RNA–Protein interactions for RNA: ENST00000448238.2

NIPBL-202, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 1 (best) BASIC

Gene NIPBL, Length 8,729 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-202ENST00000448238 XGP55808 180 aa6.71□□□□□ -1.33
NIPBL-202ENST00000448238 FAM167A-AS1Q96KT0 104 aa6.71□□□□□ -1.33
NIPBL-202ENST00000448238 RPS28P62857 69 aaKnown RBP6.71□□□□□ -1.34
NIPBL-202ENST00000448238 COL24A1Q17RW2 1714 aa6.71□□□□□ -1.34
NIPBL-202ENST00000448238 PRSS33Q8NF86 280 aa6.71□□□□□ -1.34
NIPBL-202ENST00000448238 TRBV6-4A0A1B0GX49 114 aa6.71□□□□□ -1.34
NIPBL-202ENST00000448238 IGLV1-44P01699 117 aa6.71□□□□□ -1.34
NIPBL-202ENST00000448238 ZNF22P17026 224 aaPredicted RBP6.71□□□□□ -1.34
NIPBL-202ENST00000448238 JMJD1CQ15652 2540 aa6.71□□□□□ -1.34
NIPBL-202ENST00000448238 SIGLEC1Q9BZZ2 1709 aa6.71□□□□□ -1.34
NIPBL-202ENST00000448238 SPTBN4Q9H254 2564 aa6.71□□□□□ -1.34
NIPBL-202ENST00000448238 LY6G6EA0A0G2JKS1 128 aa6.71□□□□□ -1.34
NIPBL-202ENST00000448238 HCG22E2RYF7 251 aa6.71□□□□□ -1.34
NIPBL-202ENST00000448238 PCOTHQ58A44 107 aa6.71□□□□□ -1.34
NIPBL-202ENST00000448238 B3GALT5-AS1P59052 145 aa6.7□□□□□ -1.34
NIPBL-202ENST00000448238 ZNF581Q9P0T4 197 aa6.7□□□□□ -1.34
NIPBL-202ENST00000448238 C11orf53Q8IXP5 236 aa6.7□□□□□ -1.34
NIPBL-202ENST00000448238 Q6ZTC4 211 aa6.7□□□□□ -1.34
NIPBL-202ENST00000448238 BRWD3Q6RI45 1802 aa6.7□□□□□ -1.34
NIPBL-202ENST00000448238 KIAA1549LQ6ZVL6 1849 aa6.7□□□□□ -1.34
NIPBL-202ENST00000448238 IGFL3Q6UXB1 125 aa6.7□□□□□ -1.34
NIPBL-202ENST00000448238 SSBP3-AS1Q7Z2R9 100 aa6.7□□□□□ -1.34
NIPBL-202ENST00000448238 DEFB4AO15263 64 aa6.69□□□□□ -1.34
NIPBL-202ENST00000448238 DEFB113Q30KQ7 82 aa6.69□□□□□ -1.34
NIPBL-202ENST00000448238 Q6ZSR3 168 aa6.69□□□□□ -1.34
NIPBL-202ENST00000448238 C1orf64Q8NEQ6 169 aa6.69□□□□□ -1.34
NIPBL-202ENST00000448238 CEMP1Q6PRD7 247 aaPredicted RBP6.69□□□□□ -1.34
NIPBL-202ENST00000448238 C17orf82Q86X59 251 aaPredicted RBP6.69□□□□□ -1.34
NIPBL-202ENST00000448238 LINC01554Q52M75 96 aa6.68□□□□□ -1.34
NIPBL-202ENST00000448238 Q8N814 137 aa6.68□□□□□ -1.34
NIPBL-202ENST00000448238 REG3GQ6UW15 175 aa6.68□□□□□ -1.34
NIPBL-202ENST00000448238 EPG5Q9HCE0 2579 aa6.68□□□□□ -1.34
NIPBL-202ENST00000448238 Q6ZR03 302 aa6.68□□□□□ -1.34
NIPBL-202ENST00000448238 Q8IZM0 81 aa6.68□□□□□ -1.34
NIPBL-202ENST00000448238 MAP6D1Q9H9H5 199 aa6.68□□□□□ -1.34
NIPBL-202ENST00000448238 LINC00575Q6W349 94 aa6.67□□□□□ -1.34
NIPBL-202ENST00000448238 FLVCR1-AS1Q8TAF5 88 aa6.67□□□□□ -1.34
NIPBL-202ENST00000448238 H3BPC8 53 aa6.66□□□□□ -1.34
NIPBL-202ENST00000448238 LELP1Q5T871 98 aa6.66□□□□□ -1.34
NIPBL-202ENST00000448238 F8WDY8 70 aa6.66□□□□□ -1.34
NIPBL-202ENST00000448238 KIAA1671Q9BY89 1806 aa6.66□□□□□ -1.34
NIPBL-202ENST00000448238 LINC00337Q8N6G1 96 aa6.66□□□□□ -1.34
NIPBL-202ENST00000448238 SBSPONQ8IVN8 264 aa6.66□□□□□ -1.34
NIPBL-202ENST00000448238 RPL37AP8A6NKH3 93 aa6.65□□□□□ -1.34
NIPBL-202ENST00000448238 COL5A1P20908 1838 aaPredicted RBP6.65□□□□□ -1.34
NIPBL-202ENST00000448238 Q6ZTI0 123 aa6.65□□□□□ -1.34
NIPBL-202ENST00000448238 C6orf48Q9UBA6 75 aa6.65□□□□□ -1.34
NIPBL-202ENST00000448238 BCE1O60756 84 aa6.65□□□□□ -1.35
NIPBL-202ENST00000448238 IGKV2D-30A0A075B6S6 120 aa6.65□□□□□ -1.35
NIPBL-202ENST00000448238 TNFRSF13BO14836 293 aaPredicted RBP6.65□□□□□ -1.35
NIPBL-202ENST00000448238 IGKV2-30P06310 120 aa6.65□□□□□ -1.35
NIPBL-202ENST00000448238 DAZAP2Q15038 168 aaPredicted RBP6.65□□□□□ -1.35
NIPBL-202ENST00000448238 PRAC2D3DTV9 90 aa6.64□□□□□ -1.35
NIPBL-202ENST00000448238 M0QY20 66 aa6.64□□□□□ -1.35
NIPBL-202ENST00000448238 C1orf147Q96MC9 270 aaPredicted RBP6.64□□□□□ -1.35
NIPBL-202ENST00000448238 A0A1B0GW54 56 aa6.64□□□□□ -1.35
NIPBL-202ENST00000448238 MSMPQ1L6U9 139 aa6.64□□□□□ -1.35
NIPBL-202ENST00000448238 MRGPRG-AS1Q2M3A8 158 aa6.63□□□□□ -1.35
NIPBL-202ENST00000448238 CYP4F30PQ9H0H9 118 aa6.63□□□□□ -1.35
NIPBL-202ENST00000448238 A0A087WVE0 104 aa6.62□□□□□ -1.35
NIPBL-202ENST00000448238 CD164Q04900 197 aa6.62□□□□□ -1.35
NIPBL-202ENST00000448238 MDFIQ99750 246 aa6.62□□□□□ -1.35
NIPBL-202ENST00000448238 NUPR2A6NF83 97 aa6.62□□□□□ -1.35
NIPBL-202ENST00000448238 EGFEM1PQ0D2K5 195 aa6.62□□□□□ -1.35
NIPBL-202ENST00000448238 U3KQK5 164 aa6.62□□□□□ -1.35
NIPBL-202ENST00000448238 Q9BRP9 147 aa6.61□□□□□ -1.35
NIPBL-202ENST00000448238 TMEM105Q8N8V8 129 aa6.61□□□□□ -1.35
NIPBL-202ENST00000448238 KPRPQ5T749 579 aaPredicted RBP6.61□□□□□ -1.35
NIPBL-202ENST00000448238 MAPKAPK5-AS1Q8N8E1 139 aa6.6□□□□□ -1.35
NIPBL-202ENST00000448238 C2orf48Q96LS8 159 aa6.6□□□□□ -1.35
NIPBL-202ENST00000448238 USP24Q9UPU5 2620 aa6.6□□□□□ -1.35
NIPBL-202ENST00000448238 CHCHD7Q9BUK0 85 aa6.6□□□□□ -1.35
NIPBL-202ENST00000448238 UQCR11O14957 56 aa6.6□□□□□ -1.35
NIPBL-202ENST00000448238 ZNF80P51504 273 aaPredicted RBP6.6□□□□□ -1.35
NIPBL-202ENST00000448238 ZFHX2Q9C0A1 2572 aaPredicted RBP6.59□□□□□ -1.35
NIPBL-202ENST00000448238 IGLV3-1P01715 115 aa6.59□□□□□ -1.35
NIPBL-202ENST00000448238 LINC00959A0A1B0GUT2 108 aa6.59□□□□□ -1.35
NIPBL-202ENST00000448238 ERC2-IT1O76042 136 aa6.58□□□□□ -1.36
NIPBL-202ENST00000448238 A0A087WSZ3 146 aa6.58□□□□□ -1.36
NIPBL-202ENST00000448238 CR1P17927 2039 aa6.58□□□□□ -1.36
NIPBL-202ENST00000448238 SIP14410 1827 aa6.58□□□□□ -1.36
NIPBL-202ENST00000448238 IGF2-ASQ6U949 168 aa6.58□□□□□ -1.36
NIPBL-202ENST00000448238 K7EQG2 157 aa6.57□□□□□ -1.36
NIPBL-202ENST00000448238 MBD6Q96DN6 1003 aa6.57□□□□□ -1.36
NIPBL-202ENST00000448238 TRAV22A0A0B4J277 110 aa6.57□□□□□ -1.36
NIPBL-202ENST00000448238 C2orf91Q6ZV80 131 aa6.57□□□□□ -1.36
NIPBL-202ENST00000448238 CYSRT1A8MQ03 144 aa6.57□□□□□ -1.36
NIPBL-202ENST00000448238 Q8N2B8 174 aa6.57□□□□□ -1.36
NIPBL-202ENST00000448238 ODF3BA8MYP8 253 aa6.57□□□□□ -1.36
NIPBL-202ENST00000448238 UNQ9165/PRO28630Q6UXU0 137 aa6.56□□□□□ -1.36
NIPBL-202ENST00000448238 CRIP2P52943 208 aaPredicted RBP6.56□□□□□ -1.36
NIPBL-202ENST00000448238 CSNK1G2-AS1Q8NCQ2 148 aa6.56□□□□□ -1.36
NIPBL-202ENST00000448238 FASNP49327 2511 aaKnown RBP6.56□□□□□ -1.36
NIPBL-202ENST00000448238 EDN2P20800 178 aa6.56□□□□□ -1.36
NIPBL-202ENST00000448238 TNS1Q9HBL0 1735 aaKnown RBP6.56□□□□□ -1.36
NIPBL-202ENST00000448238 DEFB114Q30KQ6 69 aa6.56□□□□□ -1.36
NIPBL-202ENST00000448238 E7EUB6 86 aa6.56□□□□□ -1.36
NIPBL-202ENST00000448238 SHISA2Q6UWI4 295 aa6.55□□□□□ -1.36
NIPBL-202ENST00000448238 USP9YO00507 2555 aaPredicted RBP6.55□□□□□ -1.36
NIPBL-202ENST00000448238 TP53TG3Q9ULZ0 132 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms