RNA–Protein interactions for RNA: ENST00000447734.5

PMS1-216, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5

Gene PMS1, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-216ENST00000447734 SSC5DA1L4H1 1573 aa1.34□□□□□ -2.2
PMS1-216ENST00000447734 F8WEM9 126 aa1.33□□□□□ -2.2
PMS1-216ENST00000447734 G3V318 75 aa1.33□□□□□ -2.2
PMS1-216ENST00000447734 LINC00472Q9H8W2 130 aa1.33□□□□□ -2.2
PMS1-216ENST00000447734 MYO7AQ13402 2215 aa1.33□□□□□ -2.2
PMS1-216ENST00000447734 SCN7AQ01118 1682 aa1.32□□□□□ -2.2
PMS1-216ENST00000447734 PPLO60437 1756 aa1.32□□□□□ -2.2
PMS1-216ENST00000447734 BTAF1O14981 1849 aa1.32□□□□□ -2.2
PMS1-216ENST00000447734 PIN1P1O15428 100 aa1.32□□□□□ -2.2
PMS1-216ENST00000447734 ARMS2P0C7Q2 107 aa1.32□□□□□ -2.2
PMS1-216ENST00000447734 SPINK9Q5DT21 86 aa1.32□□□□□ -2.2
PMS1-216ENST00000447734 MYO7BQ6PIF6 2116 aa1.32□□□□□ -2.2
PMS1-216ENST00000447734 PROK2Q9HC23 129 aa1.32□□□□□ -2.2
PMS1-216ENST00000447734 SPCS1Q9Y6A9 102 aa1.32□□□□□ -2.2
PMS1-216ENST00000447734 MAGI2Q86UL8 1455 aa1.31□□□□□ -2.2
PMS1-216ENST00000447734 ABCC2Q92887 1545 aa1.31□□□□□ -2.2
PMS1-216ENST00000447734 COL6A6A6NMZ7 2263 aa1.31□□□□□ -2.2
PMS1-216ENST00000447734 SNRPFP62306 86 aaKnown RBP1.31□□□□□ -2.2
PMS1-216ENST00000447734 HAMPP81172 84 aa1.31□□□□□ -2.2
PMS1-216ENST00000447734 HMGN3Q15651 99 aa1.31□□□□□ -2.2
PMS1-216ENST00000447734 ADIRFQ15847 76 aa1.31□□□□□ -2.2
PMS1-216ENST00000447734 TMEM263Q8WUH6 116 aaKnown RBP1.31□□□□□ -2.2
PMS1-216ENST00000447734 PSENENQ9NZ42 101 aa1.31□□□□□ -2.2
PMS1-216ENST00000447734 RAPGEF6Q8TEU7 1601 aa1.3□□□□□ -2.2
PMS1-216ENST00000447734 A0A087WVE0 104 aa1.3□□□□□ -2.2
PMS1-216ENST00000447734 LEPROTL1O95214 131 aa1.3□□□□□ -2.2
PMS1-216ENST00000447734 KRTAP21-2Q3LI59 83 aa1.3□□□□□ -2.2
PMS1-216ENST00000447734 NMSQ5H8A3 153 aa1.3□□□□□ -2.2
PMS1-216ENST00000447734 Q6JHZ5 121 aa1.3□□□□□ -2.2
PMS1-216ENST00000447734 FDCSPQ8NFU4 85 aa1.3□□□□□ -2.2
PMS1-216ENST00000447734 LINC00846Q9NV44 126 aa1.3□□□□□ -2.2
PMS1-216ENST00000447734 ROS1P08922 2347 aa1.3□□□□□ -2.2
PMS1-216ENST00000447734 LAMA4Q16363 1823 aa1.3□□□□□ -2.2
PMS1-216ENST00000447734 POLA1P09884 1462 aaPredicted RBP1.3□□□□□ -2.2
PMS1-216ENST00000447734 IQSEC2Q5JU85 1478 aa1.3□□□□□ -2.2
PMS1-216ENST00000447734 NLRP1Q9C000 1473 aa1.3□□□□□ -2.2
PMS1-216ENST00000447734 LRRC37A2A6NM11 1700 aa1.29□□□□□ -2.2
PMS1-216ENST00000447734 KANTRA0A1W2PQU2 76 aa1.29□□□□□ -2.2
PMS1-216ENST00000447734 HMGN2P05204 90 aaKnown RBP1.29□□□□□ -2.2
PMS1-216ENST00000447734 WFDC2Q14508 124 aa1.29□□□□□ -2.2
PMS1-216ENST00000447734 ALKAL2Q6UX46 152 aa1.29□□□□□ -2.2
PMS1-216ENST00000447734 ST20Q9HBF5 79 aa1.29□□□□□ -2.2
PMS1-216ENST00000447734 MYO3AQ8NEV4 1616 aa1.29□□□□□ -2.2
PMS1-216ENST00000447734 MYH4Q9Y623 1939 aa1.28□□□□□ -2.2
PMS1-216ENST00000447734 D6R8Y8 96 aa1.28□□□□□ -2.2
PMS1-216ENST00000447734 KRTAP10-4P60372 401 aaPredicted RBP1.28□□□□□ -2.2
PMS1-216ENST00000447734 C10orf113Q5VZT2 155 aa1.28□□□□□ -2.2
PMS1-216ENST00000447734 MUSTN1Q8IVN3 82 aa1.28□□□□□ -2.2
PMS1-216ENST00000447734 UBE2DNLQ8IWF7 75 aa1.28□□□□□ -2.2
PMS1-216ENST00000447734 ERVK-7P63135 1459 aa1.28□□□□□ -2.2
PMS1-216ENST00000447734 KIF14Q15058 1648 aa1.28□□□□□ -2.2
PMS1-216ENST00000447734 SUPT6HQ7KZ85 1726 aaKnown RBP1.28□□□□□ -2.2
PMS1-216ENST00000447734 WNK3Q9BYP7 1800 aa1.28□□□□□ -2.2
PMS1-216ENST00000447734 LINC00643Q86TS7 51 aa1.27□□□□□ -2.21
PMS1-216ENST00000447734 KDM5DQ9BY66 1539 aa1.26□□□□□ -2.21
PMS1-216ENST00000447734 RRBP1Q9P2E9 1410 aaKnown RBP1.26□□□□□ -2.21
PMS1-216ENST00000447734 ACYP1P07311 99 aa1.26□□□□□ -2.21
PMS1-216ENST00000447734 DEFB107AQ8IZN7 70 aa1.26□□□□□ -2.21
PMS1-216ENST00000447734 NUP188Q5SRE5 1749 aa1.26□□□□□ -2.21
PMS1-216ENST00000447734 S100A3P33764 101 aa1.25□□□□□ -2.21
PMS1-216ENST00000447734 LINC01600Q96MT4 127 aa1.25□□□□□ -2.21
PMS1-216ENST00000447734 MAP3K4Q9Y6R4 1608 aa1.25□□□□□ -2.21
PMS1-216ENST00000447734 NEXMIFQ5QGS0 1516 aa1.25□□□□□ -2.21
PMS1-216ENST00000447734 UBR1Q8IWV7 1749 aa1.24□□□□□ -2.21
PMS1-216ENST00000447734 TRBV6-1A0A0K0K1D8 114 aa1.24□□□□□ -2.21
PMS1-216ENST00000447734 IQCF6A8MYZ5 107 aa1.24□□□□□ -2.21
PMS1-216ENST00000447734 GNGT1P63211 74 aa1.24□□□□□ -2.21
PMS1-216ENST00000447734 DCAF1Q9Y4B6 1507 aa1.24□□□□□ -2.21
PMS1-216ENST00000447734 C1orf167Q5SNV9 1468 aa1.24□□□□□ -2.21
PMS1-216ENST00000447734 KNDC1Q76NI1 1749 aa1.23□□□□□ -2.21
PMS1-216ENST00000447734 CADP27708 2225 aa1.23□□□□□ -2.21
PMS1-216ENST00000447734 MYMXA0A1B0GTQ4 84 aa1.23□□□□□ -2.21
PMS1-216ENST00000447734 H0Y9P7 68 aa1.23□□□□□ -2.21
PMS1-216ENST00000447734 SPATA8Q6RVD6 105 aa1.23□□□□□ -2.21
PMS1-216ENST00000447734 SSBP3-AS1Q7Z2R9 100 aa1.23□□□□□ -2.21
PMS1-216ENST00000447734 DNAJC13O75165 2243 aa1.23□□□□□ -2.21
PMS1-216ENST00000447734 KDM3BQ7LBC6 1761 aa1.22□□□□□ -2.21
PMS1-216ENST00000447734 CUX1P39880 1505 aa1.22□□□□□ -2.21
PMS1-216ENST00000447734 A0A0D9SG42 100 aa1.22□□□□□ -2.21
PMS1-216ENST00000447734 PLXNB2O15031 1838 aa1.22□□□□□ -2.21
PMS1-216ENST00000447734 CACNA1CQ13936 2221 aa1.21□□□□□ -2.21
PMS1-216ENST00000447734 ERCC6L2Q5T890 1561 aa1.21□□□□□ -2.22
PMS1-216ENST00000447734 H3BUT2 72 aa1.21□□□□□ -2.22
PMS1-216ENST00000447734 PLGLAQ15195 96 aa1.21□□□□□ -2.22
PMS1-216ENST00000447734 BVES-AS1Q5T3Y7 98 aa1.21□□□□□ -2.22
PMS1-216ENST00000447734 ASXL3Q9C0F0 2248 aa1.21□□□□□ -2.22
PMS1-216ENST00000447734 DIP2BQ9P265 1576 aa1.21□□□□□ -2.22
PMS1-216ENST00000447734 NAV3Q8IVL0 2385 aa1.2□□□□□ -2.22
PMS1-216ENST00000447734 LRP6O75581 1613 aa1.2□□□□□ -2.22
PMS1-216ENST00000447734 SPINK7P58062 85 aa1.2□□□□□ -2.22
PMS1-216ENST00000447734 PLAC8Q9NZF1 115 aa1.2□□□□□ -2.22
PMS1-216ENST00000447734 MAP3K1Q13233 1512 aa1.2□□□□□ -2.22
PMS1-216ENST00000447734 CEBPZOSA8MTT3 80 aa1.19□□□□□ -2.22
PMS1-216ENST00000447734 IGLC2P0DOY2 106 aa1.19□□□□□ -2.22
PMS1-216ENST00000447734 IGLC3P0DOY3 106 aa1.19□□□□□ -2.22
PMS1-216ENST00000447734 C6orf201Q7Z4U5 140 aa1.19□□□□□ -2.22
PMS1-216ENST00000447734 C10orf95Q9H7T3 257 aa1.19□□□□□ -2.22
PMS1-216ENST00000447734 UBE2D4Q9Y2X8 147 aa1.19□□□□□ -2.22
PMS1-216ENST00000447734 MUC6Q6W4X9 2439 aa1.19□□□□□ -2.22
PMS1-216ENST00000447734 A0A1B0GU69 56 aa1.18□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms