RNA–Protein interactions for RNA: ENST00000447232.6

PMS1-215, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-215ENST00000447232 VAMP2P63027 116 aa1.61□□□□□ -2.15
PMS1-215ENST00000447232 PRLHP81277 87 aa1.61□□□□□ -2.15
PMS1-215ENST00000447232 SPANXN1Q5VSR9 72 aa1.61□□□□□ -2.15
PMS1-215ENST00000447232 Q86TA4 180 aa1.61□□□□□ -2.15
PMS1-215ENST00000447232 MRPL52Q86TS9 123 aaKnown RBP1.61□□□□□ -2.15
PMS1-215ENST00000447232 ORAOV1Q8WV07 137 aa1.61□□□□□ -2.15
PMS1-215ENST00000447232 TMEM101Q96IK0 257 aa1.61□□□□□ -2.15
PMS1-215ENST00000447232 BTF3L4Q96K17 158 aa1.61□□□□□ -2.15
PMS1-215ENST00000447232 SPRR4Q96PI1 79 aa1.61□□□□□ -2.15
PMS1-215ENST00000447232 ALG5Q9Y673 324 aa1.61□□□□□ -2.15
PMS1-215ENST00000447232 C20orf202A1L168 122 aa1.61□□□□□ -2.15
PMS1-215ENST00000447232 C9orf170A2RU37 121 aa1.61□□□□□ -2.15
PMS1-215ENST00000447232 SMIM1B2RUZ4 78 aa1.61□□□□□ -2.15
PMS1-215ENST00000447232 MGPP08493 103 aa1.61□□□□□ -2.15
PMS1-215ENST00000447232 RPS20P60866 119 aaKnown RBP1.61□□□□□ -2.15
PMS1-215ENST00000447232 PNRC1Q12796 327 aaPredicted RBP1.61□□□□□ -2.15
PMS1-215ENST00000447232 KIAA0087Q14695 138 aa1.61□□□□□ -2.15
PMS1-215ENST00000447232 MARVELD1Q9BSK0 173 aa1.61□□□□□ -2.15
PMS1-215ENST00000447232 WDR61Q9GZS3 305 aaKnown RBP1.61□□□□□ -2.15
PMS1-215ENST00000447232 UPK1BO75841 260 aa1.6□□□□□ -2.15
PMS1-215ENST00000447232 APCSP02743 223 aa1.6□□□□□ -2.15
PMS1-215ENST00000447232 DEFA3P59666 94 aa1.6□□□□□ -2.15
PMS1-215ENST00000447232 LSM3P62310 102 aaKnown RBP1.6□□□□□ -2.15
PMS1-215ENST00000447232 STX12Q86Y82 276 aa1.6□□□□□ -2.15
PMS1-215ENST00000447232 IGLV5-45A0A087WSX0 123 aa1.6□□□□□ -2.15
PMS1-215ENST00000447232 ZNF727A8MUV8 499 aa1.6□□□□□ -2.15
PMS1-215ENST00000447232 IGLV6-57P01721 117 aa1.6□□□□□ -2.15
PMS1-215ENST00000447232 DSCR10P59022 87 aa1.6□□□□□ -2.15
PMS1-215ENST00000447232 RPL24P83731 157 aaKnown RBP1.6□□□□□ -2.15
PMS1-215ENST00000447232 GNB1LQ9BYB4 327 aa1.6□□□□□ -2.15
PMS1-215ENST00000447232 XAGE1AQ9HD64 81 aa1.6□□□□□ -2.15
PMS1-215ENST00000447232 LSM5Q9Y4Y9 91 aaKnown RBP1.6□□□□□ -2.15
PMS1-215ENST00000447232 IGHV3OR16-9A0A0B4J2B5 98 aa1.59□□□□□ -2.15
PMS1-215ENST00000447232 A6NN06 94 aa1.59□□□□□ -2.15
PMS1-215ENST00000447232 LINC00469Q8N7U9 141 aa1.59□□□□□ -2.15
PMS1-215ENST00000447232 MCFD2Q8NI22 146 aa1.59□□□□□ -2.15
PMS1-215ENST00000447232 GEMIN7Q9H840 131 aaKnown RBP1.59□□□□□ -2.15
PMS1-215ENST00000447232 ZFP30Q9Y2G7 519 aa1.59□□□□□ -2.15
PMS1-215ENST00000447232 AHNAK2Q8IVF2 5795 aa1.59□□□□□ -2.15
PMS1-215ENST00000447232 C17orf112F2Z3M2 114 aa1.59□□□□□ -2.15
PMS1-215ENST00000447232 ARL14EPLP0DKL9 152 aa1.59□□□□□ -2.15
PMS1-215ENST00000447232 FOXA3P55318 350 aaPredicted RBP1.59□□□□□ -2.15
PMS1-215ENST00000447232 SSTP61278 116 aa1.59□□□□□ -2.15
PMS1-215ENST00000447232 NCS1P62166 190 aa1.59□□□□□ -2.15
PMS1-215ENST00000447232 LRRC37A5PQ49AS3 106 aa1.59□□□□□ -2.15
PMS1-215ENST00000447232 LCE3EQ5T5B0 92 aa1.59□□□□□ -2.15
PMS1-215ENST00000447232 C2orf82Q6UX34 121 aa1.59□□□□□ -2.15
PMS1-215ENST00000447232 CNBD2Q96M20 576 aa1.59□□□□□ -2.15
PMS1-215ENST00000447232 TRAV13-1A0A0B4J241 112 aa1.58□□□□□ -2.16
PMS1-215ENST00000447232 GAGE10A6NGK3 116 aa1.58□□□□□ -2.16
PMS1-215ENST00000447232 HMGB3O15347 200 aaKnown RBP1.58□□□□□ -2.16
PMS1-215ENST00000447232 NEDD8Q15843 81 aa1.58□□□□□ -2.16
PMS1-215ENST00000447232 FAM19A1Q7Z5A9 133 aa1.58□□□□□ -2.16
PMS1-215ENST00000447232 C20orf166-AS1Q96NR2 134 aa1.58□□□□□ -2.16
PMS1-215ENST00000447232 CSDC2Q9Y534 153 aaKnown RBP1.58□□□□□ -2.16
PMS1-215ENST00000447232 PEX7O00628 323 aa1.58□□□□□ -2.16
PMS1-215ENST00000447232 LTAP01374 205 aa1.58□□□□□ -2.16
PMS1-215ENST00000447232 STAG3L2P0CL84 134 aa1.58□□□□□ -2.16
PMS1-215ENST00000447232 STAG3L3P0CL85 134 aa1.58□□□□□ -2.16
PMS1-215ENST00000447232 PVALBP20472 110 aaPredicted RBP1.58□□□□□ -2.16
PMS1-215ENST00000447232 SPRR2DP22532 72 aa1.58□□□□□ -2.16
PMS1-215ENST00000447232 RPL32P62910 135 aaKnown RBP1.58□□□□□ -2.16
PMS1-215ENST00000447232 IL15RAQ13261 267 aa1.58□□□□□ -2.16
PMS1-215ENST00000447232 SSBP3-AS1Q7Z2R9 100 aa1.58□□□□□ -2.16
PMS1-215ENST00000447232 CBLN2Q8IUK8 224 aa1.58□□□□□ -2.16
PMS1-215ENST00000447232 GATD1Q8NB37 220 aa1.58□□□□□ -2.16
PMS1-215ENST00000447232 MRAP2Q96G30 205 aa1.58□□□□□ -2.16
PMS1-215ENST00000447232 SPRR2FQ96RM1 72 aa1.58□□□□□ -2.16
PMS1-215ENST00000447232 CCDC32Q9BV29 185 aa1.58□□□□□ -2.16
PMS1-215ENST00000447232 DSTQ03001 7570 aaKnown RBP1.58□□□□□ -2.16
PMS1-215ENST00000447232 A0A1W2PRE2 83 aa1.57□□□□□ -2.16
PMS1-215ENST00000447232 GCHFRP30047 84 aa1.57□□□□□ -2.16
PMS1-215ENST00000447232 FAUP35544 74 aaKnown RBP1.57□□□□□ -2.16
PMS1-215ENST00000447232 LINC00483Q53H64 154 aa1.57□□□□□ -2.16
PMS1-215ENST00000447232 RNASE13Q5GAN3 156 aaKnown RBP1.57□□□□□ -2.16
PMS1-215ENST00000447232 MZT2BQ6NZ67 158 aa1.57□□□□□ -2.16
PMS1-215ENST00000447232 RPL39LQ96EH5 51 aaKnown RBP1.57□□□□□ -2.16
PMS1-215ENST00000447232 TMEM126AQ9H061 195 aa1.57□□□□□ -2.16
PMS1-215ENST00000447232 IGKV2-28A0A075B6P5 120 aa1.57□□□□□ -2.16
PMS1-215ENST00000447232 A0A1W2PPV4 95 aa1.57□□□□□ -2.16
PMS1-215ENST00000447232 SDHAF1A6NFY7 115 aa1.57□□□□□ -2.16
PMS1-215ENST00000447232 I3L3M4 83 aa1.57□□□□□ -2.16
PMS1-215ENST00000447232 M0R378 163 aa1.57□□□□□ -2.16
PMS1-215ENST00000447232 IGKV2D-28P01615 120 aa1.57□□□□□ -2.16
PMS1-215ENST00000447232 IGLC6P0CF74 106 aa1.57□□□□□ -2.16
PMS1-215ENST00000447232 VBP1P61758 197 aa1.57□□□□□ -2.16
PMS1-215ENST00000447232 MOBPQ13875 183 aa1.57□□□□□ -2.16
PMS1-215ENST00000447232 FAM210AQ96ND0 272 aa1.57□□□□□ -2.16
PMS1-215ENST00000447232 ZNF706Q9Y5V0 76 aaPredicted RBP1.57□□□□□ -2.16
PMS1-215ENST00000447232 TMEM238C9JI98 176 aa1.56□□□□□ -2.16
PMS1-215ENST00000447232 KRTAP5-10Q6L8G5 202 aa1.56□□□□□ -2.16
PMS1-215ENST00000447232 FAM231DQ6ZW35 169 aa1.56□□□□□ -2.16
PMS1-215ENST00000447232 LINC01551Q86U37 167 aa1.56□□□□□ -2.16
PMS1-215ENST00000447232 HIST1H2BAQ96A08 127 aa1.56□□□□□ -2.16
PMS1-215ENST00000447232 FMC1Q96HJ9 113 aa1.56□□□□□ -2.16
PMS1-215ENST00000447232 HIGD2AQ9BW72 106 aa1.56□□□□□ -2.16
PMS1-215ENST00000447232 RPS10P5Q9NQ39 176 aa1.56□□□□□ -2.16
PMS1-215ENST00000447232 CHTOPQ9Y3Y2 248 aaKnown RBP1.56□□□□□ -2.16
PMS1-215ENST00000447232 NDUFB6O95139 128 aa1.56□□□□□ -2.16
PMS1-215ENST00000447232 LCE3AQ5TA76 89 aa1.56□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms