RNA–Protein interactions for RNA: ENST00000452322.2

LINC00339-205, long intergenic non-protein coding RNA 339, humanhuman

TSL 3

Gene LINC00339, Length 1,391 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-205ENST00000452322 USP17L23D6RBM5 183 aa7.84□□□□□ -1.16
LINC00339-205ENST00000452322 LECT2O14960 151 aa7.84□□□□□ -1.16
LINC00339-205ENST00000452322 LEPROTL1O95214 131 aa7.84□□□□□ -1.16
LINC00339-205ENST00000452322 LINC00242Q5T6M2 205 aa7.84□□□□□ -1.16
LINC00339-205ENST00000452322 Q8N814 137 aa7.84□□□□□ -1.16
LINC00339-205ENST00000452322 CST9LQ9H4G1 147 aa7.84□□□□□ -1.16
LINC00339-205ENST00000452322 PKHD1P08F94 4074 aa7.83□□□□□ -1.16
LINC00339-205ENST00000452322 IGHV3OR16-9A0A0B4J2B5 98 aa7.83□□□□□ -1.16
LINC00339-205ENST00000452322 COX7A2LO14548 114 aa7.83□□□□□ -1.16
LINC00339-205ENST00000452322 NDUFA6P56556 154 aa7.83□□□□□ -1.16
LINC00339-205ENST00000452322 SEC11AP67812 179 aa7.83□□□□□ -1.16
LINC00339-205ENST00000452322 C14orf177Q52M58 125 aa7.83□□□□□ -1.16
LINC00339-205ENST00000452322 LCE2AQ5TA79 106 aaPredicted RBP7.83□□□□□ -1.16
LINC00339-205ENST00000452322 IFI27L1Q96BM0 104 aa7.83□□□□□ -1.16
LINC00339-205ENST00000452322 HERVK_113P63121 156 aa7.82□□□□□ -1.16
LINC00339-205ENST00000452322 CFAP161Q6P656 301 aa7.82□□□□□ -1.16
LINC00339-205ENST00000452322 HSPB8Q9UJY1 196 aa7.82□□□□□ -1.16
LINC00339-205ENST00000452322 A0A0J9YXV3 536 aa7.81□□□□□ -1.16
LINC00339-205ENST00000452322 COX6A2Q02221 97 aa7.81□□□□□ -1.16
LINC00339-205ENST00000452322 C15orf56Q8N910 161 aa7.81□□□□□ -1.16
LINC00339-205ENST00000452322 PACRGQ96M98 296 aaPredicted RBP7.81□□□□□ -1.16
LINC00339-205ENST00000452322 DYNC1H1Q14204 4646 aaKnown RBP7.8□□□□□ -1.16
LINC00339-205ENST00000452322 A0A087WZ39 114 aa7.8□□□□□ -1.16
LINC00339-205ENST00000452322 TRAV12-1A0A0B4J245 112 aa7.8□□□□□ -1.16
LINC00339-205ENST00000452322 IGHV1-58A0A0C4DH39 117 aa7.8□□□□□ -1.16
LINC00339-205ENST00000452322 TINCRA0A1B0GVN0 87 aa7.8□□□□□ -1.16
LINC00339-205ENST00000452322 PRSS1P07477 247 aa7.8□□□□□ -1.16
LINC00339-205ENST00000452322 FABP4P15090 132 aa7.8□□□□□ -1.16
LINC00339-205ENST00000452322 MALP21145 153 aa7.8□□□□□ -1.16
LINC00339-205ENST00000452322 SPATA12Q7Z6I5 190 aa7.8□□□□□ -1.16
LINC00339-205ENST00000452322 C5orf38Q86SI9 138 aa7.8□□□□□ -1.16
LINC00339-205ENST00000452322 NTN5Q8WTR8 489 aaPredicted RBP7.8□□□□□ -1.16
LINC00339-205ENST00000452322 GEMIN7Q9H840 131 aaKnown RBP7.8□□□□□ -1.16
LINC00339-205ENST00000452322 GVQW2A0A096LPI5 108 aaPredicted RBP7.79□□□□□ -1.16
LINC00339-205ENST00000452322 APOMO95445 188 aa7.79□□□□□ -1.16
LINC00339-205ENST00000452322 KRTAP10-2P60368 255 aa7.79□□□□□ -1.16
LINC00339-205ENST00000452322 CDPF1Q6NVV7 123 aa7.79□□□□□ -1.16
LINC00339-205ENST00000452322 LINC01561Q8N1V8 128 aa7.79□□□□□ -1.16
LINC00339-205ENST00000452322 PGPEP1Q9NXJ5 209 aa7.79□□□□□ -1.16
LINC00339-205ENST00000452322 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.78□□□□□ -1.16
LINC00339-205ENST00000452322 IGLV5-45A0A087WSX0 123 aa7.78□□□□□ -1.16
LINC00339-205ENST00000452322 hDV102S1A0JD36 115 aa7.78□□□□□ -1.16
LINC00339-205ENST00000452322 IGLC3P0DOY3 106 aa7.78□□□□□ -1.16
LINC00339-205ENST00000452322 CHTOPQ9Y3Y2 248 aaKnown RBP7.78□□□□□ -1.16
LINC00339-205ENST00000452322 LRP1BQ9NZR2 4599 aa7.77□□□□□ -1.17
LINC00339-205ENST00000452322 IGLV4-69A0A075B6H9 119 aa7.77□□□□□ -1.17
LINC00339-205ENST00000452322 S100A6P06703 90 aa7.77□□□□□ -1.17
LINC00339-205ENST00000452322 CHAC1Q9BUX1 264 aa7.77□□□□□ -1.17
LINC00339-205ENST00000452322 CDKN2A-AS1Q9UH64 79 aa7.77□□□□□ -1.17
LINC00339-205ENST00000452322 IGHV3-64A0A075B6Q5 118 aa7.76□□□□□ -1.17
LINC00339-205ENST00000452322 IGLV5-52A0A0A0MRZ9 124 aa7.76□□□□□ -1.17
LINC00339-205ENST00000452322 F8VRH5 84 aa7.76□□□□□ -1.17
LINC00339-205ENST00000452322 HIGD2BQ4VC39 106 aa7.76□□□□□ -1.17
LINC00339-205ENST00000452322 LINC00469Q8N7U9 141 aa7.76□□□□□ -1.17
LINC00339-205ENST00000452322 OR10D4PQ8NGN7 298 aa7.76□□□□□ -1.17
LINC00339-205ENST00000452322 MAP1LC3CQ9BXW4 147 aa7.76□□□□□ -1.17
LINC00339-205ENST00000452322 H0Y8G0 127 aa7.75□□□□□ -1.17
LINC00339-205ENST00000452322 ZNF561-AS1K7EIQ3 104 aa7.75□□□□□ -1.17
LINC00339-205ENST00000452322 CNBPP62633 177 aaKnown RBP7.75□□□□□ -1.17
LINC00339-205ENST00000452322 ODF1Q14990 250 aa7.75□□□□□ -1.17
LINC00339-205ENST00000452322 ORAOV1Q8WV07 137 aa7.75□□□□□ -1.17
LINC00339-205ENST00000452322 MRPL35Q9NZE8 188 aaKnown RBP7.75□□□□□ -1.17
LINC00339-205ENST00000452322 C11orf86A6NJI1 115 aa7.74□□□□□ -1.17
LINC00339-205ENST00000452322 H3BRM9 83 aa7.74□□□□□ -1.17
LINC00339-205ENST00000452322 ZNF22P17026 224 aaPredicted RBP7.74□□□□□ -1.17
LINC00339-205ENST00000452322 FUSP35637 526 aaKnown RBP eCLIP7.74□□□□□ -1.17
LINC00339-205ENST00000452322 SPAG11BQ08648 103 aa7.74□□□□□ -1.17
LINC00339-205ENST00000452322 HIST3H2BBQ8N257 126 aa7.74□□□□□ -1.17
LINC00339-205ENST00000452322 BIRC6Q9NR09 4857 aa7.73□□□□□ -1.17
LINC00339-205ENST00000452322 C16orf90A8MZG2 172 aa7.73□□□□□ -1.17
LINC00339-205ENST00000452322 SMIM1B2RUZ4 78 aa7.73□□□□□ -1.17
LINC00339-205ENST00000452322 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.72□□□□□ -1.17
LINC00339-205ENST00000452322 SYS1-DBNDD2H3BUS1 97 aa7.72□□□□□ -1.17
LINC00339-205ENST00000452322 SLPIP03973 132 aa7.72□□□□□ -1.17
LINC00339-205ENST00000452322 S100A2P29034 98 aa7.72□□□□□ -1.17
LINC00339-205ENST00000452322 LINC00526Q96FQ7 95 aa7.72□□□□□ -1.17
LINC00339-205ENST00000452322 C2orf48Q96LS8 159 aa7.72□□□□□ -1.17
LINC00339-205ENST00000452322 DNAH8Q96JB1 4490 aa7.72□□□□□ -1.17
LINC00339-205ENST00000452322 C5orf52A6NGY3 159 aa7.71□□□□□ -1.17
LINC00339-205ENST00000452322 F8WDY8 70 aa7.71□□□□□ -1.17
LINC00339-205ENST00000452322 GCSHP23434 173 aa7.71□□□□□ -1.17
LINC00339-205ENST00000452322 PLNP26678 52 aa7.71□□□□□ -1.17
LINC00339-205ENST00000452322 SNRPEP62304 92 aaKnown RBP7.71□□□□□ -1.17
LINC00339-205ENST00000452322 KIAA0087Q14695 138 aa7.71□□□□□ -1.17
LINC00339-205ENST00000452322 TMEM170BQ5T4T1 132 aa7.71□□□□□ -1.17
LINC00339-205ENST00000452322 PET117Q6UWS5 81 aa7.71□□□□□ -1.17
LINC00339-205ENST00000452322 Q8IZM0 81 aa7.71□□□□□ -1.17
LINC00339-205ENST00000452322 C9orf163Q8N9P6 203 aa7.71□□□□□ -1.17
LINC00339-205ENST00000452322 PRSS2P07478 247 aa7.71□□□□□ -1.18
LINC00339-205ENST00000452322 SPINK8P0C7L1 97 aa7.71□□□□□ -1.18
LINC00339-205ENST00000452322 C3orf79P0CE67 100 aa7.71□□□□□ -1.18
LINC00339-205ENST00000452322 CARD19Q96LW7 228 aa7.71□□□□□ -1.18
LINC00339-205ENST00000452322 CAMK2N2Q96S95 79 aa7.71□□□□□ -1.18
LINC00339-205ENST00000452322 HIST1H2BLQ99880 126 aa7.71□□□□□ -1.18
LINC00339-205ENST00000452322 IGLV5-39A0A0G2JS06 123 aa7.7□□□□□ -1.18
LINC00339-205ENST00000452322 DPM2O94777 84 aa7.7□□□□□ -1.18
LINC00339-205ENST00000452322 KRTDAPP60985 99 aa7.7□□□□□ -1.18
LINC00339-205ENST00000452322 SYCNQ0VAF6 134 aa7.7□□□□□ -1.18
LINC00339-205ENST00000452322 LINC01545Q5VT33 79 aa7.7□□□□□ -1.18
LINC00339-205ENST00000452322 TOMM7Q9P0U1 55 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms