RNA–Protein interactions for RNA: ENST00000453453.1

SNX17-204, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,638 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-204ENST00000453453 TRGV1A0A0A0MS02 117 aa11.3□□□□□ -0.6
SNX17-204ENST00000453453 A0A0J9YXY3 114 aa11.3□□□□□ -0.6
SNX17-204ENST00000453453 NDUFV3P56181 108 aaKnown RBP11.3□□□□□ -0.6
SNX17-204ENST00000453453 UBE2WQ96B02 151 aa11.3□□□□□ -0.6
SNX17-204ENST00000453453 NOP10Q9NPE3 64 aaKnown RBP11.3□□□□□ -0.6
SNX17-204ENST00000453453 IGLV4-3A0A075B6K6 122 aa11.29□□□□□ -0.6
SNX17-204ENST00000453453 TIMM17BO60830 172 aa11.29□□□□□ -0.6
SNX17-204ENST00000453453 NTN5Q8WTR8 489 aaPredicted RBP11.29□□□□□ -0.6
SNX17-204ENST00000453453 OVOL2Q9BRP0 275 aa11.29□□□□□ -0.6
SNX17-204ENST00000453453 A0A087WWL8 130 aa11.28□□□□□ -0.6
SNX17-204ENST00000453453 PLAC8L1A1L4L8 177 aa11.28□□□□□ -0.6
SNX17-204ENST00000453453 COX6CP09669 75 aa11.28□□□□□ -0.6
SNX17-204ENST00000453453 IFITM1P13164 125 aa11.28□□□□□ -0.6
SNX17-204ENST00000453453 MRPS36P82909 103 aaKnown RBP11.28□□□□□ -0.6
SNX17-204ENST00000453453 Q1RN00 199 aa11.28□□□□□ -0.6
SNX17-204ENST00000453453 IGHV4-28A0A0C4DH34 117 aa11.27□□□□□ -0.6
SNX17-204ENST00000453453 NHLRC4P0CG21 123 aaPredicted RBP11.27□□□□□ -0.6
SNX17-204ENST00000453453 ZNF56Q15929 161 aa11.27□□□□□ -0.6
SNX17-204ENST00000453453 MRAPQ8TCY5 172 aa11.27□□□□□ -0.6
SNX17-204ENST00000453453 JPT2Q9H910 190 aa11.27□□□□□ -0.6
SNX17-204ENST00000453453 DNHD1Q96M86 4753 aa11.27□□□□□ -0.61
SNX17-204ENST00000453453 GAGE12JA6NER3 117 aa11.27□□□□□ -0.61
SNX17-204ENST00000453453 GAGE7O76087 117 aa11.27□□□□□ -0.61
SNX17-204ENST00000453453 GAGE12FP0CL80 117 aa11.27□□□□□ -0.61
SNX17-204ENST00000453453 GAGE12GP0CL81 117 aa11.27□□□□□ -0.61
SNX17-204ENST00000453453 GAGE12IP0CL82 117 aa11.27□□□□□ -0.61
SNX17-204ENST00000453453 GAGE4Q13068 117 aa11.27□□□□□ -0.61
SNX17-204ENST00000453453 TTC32Q5I0X7 151 aa11.27□□□□□ -0.61
SNX17-204ENST00000453453 FAM74A4Q5TZK3 123 aa11.27□□□□□ -0.61
SNX17-204ENST00000453453 LITAFQ99732 161 aa11.27□□□□□ -0.61
SNX17-204ENST00000453453 TIMM21Q9BVV7 248 aa11.27□□□□□ -0.61
SNX17-204ENST00000453453 LYRM9A8MSI8 78 aa11.26□□□□□ -0.61
SNX17-204ENST00000453453 MIAQ16674 131 aa11.26□□□□□ -0.61
SNX17-204ENST00000453453 Q6ZTI0 123 aa11.26□□□□□ -0.61
SNX17-204ENST00000453453 Q8NAQ8 132 aa11.26□□□□□ -0.61
SNX17-204ENST00000453453 RETNQ9HD89 108 aa11.26□□□□□ -0.61
SNX17-204ENST00000453453 ICOSQ9Y6W8 199 aa11.26□□□□□ -0.61
SNX17-204ENST00000453453 TRGV2A0A075B6R0 118 aa11.25□□□□□ -0.61
SNX17-204ENST00000453453 IGHV1-58A0A0C4DH39 117 aa11.25□□□□□ -0.61
SNX17-204ENST00000453453 TRIAP1O43715 76 aa11.25□□□□□ -0.61
SNX17-204ENST00000453453 IGHV3-30-3P0DP02 117 aa11.25□□□□□ -0.61
SNX17-204ENST00000453453 A0A0J9YXV3 536 aa11.24□□□□□ -0.61
SNX17-204ENST00000453453 RS1O15537 224 aa11.24□□□□□ -0.61
SNX17-204ENST00000453453 C2orf82Q6UX34 121 aa11.24□□□□□ -0.61
SNX17-204ENST00000453453 TRAV4A0A0B4J268 109 aa11.24□□□□□ -0.61
SNX17-204ENST00000453453 TINCRA0A1B0GVN0 87 aa11.24□□□□□ -0.61
SNX17-204ENST00000453453 LST1O00453 97 aa11.23□□□□□ -0.61
SNX17-204ENST00000453453 C15orf53Q8NAA6 179 aa11.23□□□□□ -0.61
SNX17-204ENST00000453453 DEFB4AO15263 64 aa11.22□□□□□ -0.61
SNX17-204ENST00000453453 ACYP1P07311 99 aa11.22□□□□□ -0.61
SNX17-204ENST00000453453 FAM222AQ5U5X8 452 aa11.22□□□□□ -0.61
SNX17-204ENST00000453453 TM2D3Q9BRN9 247 aa11.22□□□□□ -0.61
SNX17-204ENST00000453453 SPART-AS1P0CW21 52 aa11.21□□□□□ -0.61
SNX17-204ENST00000453453 DEFB130BP0DP73 79 aa11.21□□□□□ -0.61
SNX17-204ENST00000453453 DEFB130AP0DP74 79 aa11.21□□□□□ -0.61
SNX17-204ENST00000453453 TRBV7-7A0A0K0K1E9 115 aa11.2□□□□□ -0.62
SNX17-204ENST00000453453 NACAE9PAV3 2078 aa11.2□□□□□ -0.62
SNX17-204ENST00000453453 H7C2G1 150 aa11.2□□□□□ -0.62
SNX17-204ENST00000453453 H7C423 109 aa11.2□□□□□ -0.62
SNX17-204ENST00000453453 LINC00612Q8N6U2 182 aa11.2□□□□□ -0.62
SNX17-204ENST00000453453 COPS9Q8WXC6 57 aa11.2□□□□□ -0.62
SNX17-204ENST00000453453 VSIG2Q96IQ7 327 aa11.2□□□□□ -0.62
SNX17-204ENST00000453453 C11orf68Q9H3H3 251 aaKnown RBP11.2□□□□□ -0.62
SNX17-204ENST00000453453 NDUFA12Q9UI09 145 aa11.2□□□□□ -0.62
SNX17-204ENST00000453453 NBEAL2Q6ZNJ1 2754 aa11.2□□□□□ -0.62
SNX17-204ENST00000453453 IGHV3-73A0A0B4J1V6 119 aa11.2□□□□□ -0.62
SNX17-204ENST00000453453 DAD1P61803 113 aa11.2□□□□□ -0.62
SNX17-204ENST00000453453 OPRPNQ99935 248 aaPredicted RBP11.2□□□□□ -0.62
SNX17-204ENST00000453453 IMUPQ9GZP8 106 aa11.2□□□□□ -0.62
SNX17-204ENST00000453453 PPDPFQ9H3Y8 114 aa11.2□□□□□ -0.62
SNX17-204ENST00000453453 SS18L2Q9UHA2 77 aa11.2□□□□□ -0.62
SNX17-204ENST00000453453 TEX49A0A1B0GTD5 131 aa11.19□□□□□ -0.62
SNX17-204ENST00000453453 B5MCH6 92 aa11.19□□□□□ -0.62
SNX17-204ENST00000453453 IGHV3-53P01767 116 aa11.19□□□□□ -0.62
SNX17-204ENST00000453453 B9D2Q9BPU9 175 aa11.19□□□□□ -0.62
SNX17-204ENST00000453453 DNAJC30Q96LL9 226 aa11.17□□□□□ -0.62
SNX17-204ENST00000453453 TRGV4A0A0C4DH28 118 aa11.17□□□□□ -0.62
SNX17-204ENST00000453453 TIRAPP58753 221 aa11.17□□□□□ -0.62
SNX17-204ENST00000453453 FAM104AQ969W3 186 aa11.17□□□□□ -0.62
SNX17-204ENST00000453453 IGHV3-64A0A075B6Q5 118 aa11.16□□□□□ -0.62
SNX17-204ENST00000453453 IGLV5-45A0A087WSX0 123 aa11.16□□□□□ -0.62
SNX17-204ENST00000453453 NDUFA1O15239 70 aa11.16□□□□□ -0.62
SNX17-204ENST00000453453 CELA1Q9UNI1 258 aa11.16□□□□□ -0.62
SNX17-204ENST00000453453 A0A0J9YWU9 116 aa11.14□□□□□ -0.63
SNX17-204ENST00000453453 ATP5G1P05496 136 aa11.14□□□□□ -0.63
SNX17-204ENST00000453453 PRSS2P07478 247 aa11.14□□□□□ -0.63
SNX17-204ENST00000453453 TMEM101Q96IK0 257 aa11.14□□□□□ -0.63
SNX17-204ENST00000453453 TMEM126AQ9H061 195 aa11.14□□□□□ -0.63
SNX17-204ENST00000453453 TNFRSF18Q9Y5U5 241 aa11.14□□□□□ -0.63
SNX17-204ENST00000453453 CCDC179H3BU77 68 aa11.13□□□□□ -0.63
SNX17-204ENST00000453453 K7EQD1 137 aa11.13□□□□□ -0.63
SNX17-204ENST00000453453 CIRBPQ14011 172 aaKnown RBP11.13□□□□□ -0.63
SNX17-204ENST00000453453 ADAMTSL4-AS1Q5T5F5 129 aa11.13□□□□□ -0.63
SNX17-204ENST00000453453 Q6ZSN1 163 aa11.13□□□□□ -0.63
SNX17-204ENST00000453453 UBE2D4Q9Y2X8 147 aa11.13□□□□□ -0.63
SNX17-204ENST00000453453 TRBV10-1A0A0K0K1A3 114 aa11.12□□□□□ -0.63
SNX17-204ENST00000453453 TRBV6-4A0A1B0GX49 114 aa11.12□□□□□ -0.63
SNX17-204ENST00000453453 FHL2Q14192 279 aa11.12□□□□□ -0.63
SNX17-204ENST00000453453 FAM19A3Q7Z5A8 133 aa11.12□□□□□ -0.63
SNX17-204ENST00000453453 CHCHD7Q9BUK0 85 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms