RNA–Protein interactions for RNA: ENST00000447601.6

FAM3A-215, Transcript of family with sequence similarity 3 member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM3A, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-215ENST00000447601 MUSTN1Q8IVN3 82 aa13.62□□□□□ -0.23
FAM3A-215ENST00000447601 SPANXDQ9BXN6 97 aa13.62□□□□□ -0.23
FAM3A-215ENST00000447601 SPANXCQ9NY87 97 aa13.62□□□□□ -0.23
FAM3A-215ENST00000447601 A4D1N5 150 aa13.61□□□□□ -0.23
FAM3A-215ENST00000447601 F5H768 121 aa13.61□□□□□ -0.23
FAM3A-215ENST00000447601 CELA1Q9UNI1 258 aa13.61□□□□□ -0.23
FAM3A-215ENST00000447601 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.6□□□□□ -0.23
FAM3A-215ENST00000447601 TSPAN13O95857 204 aa13.6□□□□□ -0.23
FAM3A-215ENST00000447601 KRTAP10-11P60412 298 aa13.6□□□□□ -0.23
FAM3A-215ENST00000447601 EGFEM1PQ0D2K5 195 aa13.6□□□□□ -0.23
FAM3A-215ENST00000447601 MIAQ16674 131 aa13.6□□□□□ -0.23
FAM3A-215ENST00000447601 TEX48A0A1B0GUV7 120 aa13.59□□□□□ -0.23
FAM3A-215ENST00000447601 PRO1854Q9UHT4 67 aa13.59□□□□□ -0.23
FAM3A-215ENST00000447601 TRRAPQ9Y4A5 3859 aa13.58□□□□□ -0.24
FAM3A-215ENST00000447601 TRAV26-1A0A087WT03 109 aa13.57□□□□□ -0.24
FAM3A-215ENST00000447601 A0A0B4J2C4 111 aa13.57□□□□□ -0.24
FAM3A-215ENST00000447601 A0A1B0GUV1 79 aa13.57□□□□□ -0.24
FAM3A-215ENST00000447601 PRSS2P07478 247 aa13.57□□□□□ -0.24
FAM3A-215ENST00000447601 CIRBPQ14011 172 aaKnown RBP13.57□□□□□ -0.24
FAM3A-215ENST00000447601 ADAMTSL4-AS1Q5T5F5 129 aa13.57□□□□□ -0.24
FAM3A-215ENST00000447601 Q9H8V8 135 aa13.57□□□□□ -0.24
FAM3A-215ENST00000447601 IGKV3OR2-268A0A0C4DH90 116 aa13.57□□□□□ -0.24
FAM3A-215ENST00000447601 TMEM262E9PQX1 116 aa13.57□□□□□ -0.24
FAM3A-215ENST00000447601 A0A096LPF7 62 aa13.56□□□□□ -0.24
FAM3A-215ENST00000447601 LYRM7Q5U5X0 104 aa13.56□□□□□ -0.24
FAM3A-215ENST00000447601 RBX1P62877 108 aa13.55□□□□□ -0.24
FAM3A-215ENST00000447601 IFITM1P13164 125 aa13.55□□□□□ -0.24
FAM3A-215ENST00000447601 HERV-K104P63124 156 aa13.54□□□□□ -0.24
FAM3A-215ENST00000447601 ZNF625Q96I27 306 aaPredicted RBP13.54□□□□□ -0.24
FAM3A-215ENST00000447601 LINC00959A0A1B0GUT2 108 aa13.53□□□□□ -0.24
FAM3A-215ENST00000447601 PRIMA1Q86XR5 153 aa13.53□□□□□ -0.24
FAM3A-215ENST00000447601 MAST4O15021 2626 aa13.53□□□□□ -0.24
FAM3A-215ENST00000447601 IGHV3OR16-9A0A0B4J2B5 98 aa13.53□□□□□ -0.24
FAM3A-215ENST00000447601 MRPL23Q16540 153 aaKnown RBP13.53□□□□□ -0.24
FAM3A-215ENST00000447601 SH2D6Q7Z4S9 175 aa13.53□□□□□ -0.24
FAM3A-215ENST00000447601 LOC107984156A0A0G2JMH3 177 aa13.52□□□□□ -0.25
FAM3A-215ENST00000447601 HTN3P15516 51 aa13.52□□□□□ -0.25
FAM3A-215ENST00000447601 ARL17AQ8IVW1 177 aa13.52□□□□□ -0.25
FAM3A-215ENST00000447601 NBEAL2Q6ZNJ1 2754 aa13.51□□□□□ -0.25
FAM3A-215ENST00000447601 EIF4EBP3O60516 100 aaPredicted RBP13.51□□□□□ -0.25
FAM3A-215ENST00000447601 A0A087WZ39 114 aa13.5□□□□□ -0.25
FAM3A-215ENST00000447601 H3BMG7 143 aa13.5□□□□□ -0.25
FAM3A-215ENST00000447601 IGHV3-33P01772 117 aa13.5□□□□□ -0.25
FAM3A-215ENST00000447601 SS18Q15532 418 aa13.5□□□□□ -0.25
FAM3A-215ENST00000447601 COX7B2Q8TF08 81 aa13.5□□□□□ -0.25
FAM3A-215ENST00000447601 ERG28Q9UKR5 140 aa13.5□□□□□ -0.25
FAM3A-215ENST00000447601 ICOSQ9Y6W8 199 aa13.5□□□□□ -0.25
FAM3A-215ENST00000447601 COPS9Q8WXC6 57 aa13.5□□□□□ -0.25
FAM3A-215ENST00000447601 F8W1H4 67 aa13.49□□□□□ -0.25
FAM3A-215ENST00000447601 OCIAD2Q56VL3 154 aa13.49□□□□□ -0.25
FAM3A-215ENST00000447601 MEIG1Q5JSS6 88 aa13.49□□□□□ -0.25
FAM3A-215ENST00000447601 SFTA2Q6UW10 78 aa13.48□□□□□ -0.25
FAM3A-215ENST00000447601 NPC2P61916 151 aa13.48□□□□□ -0.25
FAM3A-215ENST00000447601 DAND5Q8N907 189 aa13.47□□□□□ -0.25
FAM3A-215ENST00000447601 RETNQ9HD89 108 aa13.47□□□□□ -0.25
FAM3A-215ENST00000447601 TRBV20-1A0A075B6N2 111 aa13.46□□□□□ -0.25
FAM3A-215ENST00000447601 LINC00308Q8TCZ7 52 aa13.46□□□□□ -0.25
FAM3A-215ENST00000447601 C5orf38Q86SI9 138 aa13.46□□□□□ -0.26
FAM3A-215ENST00000447601 TOMM7Q9P0U1 55 aa13.46□□□□□ -0.26
FAM3A-215ENST00000447601 PSMB2P49721 201 aa13.45□□□□□ -0.26
FAM3A-215ENST00000447601 Q1RN00 199 aa13.45□□□□□ -0.26
FAM3A-215ENST00000447601 LELP1Q5T871 98 aa13.45□□□□□ -0.26
FAM3A-215ENST00000447601 C11orf68Q9H3H3 251 aaKnown RBP13.45□□□□□ -0.26
FAM3A-215ENST00000447601 G3V4G9 280 aa13.44□□□□□ -0.26
FAM3A-215ENST00000447601 H7C2G1 150 aa13.44□□□□□ -0.26
FAM3A-215ENST00000447601 K7ERU9 68 aa13.44□□□□□ -0.26
FAM3A-215ENST00000447601 SCGB1C2P0DMR2 95 aa13.44□□□□□ -0.26
FAM3A-215ENST00000447601 XCL1P47992 114 aa13.44□□□□□ -0.26
FAM3A-215ENST00000447601 FBN1P35555 2871 aaKnown RBP13.44□□□□□ -0.26
FAM3A-215ENST00000447601 LINC01561Q8N1V8 128 aa13.43□□□□□ -0.26
FAM3A-215ENST00000447601 A0A0U1RRA0 63 aa13.43□□□□□ -0.26
FAM3A-215ENST00000447601 CLPSL2Q6UWE3 100 aa13.43□□□□□ -0.26
FAM3A-215ENST00000447601 LINC00269Q8N2A0 174 aa13.43□□□□□ -0.26
FAM3A-215ENST00000447601 PPDPFQ9H3Y8 114 aa13.43□□□□□ -0.26
FAM3A-215ENST00000447601 ANGP03950 147 aaKnown RBP13.42□□□□□ -0.26
FAM3A-215ENST00000447601 PRO0461Q9UI25 63 aa13.42□□□□□ -0.26
FAM3A-215ENST00000447601 H3BNG1 76 aa13.41□□□□□ -0.26
FAM3A-215ENST00000447601 TCL1BO95988 128 aa13.41□□□□□ -0.26
FAM3A-215ENST00000447601 REG3AQ06141 175 aa13.4□□□□□ -0.26
FAM3A-215ENST00000447601 WFDC2Q14508 124 aa13.4□□□□□ -0.26
FAM3A-215ENST00000447601 TRBV30A0A0K0K1B3 111 aa13.39□□□□□ -0.27
FAM3A-215ENST00000447601 CD164L2Q6UWJ8 174 aa13.39□□□□□ -0.27
FAM3A-215ENST00000447601 SOSTDC1Q6X4U4 206 aa13.38□□□□□ -0.27
FAM3A-215ENST00000447601 C6orf226Q5I0X4 101 aa13.37□□□□□ -0.27
FAM3A-215ENST00000447601 Q8IZM0 81 aa13.37□□□□□ -0.27
FAM3A-215ENST00000447601 Q8N3U1 123 aa13.37□□□□□ -0.27
FAM3A-215ENST00000447601 CHCHD10Q8WYQ3 142 aaPredicted RBP13.37□□□□□ -0.27
FAM3A-215ENST00000447601 IBA57-AS1B1ANH7 110 aa13.36□□□□□ -0.27
FAM3A-215ENST00000447601 RPL13AP40429 203 aaKnown RBP13.36□□□□□ -0.27
FAM3A-215ENST00000447601 LYPD5Q6UWN5 251 aa13.36□□□□□ -0.27
FAM3A-215ENST00000447601 Q6ZTC4 211 aa13.36□□□□□ -0.27
FAM3A-215ENST00000447601 MTURNQ8N3F0 131 aa13.36□□□□□ -0.27
FAM3A-215ENST00000447601 COX7A2LO14548 114 aa13.36□□□□□ -0.27
FAM3A-215ENST00000447601 TRIAP1O43715 76 aa13.36□□□□□ -0.27
FAM3A-215ENST00000447601 COX6CP09669 75 aa13.34□□□□□ -0.27
FAM3A-215ENST00000447601 KPRPQ5T749 579 aaPredicted RBP13.34□□□□□ -0.27
FAM3A-215ENST00000447601 MIR7-3HGQ8N6C7 128 aa13.34□□□□□ -0.27
FAM3A-215ENST00000447601 STAB1Q9NY15 2570 aa13.34□□□□□ -0.27
FAM3A-215ENST00000447601 A0A0J9YWU9 116 aa13.34□□□□□ -0.27
FAM3A-215ENST00000447601 LINC00158P58513 81 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms