RNA–Protein interactions for RNA: ENST00000455302.5

LSMEM1-203, Transcript of leucine rich single-pass membrane protein 1, humanhuman

TSL 2

Gene LSMEM1, Length 819 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1-203ENST00000455302 GCHFRP30047 84 aa3.89□□□□□ -1.79
LSMEM1-203ENST00000455302 CDC34P49427 236 aaPredicted RBP3.89□□□□□ -1.79
LSMEM1-203ENST00000455302 DEFA3P59666 94 aa3.89□□□□□ -1.79
LSMEM1-203ENST00000455302 SYCNQ0VAF6 134 aa3.89□□□□□ -1.79
LSMEM1-203ENST00000455302 C9orf116Q5BN46 136 aaPredicted RBP3.89□□□□□ -1.79
LSMEM1-203ENST00000455302 LCE1EQ5T753 118 aa3.89□□□□□ -1.79
LSMEM1-203ENST00000455302 SPANXN1Q5VSR9 72 aa3.89□□□□□ -1.79
LSMEM1-203ENST00000455302 CBLN2Q8IUK8 224 aa3.89□□□□□ -1.79
LSMEM1-203ENST00000455302 OR10AG1Q8NH19 301 aa3.89□□□□□ -1.79
LSMEM1-203ENST00000455302 IGHV1-58A0A0C4DH39 117 aa3.88□□□□□ -1.79
LSMEM1-203ENST00000455302 MUC21A0A140T8X8 626 aa3.88□□□□□ -1.79
LSMEM1-203ENST00000455302 MGPP08493 103 aa3.88□□□□□ -1.79
LSMEM1-203ENST00000455302 RPL12P30050 165 aaKnown RBP3.88□□□□□ -1.79
LSMEM1-203ENST00000455302 XCL1P47992 114 aa3.88□□□□□ -1.79
LSMEM1-203ENST00000455302 NKX2-5P52952 324 aaPredicted RBP3.88□□□□□ -1.79
LSMEM1-203ENST00000455302 ORMDL2Q53FV1 153 aa3.88□□□□□ -1.79
LSMEM1-203ENST00000455302 AMMECR1LQ6DCA0 310 aa3.88□□□□□ -1.79
LSMEM1-203ENST00000455302 AP1S3Q96PC3 154 aa3.88□□□□□ -1.79
LSMEM1-203ENST00000455302 TMEM167BQ9NRX6 74 aa3.88□□□□□ -1.79
LSMEM1-203ENST00000455302 HSPB11Q9Y547 144 aa3.88□□□□□ -1.79
LSMEM1-203ENST00000455302 SIX6O95475 246 aa3.87□□□□□ -1.79
LSMEM1-203ENST00000455302 CXorf1O96002 111 aa3.87□□□□□ -1.79
LSMEM1-203ENST00000455302 BCL2P10415 239 aa3.87□□□□□ -1.79
LSMEM1-203ENST00000455302 FGF6P10767 208 aa3.87□□□□□ -1.79
LSMEM1-203ENST00000455302 PFN2P35080 140 aa3.87□□□□□ -1.79
LSMEM1-203ENST00000455302 UBE2G1P62253 170 aa3.87□□□□□ -1.79
LSMEM1-203ENST00000455302 RPL18AQ02543 176 aaKnown RBP3.87□□□□□ -1.79
LSMEM1-203ENST00000455302 COTL1Q14019 142 aa3.87□□□□□ -1.79
LSMEM1-203ENST00000455302 ZFP30Q9Y2G7 519 aa3.87□□□□□ -1.79
LSMEM1-203ENST00000455302 A0A1W2PRE2 83 aa3.86□□□□□ -1.79
LSMEM1-203ENST00000455302 M0QY20 66 aa3.86□□□□□ -1.79
LSMEM1-203ENST00000455302 UBE2G2P60604 165 aa3.86□□□□□ -1.79
LSMEM1-203ENST00000455302 EIF5AL1Q6IS14 154 aaKnown RBP3.86□□□□□ -1.79
LSMEM1-203ENST00000455302 LINC01551Q86U37 167 aa3.86□□□□□ -1.79
LSMEM1-203ENST00000455302 TSKUQ8WUA8 353 aa3.86□□□□□ -1.79
LSMEM1-203ENST00000455302 HIST1H2BAQ96A08 127 aa3.86□□□□□ -1.79
LSMEM1-203ENST00000455302 RETNLBQ9BQ08 111 aa3.86□□□□□ -1.79
LSMEM1-203ENST00000455302 RPP21Q9H633 154 aaKnown RBP3.86□□□□□ -1.79
LSMEM1-203ENST00000455302 CARHSP1Q9Y2V2 147 aaKnown RBP3.86□□□□□ -1.79
LSMEM1-203ENST00000455302 CCL25O15444 150 aa3.85□□□□□ -1.79
LSMEM1-203ENST00000455302 LYRM1O43325 122 aa3.85□□□□□ -1.79
LSMEM1-203ENST00000455302 SNAI2O43623 268 aa3.85□□□□□ -1.79
LSMEM1-203ENST00000455302 APOMO95445 188 aa3.85□□□□□ -1.79
LSMEM1-203ENST00000455302 CRYGAP11844 174 aa3.85□□□□□ -1.79
LSMEM1-203ENST00000455302 IL7P13232 177 aa3.85□□□□□ -1.79
LSMEM1-203ENST00000455302 FMC1Q96HJ9 113 aa3.85□□□□□ -1.79
LSMEM1-203ENST00000455302 CAMK2N2Q96S95 79 aa3.85□□□□□ -1.79
LSMEM1-203ENST00000455302 WFDC1Q9HC57 220 aa3.85□□□□□ -1.79
LSMEM1-203ENST00000455302 IGLV4-69A0A075B6H9 119 aa3.84□□□□□ -1.79
LSMEM1-203ENST00000455302 IGHV3OR16-9A0A0B4J2B5 98 aa3.84□□□□□ -1.79
LSMEM1-203ENST00000455302 CXCL1P09341 107 aa3.84□□□□□ -1.79
LSMEM1-203ENST00000455302 OR5AL1P0C617 328 aa3.84□□□□□ -1.79
LSMEM1-203ENST00000455302 PET100P0DJ07 73 aa3.84□□□□□ -1.79
LSMEM1-203ENST00000455302 TPRXLQ17RH7 258 aa3.84□□□□□ -1.79
LSMEM1-203ENST00000455302 RASL11AQ6T310 242 aa3.84□□□□□ -1.79
LSMEM1-203ENST00000455302 KRTAP11-1Q8IUC1 163 aa3.84□□□□□ -1.79
LSMEM1-203ENST00000455302 OR5A1Q8NGJ0 315 aa3.84□□□□□ -1.79
LSMEM1-203ENST00000455302 TIMM17AQ99595 171 aa3.84□□□□□ -1.79
LSMEM1-203ENST00000455302 MED28Q9H204 178 aa3.84□□□□□ -1.79
LSMEM1-203ENST00000455302 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.83□□□□□ -1.8
LSMEM1-203ENST00000455302 A0A096LNJ9 63 aa3.83□□□□□ -1.8
LSMEM1-203ENST00000455302 LINC00959A0A1B0GUT2 108 aa3.83□□□□□ -1.8
LSMEM1-203ENST00000455302 IGKV2-29A2NJV5 120 aaPredicted RBP3.83□□□□□ -1.8
LSMEM1-203ENST00000455302 CCDC160A6NGH7 325 aa3.83□□□□□ -1.8
LSMEM1-203ENST00000455302 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.83□□□□□ -1.8
LSMEM1-203ENST00000455302 PLA2G10O15496 165 aa3.83□□□□□ -1.8
LSMEM1-203ENST00000455302 LTAP01374 205 aa3.83□□□□□ -1.8
LSMEM1-203ENST00000455302 UBE2BP63146 152 aa3.83□□□□□ -1.8
LSMEM1-203ENST00000455302 MEF2BQ02080 365 aaPredicted RBP3.83□□□□□ -1.8
LSMEM1-203ENST00000455302 FAM19A5Q7Z5A7 132 aaPredicted RBP3.83□□□□□ -1.8
LSMEM1-203ENST00000455302 NUP35Q8NFH5 326 aa3.83□□□□□ -1.8
LSMEM1-203ENST00000455302 PPP1R1CQ8WVI7 109 aa3.83□□□□□ -1.8
LSMEM1-203ENST00000455302 NKX6-2Q9C056 277 aaPredicted RBP3.83□□□□□ -1.8
LSMEM1-203ENST00000455302 NIT2Q9NQR4 276 aa3.83□□□□□ -1.8
LSMEM1-203ENST00000455302 AKR1C3P42330 323 aa3.82□□□□□ -1.8
LSMEM1-203ENST00000455302 SS18Q15532 418 aa3.82□□□□□ -1.8
LSMEM1-203ENST00000455302 LINC00469Q8N7U9 141 aa3.82□□□□□ -1.8
LSMEM1-203ENST00000455302 BTF3L4Q96K17 158 aa3.82□□□□□ -1.8
LSMEM1-203ENST00000455302 MPC2O95563 127 aa3.81□□□□□ -1.8
LSMEM1-203ENST00000455302 APCSP02743 223 aa3.81□□□□□ -1.8
LSMEM1-203ENST00000455302 ATP6V0CP27449 155 aa3.81□□□□□ -1.8
LSMEM1-203ENST00000455302 VAMP3Q15836 100 aa3.81□□□□□ -1.8
LSMEM1-203ENST00000455302 STOML3Q8TAV4 291 aa3.81□□□□□ -1.8
LSMEM1-203ENST00000455302 PSMG3Q9BT73 122 aaPredicted RBP3.81□□□□□ -1.8
LSMEM1-203ENST00000455302 C19orf71A6NCJ1 209 aa3.8□□□□□ -1.8
LSMEM1-203ENST00000455302 M0QXV9 152 aa3.8□□□□□ -1.8
LSMEM1-203ENST00000455302 COX7A2LO14548 114 aa3.8□□□□□ -1.8
LSMEM1-203ENST00000455302 ZNF25P17030 456 aaPredicted RBP3.8□□□□□ -1.8
LSMEM1-203ENST00000455302 NTF3P20783 257 aa3.8□□□□□ -1.8
LSMEM1-203ENST00000455302 SERF2P84101 59 aa3.8□□□□□ -1.8
LSMEM1-203ENST00000455302 CTXND1A0A1B0GTU2 59 aa3.79□□□□□ -1.8
LSMEM1-203ENST00000455302 A0A1B0GVX0 72 aa3.79□□□□□ -1.8
LSMEM1-203ENST00000455302 NCR2O95944 276 aa3.79□□□□□ -1.8
LSMEM1-203ENST00000455302 TLX1NBP0CAT3 122 aa3.79□□□□□ -1.8
LSMEM1-203ENST00000455302 TRGC1P0CF51 173 aa3.79□□□□□ -1.8
LSMEM1-203ENST00000455302 H2BFSP57053 126 aa3.79□□□□□ -1.8
LSMEM1-203ENST00000455302 DEFB116Q30KQ4 102 aa3.79□□□□□ -1.8
LSMEM1-203ENST00000455302 LCE3CQ5T5A8 94 aa3.79□□□□□ -1.8
LSMEM1-203ENST00000455302 Q8N9L7 120 aa3.79□□□□□ -1.8
LSMEM1-203ENST00000455302 OR2D3Q8NGH3 330 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms