RNA–Protein interactions for RNA: ENST00000449510.6

UBE3B-204, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,771 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-204ENST00000449510 K7EMT4 169 aa9.06□□□□□ -0.96
UBE3B-204ENST00000449510 DEFB4AO15263 64 aa9.06□□□□□ -0.96
UBE3B-204ENST00000449510 MRPS36P82909 103 aaKnown RBP9.05□□□□□ -0.96
UBE3B-204ENST00000449510 C9orf85Q96MD7 179 aa9.05□□□□□ -0.96
UBE3B-204ENST00000449510 ORMDL1Q9P0S3 153 aa9.05□□□□□ -0.96
UBE3B-204ENST00000449510 H3BUA1 57 aa9.04□□□□□ -0.96
UBE3B-204ENST00000449510 RBMY1FQ15415 496 aaKnown RBP9.04□□□□□ -0.96
UBE3B-204ENST00000449510 DNAJC30Q96LL9 226 aa9.04□□□□□ -0.96
UBE3B-204ENST00000449510 SVEP1Q4LDE5 3571 aa9.04□□□□□ -0.96
UBE3B-204ENST00000449510 PF4P02776 101 aa9.04□□□□□ -0.96
UBE3B-204ENST00000449510 ANGP03950 147 aaKnown RBP9.04□□□□□ -0.96
UBE3B-204ENST00000449510 DAD1P61803 113 aa9.04□□□□□ -0.96
UBE3B-204ENST00000449510 SS18Q15532 418 aa9.04□□□□□ -0.96
UBE3B-204ENST00000449510 C10orf105Q8TEF2 133 aa9.04□□□□□ -0.96
UBE3B-204ENST00000449510 GHRHP01286 108 aa9.03□□□□□ -0.96
UBE3B-204ENST00000449510 PRR3P79522 188 aaKnown RBP9.03□□□□□ -0.96
UBE3B-204ENST00000449510 SCXQ7RTU7 201 aa9.03□□□□□ -0.96
UBE3B-204ENST00000449510 LINC01356Q8N9X3 169 aa9.03□□□□□ -0.96
UBE3B-204ENST00000449510 K7EQD1 137 aa9.02□□□□□ -0.96
UBE3B-204ENST00000449510 RBM3P98179 157 aaKnown RBP9.02□□□□□ -0.96
UBE3B-204ENST00000449510 LINC00526Q96FQ7 95 aa9.02□□□□□ -0.96
UBE3B-204ENST00000449510 FASNP49327 2511 aaKnown RBP9.02□□□□□ -0.96
UBE3B-204ENST00000449510 NDUFA1O15239 70 aa9.02□□□□□ -0.97
UBE3B-204ENST00000449510 FBXL19-AS1Q494R0 122 aa9.02□□□□□ -0.97
UBE3B-204ENST00000449510 LINC00242Q5T6M2 205 aa9.02□□□□□ -0.97
UBE3B-204ENST00000449510 ENHOQ6UWT2 76 aa9.02□□□□□ -0.97
UBE3B-204ENST00000449510 C1orf43Q9BWL3 253 aa9.02□□□□□ -0.97
UBE3B-204ENST00000449510 WFDC10AQ9H1F0 79 aa9.02□□□□□ -0.97
UBE3B-204ENST00000449510 TRAV25A0A0B4J276 109 aa9.01□□□□□ -0.97
UBE3B-204ENST00000449510 OVOL2Q9BRP0 275 aa9.01□□□□□ -0.97
UBE3B-204ENST00000449510 SPANXDQ9BXN6 97 aa9.01□□□□□ -0.97
UBE3B-204ENST00000449510 SPANXCQ9NY87 97 aa9.01□□□□□ -0.97
UBE3B-204ENST00000449510 SMIM11BQ8TCY0 68 aa9□□□□□ -0.97
UBE3B-204ENST00000449510 MAP6D1Q9H9H5 199 aa9□□□□□ -0.97
UBE3B-204ENST00000449510 VPREB3Q9UKI3 123 aa9□□□□□ -0.97
UBE3B-204ENST00000449510 PLA2G2AP14555 144 aa9□□□□□ -0.97
UBE3B-204ENST00000449510 PYGO1Q9Y3Y4 419 aa9□□□□□ -0.97
UBE3B-204ENST00000449510 SPENQ96T58 3664 aaKnown RBP8.99□□□□□ -0.97
UBE3B-204ENST00000449510 USP17L23D6RBM5 183 aa8.99□□□□□ -0.97
UBE3B-204ENST00000449510 CXCL5P42830 114 aa8.99□□□□□ -0.97
UBE3B-204ENST00000449510 CHCHD7Q9BUK0 85 aa8.99□□□□□ -0.97
UBE3B-204ENST00000449510 A0A087WYN8 130 aa8.98□□□□□ -0.97
UBE3B-204ENST00000449510 H0YGX0 51 aa8.98□□□□□ -0.97
UBE3B-204ENST00000449510 HRCT1Q6UXD1 115 aa8.98□□□□□ -0.97
UBE3B-204ENST00000449510 FAM19A5Q7Z5A7 132 aaPredicted RBP8.98□□□□□ -0.97
UBE3B-204ENST00000449510 AMELXQ99217 191 aa8.98□□□□□ -0.97
UBE3B-204ENST00000449510 GYPEP15421 78 aa8.98□□□□□ -0.97
UBE3B-204ENST00000449510 COX7CP15954 63 aa8.98□□□□□ -0.97
UBE3B-204ENST00000449510 Q6Q795 121 aa8.98□□□□□ -0.97
UBE3B-204ENST00000449510 MRAPQ8TCY5 172 aa8.98□□□□□ -0.97
UBE3B-204ENST00000449510 NBL1P41271 181 aa8.98□□□□□ -0.97
UBE3B-204ENST00000449510 FAM110AQ9BQ89 295 aa8.97□□□□□ -0.97
UBE3B-204ENST00000449510 IGHV4-28A0A0C4DH34 117 aa8.97□□□□□ -0.97
UBE3B-204ENST00000449510 PSMB8P28062 276 aa8.97□□□□□ -0.97
UBE3B-204ENST00000449510 SBSPONQ8IVN8 264 aa8.97□□□□□ -0.97
UBE3B-204ENST00000449510 CITED2Q99967 270 aaPredicted RBP8.97□□□□□ -0.97
UBE3B-204ENST00000449510 SNURFQ9Y675 71 aa8.97□□□□□ -0.97
UBE3B-204ENST00000449510 GCN1Q92616 2671 aaKnown RBP8.97□□□□□ -0.97
UBE3B-204ENST00000449510 SMIM1B2RUZ4 78 aa8.96□□□□□ -0.97
UBE3B-204ENST00000449510 DEFB105AQ8NG35 78 aa8.96□□□□□ -0.97
UBE3B-204ENST00000449510 FAM218AQ96MZ4 157 aa8.96□□□□□ -0.97
UBE3B-204ENST00000449510 F5H768 121 aa8.96□□□□□ -0.98
UBE3B-204ENST00000449510 CCL24O00175 119 aa8.95□□□□□ -0.98
UBE3B-204ENST00000449510 HILS1P60008 231 aa8.95□□□□□ -0.98
UBE3B-204ENST00000449510 SOSTDC1Q6X4U4 206 aa8.95□□□□□ -0.98
UBE3B-204ENST00000449510 LINC00269Q8N2A0 174 aa8.95□□□□□ -0.98
UBE3B-204ENST00000449510 CCL18P55774 89 aa8.95□□□□□ -0.98
UBE3B-204ENST00000449510 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.95□□□□□ -0.98
UBE3B-204ENST00000449510 LINC00846Q9NV44 126 aa8.95□□□□□ -0.98
UBE3B-204ENST00000449510 RPL18AQ02543 176 aaKnown RBP8.94□□□□□ -0.98
UBE3B-204ENST00000449510 IGLV1-40P01703 118 aa8.94□□□□□ -0.98
UBE3B-204ENST00000449510 KIR2DL5BQ8NHK3 375 aa8.94□□□□□ -0.98
UBE3B-204ENST00000449510 Q96MF0 132 aa8.94□□□□□ -0.98
UBE3B-204ENST00000449510 PKIGQ9Y2B9 76 aa8.94□□□□□ -0.98
UBE3B-204ENST00000449510 A8MTW9 85 aa8.93□□□□□ -0.98
UBE3B-204ENST00000449510 UPK3BQ9BT76 320 aa8.93□□□□□ -0.98
UBE3B-204ENST00000449510 C6orf99Q4VX62 202 aa8.93□□□□□ -0.98
UBE3B-204ENST00000449510 LINC00337Q8N6G1 96 aa8.93□□□□□ -0.98
UBE3B-204ENST00000449510 FAM240AA0A1B0GVK7 77 aa8.92□□□□□ -0.98
UBE3B-204ENST00000449510 FAM19A1Q7Z5A9 133 aa8.92□□□□□ -0.98
UBE3B-204ENST00000449510 ZANQ9Y493 2812 aa8.92□□□□□ -0.98
UBE3B-204ENST00000449510 A0A0U1RQV1 116 aa8.92□□□□□ -0.98
UBE3B-204ENST00000449510 C9orf116Q5BN46 136 aaPredicted RBP8.92□□□□□ -0.98
UBE3B-204ENST00000449510 SMCR5Q8TEV8 140 aa8.92□□□□□ -0.98
UBE3B-204ENST00000449510 IMUPQ9GZP8 106 aa8.92□□□□□ -0.98
UBE3B-204ENST00000449510 COL27A1Q8IZC6 1860 aaPredicted RBP8.91□□□□□ -0.98
UBE3B-204ENST00000449510 DEFB114Q30KQ6 69 aa8.91□□□□□ -0.98
UBE3B-204ENST00000449510 SERP2Q8N6R1 65 aa8.91□□□□□ -0.98
UBE3B-204ENST00000449510 XAGE1AQ9HD64 81 aa8.91□□□□□ -0.98
UBE3B-204ENST00000449510 FLNCQ14315 2725 aa8.91□□□□□ -0.98
UBE3B-204ENST00000449510 IGLV4-60A0A075B6I1 120 aa8.91□□□□□ -0.98
UBE3B-204ENST00000449510 CDC42SE2Q9NRR3 84 aa8.91□□□□□ -0.98
UBE3B-204ENST00000449510 MPLKIPQ8TAP9 179 aa8.91□□□□□ -0.98
UBE3B-204ENST00000449510 LITAFQ99732 161 aa8.91□□□□□ -0.98
UBE3B-204ENST00000449510 SMIM9A6NGZ8 99 aa8.9□□□□□ -0.98
UBE3B-204ENST00000449510 C5orf47Q569G3 176 aa8.9□□□□□ -0.98
UBE3B-204ENST00000449510 TIMM17BO60830 172 aa8.89□□□□□ -0.99
UBE3B-204ENST00000449510 LRRC75A-AS1Q8N1F1 130 aa8.89□□□□□ -0.99
UBE3B-204ENST00000449510 CSDC2Q9Y534 153 aaKnown RBP8.89□□□□□ -0.99
UBE3B-204ENST00000449510 TMEM89A2RUT3 159 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms