RNA–Protein interactions for RNA: ENST00000456089.1

TREX1-203, Transcript of three prime repair exonuclease 1, humanhuman

TSL 3 BASIC

Gene TREX1, Length 629 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-203ENST00000456089 Q6ZN92 141 aa8.23□□□□□ -1.09
TREX1-203ENST00000456089 C5orf38Q86SI9 138 aa8.23□□□□□ -1.09
TREX1-203ENST00000456089 CARD19Q96LW7 228 aa8.23□□□□□ -1.09
TREX1-203ENST00000456089 OPRPNQ99935 248 aaPredicted RBP8.23□□□□□ -1.09
TREX1-203ENST00000456089 CYSLTR1Q9Y271 337 aa8.23□□□□□ -1.09
TREX1-203ENST00000456089 SYCNQ0VAF6 134 aa8.22□□□□□ -1.09
TREX1-203ENST00000456089 NDUFA5Q16718 116 aa8.22□□□□□ -1.09
TREX1-203ENST00000456089 KIAA1644Q3SXP7 199 aa8.22□□□□□ -1.09
TREX1-203ENST00000456089 COX19Q49B96 90 aa8.22□□□□□ -1.09
TREX1-203ENST00000456089 SERTAD4-AS1Q5TG53 156 aa8.22□□□□□ -1.09
TREX1-203ENST00000456089 LINC00526Q96FQ7 95 aa8.22□□□□□ -1.09
TREX1-203ENST00000456089 TMEM141Q96I45 108 aa8.22□□□□□ -1.09
TREX1-203ENST00000456089 C2orf88Q9BSF0 95 aa8.22□□□□□ -1.09
TREX1-203ENST00000456089 PYGO1Q9Y3Y4 419 aa8.22□□□□□ -1.09
TREX1-203ENST00000456089 UBR4Q5T4S7 5183 aa8.21□□□□□ -1.09
TREX1-203ENST00000456089 TGIF2-C20orf24A0A0A6YYL0 155 aa8.21□□□□□ -1.1
TREX1-203ENST00000456089 IGKV2-24A0A0C4DH68 120 aa8.21□□□□□ -1.1
TREX1-203ENST00000456089 MAJINQ3KP22 176 aa8.21□□□□□ -1.1
TREX1-203ENST00000456089 C2orf66Q6UXQ4 117 aa8.21□□□□□ -1.1
TREX1-203ENST00000456089 TEX43Q6ZNM6 134 aa8.21□□□□□ -1.1
TREX1-203ENST00000456089 PRSS3P2Q8NHM4 247 aa8.21□□□□□ -1.1
TREX1-203ENST00000456089 GNB1LQ9BYB4 327 aa8.21□□□□□ -1.1
TREX1-203ENST00000456089 CARHSP1Q9Y2V2 147 aaKnown RBP8.21□□□□□ -1.1
TREX1-203ENST00000456089 IGLV4-69A0A075B6H9 119 aa8.2□□□□□ -1.1
TREX1-203ENST00000456089 C10orf91Q5T1B1 145 aa8.2□□□□□ -1.1
TREX1-203ENST00000456089 SPACA4Q8TDM5 124 aa8.2□□□□□ -1.1
TREX1-203ENST00000456089 CAMK2N2Q96S95 79 aa8.2□□□□□ -1.1
TREX1-203ENST00000456089 LINC00474Q9P2X8 69 aa8.2□□□□□ -1.1
TREX1-203ENST00000456089 IGLV4-3A0A075B6K6 122 aa8.19□□□□□ -1.1
TREX1-203ENST00000456089 A0A087WYN8 130 aa8.19□□□□□ -1.1
TREX1-203ENST00000456089 MT-ND6P03923 174 aa8.19□□□□□ -1.1
TREX1-203ENST00000456089 SPAG11BQ08648 103 aa8.19□□□□□ -1.1
TREX1-203ENST00000456089 CIRBPQ14011 172 aaKnown RBP8.19□□□□□ -1.1
TREX1-203ENST00000456089 VCX2Q9H322 139 aa8.19□□□□□ -1.1
TREX1-203ENST00000456089 PLA2G2DQ9UNK4 145 aa8.19□□□□□ -1.1
TREX1-203ENST00000456089 APOC3P02656 99 aa8.18□□□□□ -1.1
TREX1-203ENST00000456089 FABP9Q0Z7S8 132 aa8.18□□□□□ -1.1
TREX1-203ENST00000456089 PAPPA-AS1Q5QFB9 102 aa8.18□□□□□ -1.1
TREX1-203ENST00000456089 OR10D4PQ8NGN7 298 aa8.18□□□□□ -1.1
TREX1-203ENST00000456089 ORAOV1Q8WV07 137 aa8.18□□□□□ -1.1
TREX1-203ENST00000456089 C2orf48Q96LS8 159 aa8.18□□□□□ -1.1
TREX1-203ENST00000456089 IGHV3OR16-9A0A0B4J2B5 98 aa8.17□□□□□ -1.1
TREX1-203ENST00000456089 SNAPINO95295 136 aa8.17□□□□□ -1.1
TREX1-203ENST00000456089 NPSP0C0P6 89 aa8.17□□□□□ -1.1
TREX1-203ENST00000456089 MT1HL1P0DM35 61 aa8.17□□□□□ -1.1
TREX1-203ENST00000456089 SVBPQ8N300 66 aa8.17□□□□□ -1.1
TREX1-203ENST00000456089 STPG4Q8N801 248 aa8.17□□□□□ -1.1
TREX1-203ENST00000456089 C7orf33Q8WU49 177 aa8.17□□□□□ -1.1
TREX1-203ENST00000456089 FAM104AQ969W3 186 aa8.17□□□□□ -1.1
TREX1-203ENST00000456089 MRPL18Q9H0U6 180 aaKnown RBP8.17□□□□□ -1.1
TREX1-203ENST00000456089 A0A096LNI7 61 aa8.16□□□□□ -1.1
TREX1-203ENST00000456089 LOC107984640A0A0U1RRK4 108 aa8.16□□□□□ -1.1
TREX1-203ENST00000456089 Q6ZRU5 148 aa8.16□□□□□ -1.1
TREX1-203ENST00000456089 SMCO4Q9NRQ5 59 aa8.16□□□□□ -1.1
TREX1-203ENST00000456089 PLAC8Q9NZF1 115 aa8.16□□□□□ -1.1
TREX1-203ENST00000456089 F8WDY8 70 aa8.15□□□□□ -1.1
TREX1-203ENST00000456089 GAGE2BQ13066 116 aa8.15□□□□□ -1.1
TREX1-203ENST00000456089 LINC00242Q5T6M2 205 aa8.15□□□□□ -1.1
TREX1-203ENST00000456089 FA2HQ7L5A8 372 aa8.15□□□□□ -1.1
TREX1-203ENST00000456089 ALKBH7Q9BT30 221 aaPredicted RBP8.15□□□□□ -1.1
TREX1-203ENST00000456089 LINC01549A6NIU2 74 aa8.14□□□□□ -1.11
TREX1-203ENST00000456089 IGIPA6NJ69 53 aa8.14□□□□□ -1.11
TREX1-203ENST00000456089 NDUFA1O15239 70 aa8.14□□□□□ -1.11
TREX1-203ENST00000456089 UBE2D1P51668 147 aa8.14□□□□□ -1.11
TREX1-203ENST00000456089 SEC11AP67812 179 aa8.14□□□□□ -1.11
TREX1-203ENST00000456089 TOMM6Q96B49 74 aa8.14□□□□□ -1.11
TREX1-203ENST00000456089 SCGB3A1Q96QR1 104 aa8.14□□□□□ -1.11
TREX1-203ENST00000456089 TRAPPC1Q9Y5R8 145 aa8.14□□□□□ -1.11
TREX1-203ENST00000456089 TNXBP22105 4242 aa8.14□□□□□ -1.11
TREX1-203ENST00000456089 A0A087WZ39 114 aa8.13□□□□□ -1.11
TREX1-203ENST00000456089 RPL18AQ02543 176 aaKnown RBP8.13□□□□□ -1.11
TREX1-203ENST00000456089 ZC2HC1BQ5TFG8 222 aa8.13□□□□□ -1.11
TREX1-203ENST00000456089 AMELXQ99217 191 aa8.13□□□□□ -1.11
TREX1-203ENST00000456089 TIMM17AQ99595 171 aa8.13□□□□□ -1.11
TREX1-203ENST00000456089 GEMIN7Q9H840 131 aaKnown RBP8.13□□□□□ -1.11
TREX1-203ENST00000456089 PRSS2P07478 247 aa8.12□□□□□ -1.11
TREX1-203ENST00000456089 PTTG1IPP53801 180 aa8.12□□□□□ -1.11
TREX1-203ENST00000456089 ODF1Q14990 250 aa8.12□□□□□ -1.11
TREX1-203ENST00000456089 RNF151Q2KHN1 245 aa8.12□□□□□ -1.11
TREX1-203ENST00000456089 ERASQ7Z444 233 aa8.12□□□□□ -1.11
TREX1-203ENST00000456089 PACRGQ96M98 296 aaPredicted RBP8.12□□□□□ -1.11
TREX1-203ENST00000456089 HERVK_113P63121 156 aa8.11□□□□□ -1.11
TREX1-203ENST00000456089 LINC01561Q8N1V8 128 aa8.11□□□□□ -1.11
TREX1-203ENST00000456089 MRPL35Q9NZE8 188 aaKnown RBP8.11□□□□□ -1.11
TREX1-203ENST00000456089 A0A0J9YXV3 536 aa8.1□□□□□ -1.11
TREX1-203ENST00000456089 LINC00173Q6ZV60 143 aa8.1□□□□□ -1.11
TREX1-203ENST00000456089 LINC01546A6NGU7 62 aa8.09□□□□□ -1.11
TREX1-203ENST00000456089 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.09□□□□□ -1.11
TREX1-203ENST00000456089 CKS1BP61024 79 aa8.09□□□□□ -1.11
TREX1-203ENST00000456089 UNQ6190/PRO20217Q6UXQ8 127 aa8.09□□□□□ -1.11
TREX1-203ENST00000456089 TOMM7Q9P0U1 55 aa8.09□□□□□ -1.11
TREX1-203ENST00000456089 RAB5BP61020 215 aa8.08□□□□□ -1.12
TREX1-203ENST00000456089 PRR3P79522 188 aaKnown RBP8.08□□□□□ -1.12
TREX1-203ENST00000456089 C6orf226Q5I0X4 101 aa8.08□□□□□ -1.12
TREX1-203ENST00000456089 LINC00614P0C842 121 aa8.07□□□□□ -1.12
TREX1-203ENST00000456089 C10orf25Q5T742 122 aa8.07□□□□□ -1.12
TREX1-203ENST00000456089 FAM19A3Q7Z5A8 133 aa8.07□□□□□ -1.12
TREX1-203ENST00000456089 LINC00469Q8N7U9 141 aa8.07□□□□□ -1.12
TREX1-203ENST00000456089 TRBV30A0A0K0K1B3 111 aa8.06□□□□□ -1.12
TREX1-203ENST00000456089 NDUFA6P56556 154 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms