204ENST00000458013 AVPP01185 164 aa14.27□□□□□ -0.13
SNX27-204ENST00000458013 Q6ZVQ6 151 aa14.27□□□□□ -0.13
SNX27-204ENST00000458013 LTBP2Q14767 1821 aa14.27□□□□□ -0.13
SNX27-204ENST00000458013 V9GYY9 64 aa14.26□□□□□ -0.13
SNX27-204ENST00000458013 TNCP24821 2201 aa14.26□□□□□ -0.13
SNX27-204ENST00000458013 C10orf25Q5T742 122 aa14.26□□□□□ -0.13
SNX27-204ENST00000458013 IGHV6-1A0A0B4J1U7 121 aa14.26□□□□□ -0.13
SNX27-204ENST00000458013 ZNF706Q9Y5V0 76 aaPredicted RBP14.25□□□□□ -0.13
SNX27-204ENST00000458013 SPTAN1Q13813 2472 aaKnown RBP14.25□□□□□ -0.13
SNX27-204ENST00000458013 PLA2G2AP14555 144 aa14.25□□□□□ -0.13
SNX27-204ENST00000458013 CDC42SE2Q9NRR3 84 aa14.25□□□□□ -0.13
SNX27-204ENST00000458013 SPINK1P00995 79 aa14.24□□□□□ -0.13
SNX27-204ENST00000458013 Q8N6K4 173 aa14.24□□□□□ -0.13
SNX27-204ENST00000458013 KLLNB2CW77 178 aa14.24□□□□□ -0.13
SNX27-204ENST00000458013 PCOTHQ58A44 107 aa14.24□□□□□ -0.13
SNX27-204ENST00000458013 MED13LQ71F56 2210 aa14.23□□□□□ -0.13
SNX27-204ENST00000458013 IGLV4-60A0A075B6I1 120 aa14.23□□□□□ -0.13
SNX27-204ENST00000458013 TSPEAR-AS2P59090 65 aa14.22□□□□□ -0.13
SNX27-204ENST00000458013 SRCAPQ6ZRS2 3230 aa14.22□□□□□ -0.13
SNX27-204ENST00000458013 TRBV10-3A0A0K0K1G6 114 aa14.21□□□□□ -0.13
SNX27-204ENST00000458013 KRTAP10-9P60411 292 aa14.21□□□□□ -0.13
SNX27-204ENST00000458013 IGLV1-40P01703 118 aa14.21□□□□□ -0.13
SNX27-204ENST00000458013 COX7CP15954 63 aa14.21□□□□□ -0.14
SNX27-204ENST00000458013 POLR2KP53803 58 aaKnown RBP14.2□□□□□ -0.14
SNX27-204ENST00000458013 RAI1Q7Z5J4 1906 aaPredicted RBP14.2□□□□□ -0.14
SNX27-204ENST00000458013 A8MTW9 85 aa14.19□□□□□ -0.14
SNX27-204ENST00000458013 NBASA2RRP1 2371 aa14.19□□□□□ -0.14
SNX27-204ENST00000458013 REG3GQ6UW15 175 aa14.18□□□□□ -0.14
SNX27-204ENST00000458013 LINC00208Q96KT6 92 aa14.18□□□□□ -0.14
SNX27-204ENST00000458013 MRPS36P82909 103 aaKnown RBP14.17□□□□□ -0.14
SNX27-204ENST00000458013 MRGPRG-AS1Q2M3A8 158 aa14.17□□□□□ -0.14
SNX27-204ENST00000458013 LINC00242Q5T6M2 205 aa14.17□□□□□ -0.14
SNX27-204ENST00000458013 ADAMTSL4-AS1Q5T5F5 129 aa14.17□□□□□ -0.14
SNX27-204ENST00000458013 Q8IZM0 81 aa14.17□□□□□ -0.14
SNX27-204ENST00000458013 Q6ZSN1 163 aa14.16□□□□□ -0.14
SNX27-204ENST00000458013 Q8N814 137 aa14.16□□□□□ -0.14
SNX27-204ENST00000458013 CHCHD7Q9BUK0 85 aa14.16□□□□□ -0.14
SNX27-204ENST00000458013 ATG2AQ2TAZ0 1938 aa14.16□□□□□ -0.14
SNX27-204ENST00000458013 COX17Q14061 63 aa14.16□□□□□ -0.14
SNX27-204ENST00000458013 BEAN1Q3B7T3 259 aa14.16□□□□□ -0.14
SNX27-204ENST00000458013 URB1-AS1Q96HZ7 61 aa14.16□□□□□ -0.14
SNX27-204ENST00000458013 DSCAMO60469 2012 aa14.16□□□□□ -0.14
SNX27-204ENST00000458013 IGIPA6NJ69 53 aa14.16□□□□□ -0.14
SNX27-204ENST00000458013 PSPHP1O15172 72 aa14.15□□□□□ -0.14
SNX27-204ENST00000458013 HCFC1P51610 2035 aa14.15□□□□□ -0.14
SNX27-204ENST00000458013 C1orf195Q5TG92 126 aa14.15□□□□□ -0.14
SNX27-204ENST00000458013 LINC01556Q5JQF7 62 aa14.15□□□□□ -0.15
SNX27-204ENST00000458013 IGLV5-52A0A0A0MRZ9 124 aa14.14□□□□□ -0.15
SNX27-204ENST00000458013 RIF1Q5UIP0 2472 aaKnown RBP14.14□□□□□ -0.15
SNX27-204ENST00000458013 C1orf137Q5JT78 98 aa14.14□□□□□ -0.15
SNX27-204ENST00000458013 NTM-AS1Q6ZSK4 140 aa14.14□□□□□ -0.15
SNX27-204ENST00000458013 Q6ZTC4 211 aa14.13□□□□□ -0.15
SNX27-204ENST00000458013 LINC01547P58512 204 aaPredicted RBP14.13□□□□□ -0.15
SNX27-204ENST00000458013 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP14.13□□□□□ -0.15
SNX27-204ENST00000458013 SMIM1B2RUZ4 78 aa14.12□□□□□ -0.15
SNX27-204ENST00000458013 NDUFC1O43677 76 aa14.12□□□□□ -0.15
SNX27-204ENST00000458013 Q6JHZ5 121 aa14.12□□□□□ -0.15
SNX27-204ENST00000458013 ATP5EP56381 51 aaPredicted RBP14.11□□□□□ -0.15
SNX27-204ENST00000458013 LINC00310P59036 64 aa14.11□□□□□ -0.15
SNX27-204ENST00000458013 ODF3L2Q3SX64 289 aa14.11□□□□□ -0.15
SNX27-204ENST00000458013 SBSPONQ8IVN8 264 aa14.11□□□□□ -0.15
SNX27-204ENST00000458013 Q9UF83 564 aa14.11□□□□□ -0.15
SNX27-204ENST00000458013 TRBV7-6A0A0J9YX20 115 aa14.1□□□□□ -0.15
SNX27-204ENST00000458013 NUPR2A6NF83 97 aa14.1□□□□□ -0.15
SNX27-204ENST00000458013 Q9BRP9 147 aa14.08□□□□□ -0.16
SNX27-204ENST00000458013 EXPH5Q8NEV8 1989 aa14.08□□□□□ -0.16
SNX27-204ENST00000458013 FHL2Q14192 279 aa14.07□□□□□ -0.16
SNX27-204ENST00000458013 LINC00575Q6W349 94 aa14.07□□□□□ -0.16
SNX27-204ENST00000458013 FSTL3O95633 263 aa14.06□□□□□ -0.16
SNX27-204ENST00000458013 ARHGAP32A7KAX9 2087 aa14.06□□□□□ -0.16
SNX27-204ENST00000458013 TECTAO75443 2155 aa14.06□□□□□ -0.16
SNX27-204ENST00000458013 EML5Q05BV3 1969 aa14.05□□□□□ -0.16
SNX27-204ENST00000458013 IMUPQ9GZP8 106 aa14.05□□□□□ -0.16
SNX27-204ENST00000458013 LINC00474Q9P2X8 69 aa14.05□□□□□ -0.16
SNX27-204ENST00000458013 PRYO14603 147 aa14.04□□□□□ -0.16
SNX27-204ENST00000458013 ZFHX2Q9C0A1 2572 aaPredicted RBP14.04□□□□□ -0.16
SNX27-204ENST00000458013 CRYGAP11844 174 aa14.04□□□□□ -0.16
SNX27-204ENST00000458013 RPL28P46779 137 aaKnown RBP14.03□□□□□ -0.16
SNX27-204ENST00000458013 PMAIP1Q13794 54 aa14.02□□□□□ -0.16
SNX27-204ENST00000458013 CACNA1HO95180 2353 aa14.02□□□□□ -0.16
SNX27-204ENST00000458013 PRLHP81277 87 aa14.02□□□□□ -0.17
SNX27-204ENST00000458013 TRAV7A0A075B6U4 112 aa14□□□□□ -0.17
SNX27-204ENST00000458013 A0A087WSZ3 146 aa14□□□□□ -0.17
SNX27-204ENST00000458013 H0Y9P7 68 aa13.99□□□□□ -0.17
SNX27-204ENST00000458013 PTPRSQ13332 1948 aa13.99□□□□□ -0.17
SNX27-204ENST00000458013 PRR14LQ5THK1 2151 aa13.99□□□□□ -0.17
SNX27-204ENST00000458013 Q8N3U1 123 aa13.98□□□□□ -0.17
SNX27-204ENST00000458013 MUC22E2RYF6 1773 aaPredicted RBP13.98□□□□□ -0.17
SNX27-204ENST00000458013 EGFEM1PQ0D2K5 195 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms