RNA–Protein interactions for RNA: ENST00000456315.6

DEPDC1-202, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene DEPDC1, Length 5,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-202ENST00000456315 RPL35AP18077 110 aaKnown RBP3.22□□□□□ -1.89
DEPDC1-202ENST00000456315 NANOS2P60321 138 aaKnown RBP3.22□□□□□ -1.89
DEPDC1-202ENST00000456315 LINC00308Q8TCZ7 52 aa3.22□□□□□ -1.89
DEPDC1-202ENST00000456315 PIMREGQ9BSJ6 248 aa3.22□□□□□ -1.89
DEPDC1-202ENST00000456315 C14orf132Q9NPU4 83 aa3.22□□□□□ -1.89
DEPDC1-202ENST00000456315 IGHV1-69DA0A0B4J2H0 117 aa3.22□□□□□ -1.89
DEPDC1-202ENST00000456315 C5orf47Q569G3 176 aa3.22□□□□□ -1.89
DEPDC1-202ENST00000456315 LINC00467Q9BRT7 94 aa3.22□□□□□ -1.89
DEPDC1-202ENST00000456315 TRBV6-5A0A0K0K1A5 114 aa3.22□□□□□ -1.89
DEPDC1-202ENST00000456315 A0A1B0GX51 115 aa3.22□□□□□ -1.89
DEPDC1-202ENST00000456315 A8MTW9 85 aa3.22□□□□□ -1.89
DEPDC1-202ENST00000456315 KRTAP17-1Q9BYP8 105 aa3.22□□□□□ -1.89
DEPDC1-202ENST00000456315 TRAV13-1A0A0B4J241 112 aa3.22□□□□□ -1.89
DEPDC1-202ENST00000456315 H7BZZ5 65 aa3.22□□□□□ -1.89
DEPDC1-202ENST00000456315 MIAQ16674 131 aa3.22□□□□□ -1.89
DEPDC1-202ENST00000456315 Q1RN00 199 aa3.22□□□□□ -1.89
DEPDC1-202ENST00000456315 C19orf54Q5BKX5 351 aa3.22□□□□□ -1.89
DEPDC1-202ENST00000456315 RBMY1BA6NDE4 496 aaKnown RBP3.21□□□□□ -1.9
DEPDC1-202ENST00000456315 RBMY1EA6NEQ0 496 aaKnown RBP3.21□□□□□ -1.9
DEPDC1-202ENST00000456315 RBMY1DP0C7P1 496 aaKnown RBP3.21□□□□□ -1.9
DEPDC1-202ENST00000456315 SPINK13Q1W4C9 94 aa3.21□□□□□ -1.9
DEPDC1-202ENST00000456315 FAM229BQ4G0N7 80 aa3.21□□□□□ -1.9
DEPDC1-202ENST00000456315 LINC00643Q86TS7 51 aa3.21□□□□□ -1.9
DEPDC1-202ENST00000456315 GAGE2AQ6NT46 116 aa3.21□□□□□ -1.9
DEPDC1-202ENST00000456315 CHCHD7Q9BUK0 85 aa3.21□□□□□ -1.9
DEPDC1-202ENST00000456315 IGHV1-58A0A0C4DH39 117 aa3.21□□□□□ -1.9
DEPDC1-202ENST00000456315 USP17L23D6RBM5 183 aa3.21□□□□□ -1.9
DEPDC1-202ENST00000456315 ATXN8Q156A1 80 aa3.21□□□□□ -1.9
DEPDC1-202ENST00000456315 J3QLI3 93 aa3.21□□□□□ -1.9
DEPDC1-202ENST00000456315 IGHV3-16A0A0C4DH30 117 aa3.2□□□□□ -1.9
DEPDC1-202ENST00000456315 F5H697 171 aa3.2□□□□□ -1.9
DEPDC1-202ENST00000456315 NCR3O14931 201 aa3.2□□□□□ -1.9
DEPDC1-202ENST00000456315 RPS28P62857 69 aaKnown RBP3.2□□□□□ -1.9
DEPDC1-202ENST00000456315 KLK9Q2XQG4 91 aa3.2□□□□□ -1.9
DEPDC1-202ENST00000456315 C9orf85Q96MD7 179 aa3.2□□□□□ -1.9
DEPDC1-202ENST00000456315 SIRPDQ9H106 197 aa3.2□□□□□ -1.9
DEPDC1-202ENST00000456315 SMIM1B2RUZ4 78 aa3.2□□□□□ -1.9
DEPDC1-202ENST00000456315 HTN1P15515 57 aa3.2□□□□□ -1.9
DEPDC1-202ENST00000456315 PKIGQ9Y2B9 76 aa3.2□□□□□ -1.9
DEPDC1-202ENST00000456315 DNHD1Q96M86 4753 aa3.2□□□□□ -1.9
DEPDC1-202ENST00000456315 VCYO14598 125 aa3.2□□□□□ -1.9
DEPDC1-202ENST00000456315 DEFB109BQ30KR1 87 aa3.2□□□□□ -1.9
DEPDC1-202ENST00000456315 BRD3OSQ6XYD6 125 aa3.2□□□□□ -1.9
DEPDC1-202ENST00000456315 C16orf92Q96LL3 132 aa3.2□□□□□ -1.9
DEPDC1-202ENST00000456315 LEPROTO15243 131 aa3.2□□□□□ -1.9
DEPDC1-202ENST00000456315 SAA4P35542 130 aa3.2□□□□□ -1.9
DEPDC1-202ENST00000456315 C20orf197Q8N268 126 aa3.2□□□□□ -1.9
DEPDC1-202ENST00000456315 A0A0J9YX75 114 aa3.19□□□□□ -1.9
DEPDC1-202ENST00000456315 LGALS3P17931 250 aaKnown RBP3.19□□□□□ -1.9
DEPDC1-202ENST00000456315 TMEM30BQ3MIR4 351 aa3.19□□□□□ -1.9
DEPDC1-202ENST00000456315 NUP37Q8NFH4 326 aa3.19□□□□□ -1.9
DEPDC1-202ENST00000456315 IGLV5-39A0A0G2JS06 123 aa3.19□□□□□ -1.9
DEPDC1-202ENST00000456315 PRB1P04280 392 aa3.19□□□□□ -1.9
DEPDC1-202ENST00000456315 TRAV23DV6A0A075B6W5 121 aa3.19□□□□□ -1.9
DEPDC1-202ENST00000456315 COX7A2LO14548 114 aa3.19□□□□□ -1.9
DEPDC1-202ENST00000456315 PLA2G2CQ5R387 149 aa3.19□□□□□ -1.9
DEPDC1-202ENST00000456315 MIR7-3HGQ8N6C7 128 aa3.19□□□□□ -1.9
DEPDC1-202ENST00000456315 IMUPQ9GZP8 106 aa3.19□□□□□ -1.9
DEPDC1-202ENST00000456315 TINCRA0A1B0GVN0 87 aa3.18□□□□□ -1.9
DEPDC1-202ENST00000456315 MINOS1Q5TGZ0 78 aa3.18□□□□□ -1.9
DEPDC1-202ENST00000456315 TMEM86BQ8N661 226 aa3.18□□□□□ -1.9
DEPDC1-202ENST00000456315 OBSCN-AS1Q96MR7 158 aa3.18□□□□□ -1.9
DEPDC1-202ENST00000456315 TRAV10A0A0B4J240 114 aa3.18□□□□□ -1.9
DEPDC1-202ENST00000456315 TRAV21A0A0B4J279 112 aa3.18□□□□□ -1.9
DEPDC1-202ENST00000456315 RPL18AQ02543 176 aaKnown RBP3.18□□□□□ -1.9
DEPDC1-202ENST00000456315 WFDC11Q8NEX6 87 aa3.18□□□□□ -1.9
DEPDC1-202ENST00000456315 RHPN1-AS1Q9BWJ2 59 aa3.18□□□□□ -1.9
DEPDC1-202ENST00000456315 SPANXDQ9BXN6 97 aa3.18□□□□□ -1.9
DEPDC1-202ENST00000456315 SPANXCQ9NY87 97 aa3.18□□□□□ -1.9
DEPDC1-202ENST00000456315 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.18□□□□□ -1.9
DEPDC1-202ENST00000456315 LRRC75A-AS1Q8N1F1 130 aa3.18□□□□□ -1.9
DEPDC1-202ENST00000456315 UBTD1Q9HAC8 227 aa3.18□□□□□ -1.9
DEPDC1-202ENST00000456315 PEMTQ9UBM1 199 aa3.18□□□□□ -1.9
DEPDC1-202ENST00000456315 J3KT08 172 aa3.17□□□□□ -1.9
DEPDC1-202ENST00000456315 K7EQG2 157 aa3.17□□□□□ -1.9
DEPDC1-202ENST00000456315 PRORYQ9H606 182 aa3.17□□□□□ -1.9
DEPDC1-202ENST00000456315 IGLV5-45A0A087WSX0 123 aa3.17□□□□□ -1.9
DEPDC1-202ENST00000456315 LMO4P61968 165 aa3.17□□□□□ -1.9
DEPDC1-202ENST00000456315 C5orf56Q8N8D9 126 aa3.17□□□□□ -1.9
DEPDC1-202ENST00000456315 SMIM11BQ8TCY0 68 aa3.17□□□□□ -1.9
DEPDC1-202ENST00000456315 RNF5Q99942 180 aa3.17□□□□□ -1.9
DEPDC1-202ENST00000456315 FAM236DA0A1B0GTK5 79 aa3.17□□□□□ -1.9
DEPDC1-202ENST00000456315 FAM236CP0DP71 79 aa3.17□□□□□ -1.9
DEPDC1-202ENST00000456315 CXCL5P42830 114 aa3.17□□□□□ -1.9
DEPDC1-202ENST00000456315 LENEPQ9Y5L5 61 aa3.17□□□□□ -1.9
DEPDC1-202ENST00000456315 PFN2P35080 140 aa3.17□□□□□ -1.9
DEPDC1-202ENST00000456315 KLRB1Q12918 225 aa3.17□□□□□ -1.9
DEPDC1-202ENST00000456315 FAM110DQ8TAY7 271 aaPredicted RBP3.17□□□□□ -1.9
DEPDC1-202ENST00000456315 ESM1Q9NQ30 184 aa3.17□□□□□ -1.9
DEPDC1-202ENST00000456315 CCL18P55774 89 aa3.16□□□□□ -1.9
DEPDC1-202ENST00000456315 C18orf65Q6ZTR6 163 aa3.16□□□□□ -1.9
DEPDC1-202ENST00000456315 SERP2Q8N6R1 65 aa3.16□□□□□ -1.9
DEPDC1-202ENST00000456315 RMI2Q96E14 147 aa3.16□□□□□ -1.9
DEPDC1-202ENST00000456315 TMEM141Q96I45 108 aa3.16□□□□□ -1.9
DEPDC1-202ENST00000456315 DNAH6Q9C0G6 4158 aa3.16□□□□□ -1.9
DEPDC1-202ENST00000456315 LECT2O14960 151 aa3.16□□□□□ -1.9
DEPDC1-202ENST00000456315 CD28P10747 220 aa3.16□□□□□ -1.9
DEPDC1-202ENST00000456315 DYNLRB1Q9NP97 96 aa3.16□□□□□ -1.9
DEPDC1-202ENST00000456315 SNURFQ9Y675 71 aa3.16□□□□□ -1.9
DEPDC1-202ENST00000456315 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 1475.1 ms