RNA–Protein interactions for RNA: ENST00000454240.1

SMARCC1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 3

Gene SMARCC1, Length 636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-203ENST00000454240 RYR1P21817 5038 aa18.14■□□□□ 0.5
SMARCC1-203ENST00000454240 A0A096LNJ9 63 aa18.14■□□□□ 0.49
SMARCC1-203ENST00000454240 IGHV3OR16-9A0A0B4J2B5 98 aa18.14■□□□□ 0.49
SMARCC1-203ENST00000454240 UBE2D1P51668 147 aa18.14■□□□□ 0.49
SMARCC1-203ENST00000454240 C5orf38Q86SI9 138 aa18.14■□□□□ 0.49
SMARCC1-203ENST00000454240 C9orf163Q8N9P6 203 aa18.14■□□□□ 0.49
SMARCC1-203ENST00000454240 HSPG2P98160 4391 aa18.14■□□□□ 0.49
SMARCC1-203ENST00000454240 LINC00242Q5T6M2 205 aa18.13■□□□□ 0.49
SMARCC1-203ENST00000454240 MALP21145 153 aa18.11■□□□□ 0.49
SMARCC1-203ENST00000454240 FAM19A3Q7Z5A8 133 aa18.1■□□□□ 0.49
SMARCC1-203ENST00000454240 FAM30AQ9NZY2 134 aa18.1■□□□□ 0.49
SMARCC1-203ENST00000454240 XGP55808 180 aa18.09■□□□□ 0.49
SMARCC1-203ENST00000454240 COX6A2Q02221 97 aa18.09■□□□□ 0.49
SMARCC1-203ENST00000454240 HBDP02042 147 aa18.08■□□□□ 0.48
SMARCC1-203ENST00000454240 Q6ZSA8 131 aa18.08■□□□□ 0.48
SMARCC1-203ENST00000454240 CHCHD1Q96BP2 118 aaKnown RBP18.08■□□□□ 0.48
SMARCC1-203ENST00000454240 HERC2O95714 4834 aa18.08■□□□□ 0.48
SMARCC1-203ENST00000454240 TRAV16A0A0A6YYK6 109 aaPredicted RBP18.07■□□□□ 0.48
SMARCC1-203ENST00000454240 PMCHL1Q16048 86 aa18.07■□□□□ 0.48
SMARCC1-203ENST00000454240 APOMO95445 188 aa18.06■□□□□ 0.48
SMARCC1-203ENST00000454240 A0A087WZ39 114 aa18.05■□□□□ 0.48
SMARCC1-203ENST00000454240 ZNF561-AS1K7EIQ3 104 aa18.05■□□□□ 0.48
SMARCC1-203ENST00000454240 PDZD11Q5EBL8 140 aa18.05■□□□□ 0.48
SMARCC1-203ENST00000454240 LINC00526Q96FQ7 95 aa18.05■□□□□ 0.48
SMARCC1-203ENST00000454240 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP18.04■□□□□ 0.48
SMARCC1-203ENST00000454240 IGHV3-64A0A075B6Q5 118 aa18.03■□□□□ 0.48
SMARCC1-203ENST00000454240 SDIM1Q6ZPB5 146 aa18.03■□□□□ 0.48
SMARCC1-203ENST00000454240 BAGE3Q86Y29 109 aa18.03■□□□□ 0.48
SMARCC1-203ENST00000454240 CST9LQ9H4G1 147 aa18.03■□□□□ 0.48
SMARCC1-203ENST00000454240 SEC11AP67812 179 aa18.02■□□□□ 0.48
SMARCC1-203ENST00000454240 IGLV4-69A0A075B6H9 119 aa18.01■□□□□ 0.47
SMARCC1-203ENST00000454240 PMVKQ15126 192 aa18.01■□□□□ 0.47
SMARCC1-203ENST00000454240 OR10D4PQ8NGN7 298 aa18.01■□□□□ 0.47
SMARCC1-203ENST00000454240 S100A1P23297 94 aa18■□□□□ 0.47
SMARCC1-203ENST00000454240 LINC01561Q8N1V8 128 aa18■□□□□ 0.47
SMARCC1-203ENST00000454240 A0A0J9YXV3 536 aa17.99■□□□□ 0.47
SMARCC1-203ENST00000454240 HERVK_113P63121 156 aa17.99■□□□□ 0.47
SMARCC1-203ENST00000454240 ORAOV1Q8WV07 137 aa17.99■□□□□ 0.47
SMARCC1-203ENST00000454240 SPAG11BQ08648 103 aa17.98■□□□□ 0.47
SMARCC1-203ENST00000454240 ATP5LO75964 103 aa17.97■□□□□ 0.47
SMARCC1-203ENST00000454240 HAMPP81172 84 aa17.97■□□□□ 0.47
SMARCC1-203ENST00000454240 SYCNQ0VAF6 134 aa17.97■□□□□ 0.47
SMARCC1-203ENST00000454240 C2orf48Q96LS8 159 aa17.97■□□□□ 0.47
SMARCC1-203ENST00000454240 KRTAP17-1Q9BYP8 105 aa17.97■□□□□ 0.47
SMARCC1-203ENST00000454240 TINCRA0A1B0GVN0 87 aa17.96■□□□□ 0.47
SMARCC1-203ENST00000454240 ATP6V1G1O75348 118 aa17.96■□□□□ 0.47
SMARCC1-203ENST00000454240 HSBP1O75506 76 aa17.96■□□□□ 0.47
SMARCC1-203ENST00000454240 LINC00310P59036 64 aa17.96■□□□□ 0.47
SMARCC1-203ENST00000454240 CARD19Q96LW7 228 aa17.96■□□□□ 0.47
SMARCC1-203ENST00000454240 GEMIN7Q9H840 131 aaKnown RBP17.96■□□□□ 0.47
SMARCC1-203ENST00000454240 CDKN2A-AS1Q9UH64 79 aa17.95■□□□□ 0.46
SMARCC1-203ENST00000454240 SERF1AO75920 110 aa17.94■□□□□ 0.46
SMARCC1-203ENST00000454240 CHAC1Q9BUX1 264 aa17.94■□□□□ 0.46
SMARCC1-203ENST00000454240 FAM19A2Q8N3H0 131 aa17.93■□□□□ 0.46
SMARCC1-203ENST00000454240 CAMK2N2Q96S95 79 aa17.93■□□□□ 0.46
SMARCC1-203ENST00000454240 KIAA0087Q14695 138 aa17.92■□□□□ 0.46
SMARCC1-203ENST00000454240 Q6ZRU5 148 aa17.92■□□□□ 0.46
SMARCC1-203ENST00000454240 IGLV5-45A0A087WSX0 123 aa17.91■□□□□ 0.46
SMARCC1-203ENST00000454240 F8WDY8 70 aa17.91■□□□□ 0.46
SMARCC1-203ENST00000454240 NDUFA6P56556 154 aa17.91■□□□□ 0.46
SMARCC1-203ENST00000454240 SCXQ7RTU7 201 aa17.91■□□□□ 0.46
SMARCC1-203ENST00000454240 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP17.91■□□□□ 0.46
SMARCC1-203ENST00000454240 PANO1I0J062 215 aa17.9■□□□□ 0.46
SMARCC1-203ENST00000454240 Q8N1X5 172 aa17.9■□□□□ 0.46
SMARCC1-203ENST00000454240 NUPR1O60356 82 aa17.89■□□□□ 0.45
SMARCC1-203ENST00000454240 CIRBPQ14011 172 aaKnown RBP17.89■□□□□ 0.45
SMARCC1-203ENST00000454240 LINC00469Q8N7U9 141 aa17.89■□□□□ 0.45
SMARCC1-203ENST00000454240 HIST1H2BKO60814 126 aa17.88■□□□□ 0.45
SMARCC1-203ENST00000454240 HIST1H2BJP06899 126 aa17.88■□□□□ 0.45
SMARCC1-203ENST00000454240 IGLC3P0DOY3 106 aa17.88■□□□□ 0.45
SMARCC1-203ENST00000454240 HIST1H2BOP23527 126 aa17.88■□□□□ 0.45
SMARCC1-203ENST00000454240 HIST1H2BBP33778 126 aa17.88■□□□□ 0.45
SMARCC1-203ENST00000454240 HIST1H2BDP58876 126 aa17.88■□□□□ 0.45
SMARCC1-203ENST00000454240 HIST1H2BCP62807 126 aa17.88■□□□□ 0.45
SMARCC1-203ENST00000454240 HIST2H2BEQ16778 126 aa17.88■□□□□ 0.45
SMARCC1-203ENST00000454240 HIST2H2BFQ5QNW6 126 aaPredicted RBP17.88■□□□□ 0.45
SMARCC1-203ENST00000454240 CIRBP-AS1Q8TBR5 109 aa17.88■□□□□ 0.45
SMARCC1-203ENST00000454240 HIST1H2BHQ93079 126 aa17.88■□□□□ 0.45
SMARCC1-203ENST00000454240 IFI27L1Q96BM0 104 aa17.88■□□□□ 0.45
SMARCC1-203ENST00000454240 HIST1H2BNQ99877 126 aa17.88■□□□□ 0.45
SMARCC1-203ENST00000454240 HIST1H2BMQ99879 126 aa17.88■□□□□ 0.45
SMARCC1-203ENST00000454240 RNF151Q2KHN1 245 aa17.86■□□□□ 0.45
SMARCC1-203ENST00000454240 MRPL35Q9NZE8 188 aaKnown RBP17.86■□□□□ 0.45
SMARCC1-203ENST00000454240 NDUFA1O15239 70 aa17.85■□□□□ 0.45
SMARCC1-203ENST00000454240 SMR3BP02814 79 aaPredicted RBP17.85■□□□□ 0.45
SMARCC1-203ENST00000454240 CHTF8P0CG12 524 aa17.85■□□□□ 0.45
SMARCC1-203ENST00000454240 PACRGQ96M98 296 aaPredicted RBP17.85■□□□□ 0.45
SMARCC1-203ENST00000454240 PKIGQ9Y2B9 76 aa17.85■□□□□ 0.45
SMARCC1-203ENST00000454240 SMIM1B2RUZ4 78 aa17.83■□□□□ 0.44
SMARCC1-203ENST00000454240 C10orf25Q5T742 122 aa17.83■□□□□ 0.44
SMARCC1-203ENST00000454240 UNQ6190/PRO20217Q6UXQ8 127 aa17.83■□□□□ 0.44
SMARCC1-203ENST00000454240 Q8IZM0 81 aa17.83■□□□□ 0.44
SMARCC1-203ENST00000454240 SPACA4Q8TDM5 124 aa17.83■□□□□ 0.44
SMARCC1-203ENST00000454240 FAT1Q14517 4588 aa17.83■□□□□ 0.44
SMARCC1-203ENST00000454240 TRAV12-1A0A0B4J245 112 aa17.82■□□□□ 0.44
SMARCC1-203ENST00000454240 A0A096LNI7 61 aa17.81■□□□□ 0.44
SMARCC1-203ENST00000454240 LEPROTL1O95214 131 aa17.81■□□□□ 0.44
SMARCC1-203ENST00000454240 TOMM7Q9P0U1 55 aa17.81■□□□□ 0.44
SMARCC1-203ENST00000454240 LOC107984640A0A0U1RRK4 108 aa17.8■□□□□ 0.44
SMARCC1-203ENST00000454240 PRSS2P07478 247 aa17.8■□□□□ 0.44
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