RNA–Protein interactions for RNA: ENST00000448539.1

GTF3C3-206, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 796 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-206ENST00000448539 LINC00614P0C842 121 aa9.13□□□□□ -0.95
GTF3C3-206ENST00000448539 LINC01620Q4KN68 170 aa9.13□□□□□ -0.95
GTF3C3-206ENST00000448539 TIMM17AQ99595 171 aa9.13□□□□□ -0.95
GTF3C3-206ENST00000448539 APOBP04114 4563 aaKnown RBP9.13□□□□□ -0.95
GTF3C3-206ENST00000448539 APOMO95445 188 aa9.12□□□□□ -0.95
GTF3C3-206ENST00000448539 ERASQ7Z444 233 aa9.12□□□□□ -0.95
GTF3C3-206ENST00000448539 C5orf38Q86SI9 138 aa9.12□□□□□ -0.95
GTF3C3-206ENST00000448539 GVQW2A0A096LPI5 108 aaPredicted RBP9.11□□□□□ -0.95
GTF3C3-206ENST00000448539 ZNF561-AS1K7EIQ3 104 aa9.11□□□□□ -0.95
GTF3C3-206ENST00000448539 CNBPP62633 177 aaKnown RBP9.11□□□□□ -0.95
GTF3C3-206ENST00000448539 C9orf163Q8N9P6 203 aa9.1□□□□□ -0.95
GTF3C3-206ENST00000448539 AMELXQ99217 191 aa9.1□□□□□ -0.95
GTF3C3-206ENST00000448539 TRGC2P03986 189 aa9.09□□□□□ -0.95
GTF3C3-206ENST00000448539 UBE2D1P51668 147 aa9.09□□□□□ -0.95
GTF3C3-206ENST00000448539 ZC2HC1BQ5TFG8 222 aa9.09□□□□□ -0.95
GTF3C3-206ENST00000448539 IGHV3-64A0A075B6Q5 118 aa9.08□□□□□ -0.96
GTF3C3-206ENST00000448539 IGHV3OR16-9A0A0B4J2B5 98 aa9.08□□□□□ -0.96
GTF3C3-206ENST00000448539 COLCA2A8K830 154 aa9.08□□□□□ -0.96
GTF3C3-206ENST00000448539 HBDP02042 147 aa9.08□□□□□ -0.96
GTF3C3-206ENST00000448539 SEC11AP67812 179 aa9.08□□□□□ -0.96
GTF3C3-206ENST00000448539 LINC00242Q5T6M2 205 aa9.08□□□□□ -0.96
GTF3C3-206ENST00000448539 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.07□□□□□ -0.96
GTF3C3-206ENST00000448539 SLPIP03973 132 aa9.07□□□□□ -0.96
GTF3C3-206ENST00000448539 LINC00173Q6ZV60 143 aa9.07□□□□□ -0.96
GTF3C3-206ENST00000448539 BAGE3Q86Y29 109 aa9.07□□□□□ -0.96
GTF3C3-206ENST00000448539 CHCHD1Q96BP2 118 aaKnown RBP9.07□□□□□ -0.96
GTF3C3-206ENST00000448539 URB1-AS1Q96HZ7 61 aa9.07□□□□□ -0.96
GTF3C3-206ENST00000448539 FAM30AQ9NZY2 134 aa9.07□□□□□ -0.96
GTF3C3-206ENST00000448539 SCO1O75880 301 aa9.06□□□□□ -0.96
GTF3C3-206ENST00000448539 XGP55808 180 aa9.06□□□□□ -0.96
GTF3C3-206ENST00000448539 PMCHL1Q16048 86 aa9.06□□□□□ -0.96
GTF3C3-206ENST00000448539 LINC00528Q8N1L1 170 aa9.06□□□□□ -0.96
GTF3C3-206ENST00000448539 OR10D4PQ8NGN7 298 aa9.06□□□□□ -0.96
GTF3C3-206ENST00000448539 ORAOV1Q8WV07 137 aa9.06□□□□□ -0.96
GTF3C3-206ENST00000448539 LINC00526Q96FQ7 95 aa9.06□□□□□ -0.96
GTF3C3-206ENST00000448539 GEMIN7Q9H840 131 aaKnown RBP9.06□□□□□ -0.96
GTF3C3-206ENST00000448539 IGLV4-69A0A075B6H9 119 aa9.05□□□□□ -0.96
GTF3C3-206ENST00000448539 A0A087WZ39 114 aa9.05□□□□□ -0.96
GTF3C3-206ENST00000448539 HERVK_113P63121 156 aa9.05□□□□□ -0.96
GTF3C3-206ENST00000448539 HAMPP81172 84 aa9.05□□□□□ -0.96
GTF3C3-206ENST00000448539 COX6A2Q02221 97 aa9.05□□□□□ -0.96
GTF3C3-206ENST00000448539 SPAG11BQ08648 103 aa9.05□□□□□ -0.96
GTF3C3-206ENST00000448539 Q6ZSA8 131 aa9.05□□□□□ -0.96
GTF3C3-206ENST00000448539 CARD19Q96LW7 228 aa9.05□□□□□ -0.96
GTF3C3-206ENST00000448539 ATP5LO75964 103 aa9.04□□□□□ -0.96
GTF3C3-206ENST00000448539 NDUFA6P56556 154 aa9.04□□□□□ -0.96
GTF3C3-206ENST00000448539 SYCNQ0VAF6 134 aa9.04□□□□□ -0.96
GTF3C3-206ENST00000448539 PMVKQ15126 192 aa9.04□□□□□ -0.96
GTF3C3-206ENST00000448539 SDIM1Q6ZPB5 146 aa9.04□□□□□ -0.96
GTF3C3-206ENST00000448539 CAMK2N2Q96S95 79 aa9.04□□□□□ -0.96
GTF3C3-206ENST00000448539 PKIGQ9Y2B9 76 aa9.04□□□□□ -0.96
GTF3C3-206ENST00000448539 A0A096LNJ9 63 aa9.03□□□□□ -0.96
GTF3C3-206ENST00000448539 A0A0J9YXV3 536 aa9.03□□□□□ -0.96
GTF3C3-206ENST00000448539 HSBP1O75506 76 aa9.03□□□□□ -0.96
GTF3C3-206ENST00000448539 FAM19A3Q7Z5A8 133 aa9.03□□□□□ -0.96
GTF3C3-206ENST00000448539 DPH3Q96FX2 82 aa9.03□□□□□ -0.96
GTF3C3-206ENST00000448539 C2orf48Q96LS8 159 aa9.03□□□□□ -0.96
GTF3C3-206ENST00000448539 CST9LQ9H4G1 147 aa9.03□□□□□ -0.96
GTF3C3-206ENST00000448539 LINC01561Q8N1V8 128 aa9.02□□□□□ -0.97
GTF3C3-206ENST00000448539 PACRGQ96M98 296 aaPredicted RBP9.02□□□□□ -0.97
GTF3C3-206ENST00000448539 CHAC1Q9BUX1 264 aa9.02□□□□□ -0.97
GTF3C3-206ENST00000448539 TINCRA0A1B0GVN0 87 aa9.01□□□□□ -0.97
GTF3C3-206ENST00000448539 F8WDY8 70 aa9.01□□□□□ -0.97
GTF3C3-206ENST00000448539 S100A1P23297 94 aa9.01□□□□□ -0.97
GTF3C3-206ENST00000448539 PDZD11Q5EBL8 140 aa9.01□□□□□ -0.97
GTF3C3-206ENST00000448539 Q6ZRU5 148 aa9.01□□□□□ -0.97
GTF3C3-206ENST00000448539 Q8N1X5 172 aa9.01□□□□□ -0.97
GTF3C3-206ENST00000448539 LINC00469Q8N7U9 141 aa9.01□□□□□ -0.97
GTF3C3-206ENST00000448539 NDUFA1O15239 70 aa9□□□□□ -0.97
GTF3C3-206ENST00000448539 PRSS2P07478 247 aa9□□□□□ -0.97
GTF3C3-206ENST00000448539 SCXQ7RTU7 201 aa9□□□□□ -0.97
GTF3C3-206ENST00000448539 CDKN2A-AS1Q9UH64 79 aa9□□□□□ -0.97
GTF3C3-206ENST00000448539 SMR3BP02814 79 aaPredicted RBP8.99□□□□□ -0.97
GTF3C3-206ENST00000448539 CIRBP-AS1Q8TBR5 109 aa8.99□□□□□ -0.97
GTF3C3-206ENST00000448539 TOMM7Q9P0U1 55 aa8.99□□□□□ -0.97
GTF3C3-206ENST00000448539 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.99□□□□□ -0.97
GTF3C3-206ENST00000448539 IGKV2-24A0A0C4DH68 120 aa8.98□□□□□ -0.97
GTF3C3-206ENST00000448539 FAM229AH3BQW9 127 aa8.98□□□□□ -0.97
GTF3C3-206ENST00000448539 SERF1AO75920 110 aa8.98□□□□□ -0.97
GTF3C3-206ENST00000448539 FAM19A2Q8N3H0 131 aa8.98□□□□□ -0.97
GTF3C3-206ENST00000448539 IFI27L1Q96BM0 104 aa8.98□□□□□ -0.97
GTF3C3-206ENST00000448539 LINC00474Q9P2X8 69 aa8.98□□□□□ -0.97
GTF3C3-206ENST00000448539 LOC107984640A0A0U1RRK4 108 aa8.97□□□□□ -0.97
GTF3C3-206ENST00000448539 EPM2AB3EWF7 344 aa8.97□□□□□ -0.97
GTF3C3-206ENST00000448539 H3BRM9 83 aa8.97□□□□□ -0.97
GTF3C3-206ENST00000448539 C6orf226Q5I0X4 101 aa8.97□□□□□ -0.97
GTF3C3-206ENST00000448539 MRPL35Q9NZE8 188 aaKnown RBP8.97□□□□□ -0.97
GTF3C3-206ENST00000448539 DNAH8Q96JB1 4490 aa8.97□□□□□ -0.97
GTF3C3-206ENST00000448539 ATP6V1G1O75348 118 aa8.96□□□□□ -0.98
GTF3C3-206ENST00000448539 CHTF8P0CG12 524 aa8.96□□□□□ -0.98
GTF3C3-206ENST00000448539 CKS1BP61024 79 aa8.96□□□□□ -0.98
GTF3C3-206ENST00000448539 KIAA0087Q14695 138 aa8.96□□□□□ -0.98
GTF3C3-206ENST00000448539 RNF151Q2KHN1 245 aa8.96□□□□□ -0.98
GTF3C3-206ENST00000448539 MAJINQ3KP22 176 aa8.96□□□□□ -0.98
GTF3C3-206ENST00000448539 IGLV5-45A0A087WSX0 123 aa8.95□□□□□ -0.98
GTF3C3-206ENST00000448539 PANO1I0J062 215 aa8.95□□□□□ -0.98
GTF3C3-206ENST00000448539 LEPROTL1O95214 131 aa8.95□□□□□ -0.98
GTF3C3-206ENST00000448539 IGLC3P0DOY3 106 aa8.95□□□□□ -0.98
GTF3C3-206ENST00000448539 CIRBPQ14011 172 aaKnown RBP8.95□□□□□ -0.98
GTF3C3-206ENST00000448539 UNQ6190/PRO20217Q6UXQ8 127 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms