RNA–Protein interactions for RNA: ENST00000448078.1

USP49-205, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 3

Gene USP49, Length 480 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-205ENST00000448078 A0A1B0GVG6 124 aa3.41□□□□□ -1.86
USP49-205ENST00000448078 C19orf71A6NCJ1 209 aa3.41□□□□□ -1.86
USP49-205ENST00000448078 C1orf196B1AJZ1 125 aa3.41□□□□□ -1.86
USP49-205ENST00000448078 F2Z2F3 143 aa3.41□□□□□ -1.86
USP49-205ENST00000448078 COX7A2LO14548 114 aa3.41□□□□□ -1.86
USP49-205ENST00000448078 LYRM1O43325 122 aa3.41□□□□□ -1.86
USP49-205ENST00000448078 APCSP02743 223 aa3.41□□□□□ -1.86
USP49-205ENST00000448078 UBE2G2P60604 165 aa3.41□□□□□ -1.86
USP49-205ENST00000448078 RPS20P60866 119 aaKnown RBP3.41□□□□□ -1.86
USP49-205ENST00000448078 CTAG1AP78358 180 aa3.41□□□□□ -1.86
USP49-205ENST00000448078 TPRXLQ17RH7 258 aa3.41□□□□□ -1.86
USP49-205ENST00000448078 TMEM241Q24JQ0 296 aa3.41□□□□□ -1.86
USP49-205ENST00000448078 TEX261Q6UWH6 196 aa3.41□□□□□ -1.86
USP49-205ENST00000448078 LINC00526Q96FQ7 95 aa3.41□□□□□ -1.86
USP49-205ENST00000448078 LINC00167Q96N53 147 aa3.41□□□□□ -1.86
USP49-205ENST00000448078 TPPP3Q9BW30 176 aa3.41□□□□□ -1.86
USP49-205ENST00000448078 MUC21A0A140T8X8 626 aa3.4□□□□□ -1.87
USP49-205ENST00000448078 LINC00959A0A1B0GUT2 108 aa3.4□□□□□ -1.87
USP49-205ENST00000448078 SNAI2O43623 268 aa3.4□□□□□ -1.87
USP49-205ENST00000448078 LTAP01374 205 aa3.4□□□□□ -1.87
USP49-205ENST00000448078 BCL2P10415 239 aa3.4□□□□□ -1.87
USP49-205ENST00000448078 ESDP10768 282 aa3.4□□□□□ -1.87
USP49-205ENST00000448078 PMCHP20382 165 aa3.4□□□□□ -1.87
USP49-205ENST00000448078 ATP6V0CP27449 155 aa3.4□□□□□ -1.87
USP49-205ENST00000448078 AKR1C3P42330 323 aa3.4□□□□□ -1.87
USP49-205ENST00000448078 LINC00173Q6ZV60 143 aa3.4□□□□□ -1.87
USP49-205ENST00000448078 BAGE2Q86Y30 109 aa3.4□□□□□ -1.87
USP49-205ENST00000448078 PPP1R1CQ8WVI7 109 aa3.4□□□□□ -1.87
USP49-205ENST00000448078 PSMG3Q9BT73 122 aaPredicted RBP3.4□□□□□ -1.87
USP49-205ENST00000448078 ZNF861PO60384 105 aa3.39□□□□□ -1.87
USP49-205ENST00000448078 SIX6O95475 246 aa3.39□□□□□ -1.87
USP49-205ENST00000448078 MPC2O95563 127 aa3.39□□□□□ -1.87
USP49-205ENST00000448078 IL7P13232 177 aa3.39□□□□□ -1.87
USP49-205ENST00000448078 RPL28P46779 137 aaKnown RBP3.39□□□□□ -1.87
USP49-205ENST00000448078 KRTAP11-1Q8IUC1 163 aa3.39□□□□□ -1.87
USP49-205ENST00000448078 NUP35Q8NFH5 326 aa3.39□□□□□ -1.87
USP49-205ENST00000448078 BORCS7-ASMTA0A0B4J1R7 106 aa3.38□□□□□ -1.87
USP49-205ENST00000448078 CTXND1A0A1B0GTU2 59 aa3.38□□□□□ -1.87
USP49-205ENST00000448078 FAM74A7A6NL05 159 aa3.38□□□□□ -1.87
USP49-205ENST00000448078 SSNA1O43805 119 aa3.38□□□□□ -1.87
USP49-205ENST00000448078 NUPR1O60356 82 aa3.38□□□□□ -1.87
USP49-205ENST00000448078 PFDN1O60925 122 aa3.38□□□□□ -1.87
USP49-205ENST00000448078 NTF3P20783 257 aa3.38□□□□□ -1.87
USP49-205ENST00000448078 BTCP35070 178 aa3.38□□□□□ -1.87
USP49-205ENST00000448078 DEFA3P59666 94 aa3.38□□□□□ -1.87
USP49-205ENST00000448078 CYTL1Q9NRR1 136 aa3.38□□□□□ -1.87
USP49-205ENST00000448078 ALG5Q9Y673 324 aa3.38□□□□□ -1.87
USP49-205ENST00000448078 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.37□□□□□ -1.87
USP49-205ENST00000448078 IGKV2D-26A0A0A0MRZ7 120 aa3.37□□□□□ -1.87
USP49-205ENST00000448078 IGKV2-29A2NJV5 120 aaPredicted RBP3.37□□□□□ -1.87
USP49-205ENST00000448078 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.37□□□□□ -1.87
USP49-205ENST00000448078 I3L3M4 83 aa3.37□□□□□ -1.87
USP49-205ENST00000448078 NDUFA1O15239 70 aa3.37□□□□□ -1.87
USP49-205ENST00000448078 IFNA1P01562 189 aa3.37□□□□□ -1.87
USP49-205ENST00000448078 MEF2BQ02080 365 aaPredicted RBP3.37□□□□□ -1.87
USP49-205ENST00000448078 AKR1C8PQ5T2L2 129 aa3.37□□□□□ -1.87
USP49-205ENST00000448078 C2orf66Q6UXQ4 117 aa3.37□□□□□ -1.87
USP49-205ENST00000448078 FAM19A5Q7Z5A7 132 aaPredicted RBP3.37□□□□□ -1.87
USP49-205ENST00000448078 LINC00518Q8N0U6 118 aa3.37□□□□□ -1.87
USP49-205ENST00000448078 LINC00304Q8N9R0 145 aa3.37□□□□□ -1.87
USP49-205ENST00000448078 OR10D4PQ8NGN7 298 aa3.37□□□□□ -1.87
USP49-205ENST00000448078 ENKURQ8TC29 256 aa3.37□□□□□ -1.87
USP49-205ENST00000448078 MRAP2Q96G30 205 aa3.37□□□□□ -1.87
USP49-205ENST00000448078 PPDPFQ9H3Y8 114 aa3.37□□□□□ -1.87
USP49-205ENST00000448078 BIN3Q9NQY0 253 aa3.37□□□□□ -1.87
USP49-205ENST00000448078 G3V3Q6 166 aa3.36□□□□□ -1.87
USP49-205ENST00000448078 M0QXV9 152 aa3.36□□□□□ -1.87
USP49-205ENST00000448078 PLA2G10O15496 165 aa3.36□□□□□ -1.87
USP49-205ENST00000448078 ATP6V1G1O75348 118 aa3.36□□□□□ -1.87
USP49-205ENST00000448078 RPP21Q9H633 154 aaKnown RBP3.36□□□□□ -1.87
USP49-205ENST00000448078 WFDC1Q9HC57 220 aa3.36□□□□□ -1.87
USP49-205ENST00000448078 MRPL35Q9NZE8 188 aaKnown RBP3.36□□□□□ -1.87
USP49-205ENST00000448078 SPAG11BQ08648 103 aa3.35□□□□□ -1.87
USP49-205ENST00000448078 SPAG11AQ6PDA7 123 aa3.35□□□□□ -1.87
USP49-205ENST00000448078 PACRGQ96M98 296 aaPredicted RBP3.35□□□□□ -1.87
USP49-205ENST00000448078 RETNLBQ9BQ08 111 aa3.35□□□□□ -1.87
USP49-205ENST00000448078 CDC42SE2Q9NRR3 84 aa3.35□□□□□ -1.87
USP49-205ENST00000448078 ANAPC11Q9NYG5 84 aa3.35□□□□□ -1.87
USP49-205ENST00000448078 A4D1N5 150 aa3.34□□□□□ -1.87
USP49-205ENST00000448078 MAP1LC3B2A6NCE7 125 aa3.34□□□□□ -1.87
USP49-205ENST00000448078 SDHAF1A6NFY7 115 aa3.34□□□□□ -1.87
USP49-205ENST00000448078 INMT-MINDY4F8WBC2 141 aa3.34□□□□□ -1.87
USP49-205ENST00000448078 TLX1NBP0CAT3 122 aa3.34□□□□□ -1.87
USP49-205ENST00000448078 FCER1GP30273 86 aa3.34□□□□□ -1.87
USP49-205ENST00000448078 ASB16-AS1Q495Z4 193 aa3.34□□□□□ -1.87
USP49-205ENST00000448078 FP248Q71RG6 208 aaPredicted RBP3.34□□□□□ -1.87
USP49-205ENST00000448078 C5orf38Q86SI9 138 aa3.34□□□□□ -1.87
USP49-205ENST00000448078 MRPL52Q86TS9 123 aaKnown RBP3.34□□□□□ -1.87
USP49-205ENST00000448078 MAP1LC3BQ9GZQ8 125 aa3.34□□□□□ -1.87
USP49-205ENST00000448078 ST20Q9HBF5 79 aa3.34□□□□□ -1.87
USP49-205ENST00000448078 NDUFA12Q9UI09 145 aa3.34□□□□□ -1.87
USP49-205ENST00000448078 TRAV13-1A0A0B4J241 112 aa3.33□□□□□ -1.88
USP49-205ENST00000448078 H2BFSP57053 126 aa3.33□□□□□ -1.88
USP49-205ENST00000448078 CXCL6P80162 114 aa3.33□□□□□ -1.88
USP49-205ENST00000448078 FAM229BQ4G0N7 80 aa3.33□□□□□ -1.88
USP49-205ENST00000448078 LYZL1Q6UWQ5 148 aa3.33□□□□□ -1.88
USP49-205ENST00000448078 C9orf62Q8N4C0 152 aa3.33□□□□□ -1.88
USP49-205ENST00000448078 ORAOV1Q8WV07 137 aa3.33□□□□□ -1.88
USP49-205ENST00000448078 C7orf77A4D0Y5 90 aa3.32□□□□□ -1.88
USP49-205ENST00000448078 RAB19A4D1S5 217 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms