RNA–Protein interactions for RNA: ENST00000446933.1

KNOP1P3-201, Transcript of lysine rich nucleolar protein 1 pseudogene 3, humanhuman

BASIC

Gene KNOP1P3, Length 426 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNOP1P3-201ENST00000446933 SS18Q15532 418 aa3.35□□□□□ -1.87
KNOP1P3-201ENST00000446933 SPATA12Q7Z6I5 190 aa3.35□□□□□ -1.87
KNOP1P3-201ENST00000446933 C18orf32Q8TCD1 76 aa3.35□□□□□ -1.87
KNOP1P3-201ENST00000446933 TMEM141Q96I45 108 aa3.35□□□□□ -1.87
KNOP1P3-201ENST00000446933 Q9HAA7 133 aa3.35□□□□□ -1.87
KNOP1P3-201ENST00000446933 CYSLTR1Q9Y271 337 aa3.35□□□□□ -1.87
KNOP1P3-201ENST00000446933 TRAPPC1Q9Y5R8 145 aa3.35□□□□□ -1.87
KNOP1P3-201ENST00000446933 FAT1Q14517 4588 aa3.34□□□□□ -1.87
KNOP1P3-201ENST00000446933 COLCA2A8K830 154 aa3.34□□□□□ -1.87
KNOP1P3-201ENST00000446933 LINC00614P0C842 121 aa3.34□□□□□ -1.87
KNOP1P3-201ENST00000446933 RPL39P62891 51 aaKnown RBP3.34□□□□□ -1.87
KNOP1P3-201ENST00000446933 SEC11AP67812 179 aa3.34□□□□□ -1.87
KNOP1P3-201ENST00000446933 FABP9Q0Z7S8 132 aa3.34□□□□□ -1.87
KNOP1P3-201ENST00000446933 CIRBPQ14011 172 aaKnown RBP3.34□□□□□ -1.87
KNOP1P3-201ENST00000446933 RNASEKQ6P5S7 137 aaKnown RBP3.34□□□□□ -1.87
KNOP1P3-201ENST00000446933 C2orf66Q6UXQ4 117 aa3.34□□□□□ -1.87
KNOP1P3-201ENST00000446933 C9orf163Q8N9P6 203 aa3.34□□□□□ -1.87
KNOP1P3-201ENST00000446933 PRSS3P2Q8NHM4 247 aa3.34□□□□□ -1.87
KNOP1P3-201ENST00000446933 CHCHD10Q8WYQ3 142 aaPredicted RBP3.34□□□□□ -1.87
KNOP1P3-201ENST00000446933 CHCHD1Q96BP2 118 aaKnown RBP3.34□□□□□ -1.87
KNOP1P3-201ENST00000446933 IGLV4-3A0A075B6K6 122 aa3.33□□□□□ -1.88
KNOP1P3-201ENST00000446933 A0A087WZ39 114 aa3.33□□□□□ -1.88
KNOP1P3-201ENST00000446933 C16orf90A8MZG2 172 aa3.33□□□□□ -1.88
KNOP1P3-201ENST00000446933 EPM2AB3EWF7 344 aa3.33□□□□□ -1.88
KNOP1P3-201ENST00000446933 USP17L23D6RBM5 183 aa3.33□□□□□ -1.88
KNOP1P3-201ENST00000446933 PRSS1P07477 247 aa3.33□□□□□ -1.88
KNOP1P3-201ENST00000446933 UBE2D1P51668 147 aa3.33□□□□□ -1.88
KNOP1P3-201ENST00000446933 TEX43Q6ZNM6 134 aa3.33□□□□□ -1.88
KNOP1P3-201ENST00000446933 LINC00173Q6ZV60 143 aa3.33□□□□□ -1.88
KNOP1P3-201ENST00000446933 C15orf56Q8N910 161 aa3.33□□□□□ -1.88
KNOP1P3-201ENST00000446933 OR10D4PQ8NGN7 298 aa3.33□□□□□ -1.88
KNOP1P3-201ENST00000446933 BAALCQ8WXS3 180 aa3.33□□□□□ -1.88
KNOP1P3-201ENST00000446933 C2orf48Q96LS8 159 aa3.33□□□□□ -1.88
KNOP1P3-201ENST00000446933 VCX2Q9H322 139 aa3.33□□□□□ -1.88
KNOP1P3-201ENST00000446933 PKIGQ9Y2B9 76 aa3.33□□□□□ -1.88
KNOP1P3-201ENST00000446933 IGLV5-45A0A087WSX0 123 aa3.32□□□□□ -1.88
KNOP1P3-201ENST00000446933 A0A096LNJ9 63 aa3.32□□□□□ -1.88
KNOP1P3-201ENST00000446933 IGLV5-52A0A0A0MRZ9 124 aa3.32□□□□□ -1.88
KNOP1P3-201ENST00000446933 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.32□□□□□ -1.88
KNOP1P3-201ENST00000446933 IGHV1-58A0A0C4DH39 117 aa3.32□□□□□ -1.88
KNOP1P3-201ENST00000446933 LOC389332A0A1B0GUA5 103 aa3.32□□□□□ -1.88
KNOP1P3-201ENST00000446933 COX7A2LO14548 114 aa3.32□□□□□ -1.88
KNOP1P3-201ENST00000446933 S100A1P23297 94 aa3.32□□□□□ -1.88
KNOP1P3-201ENST00000446933 HERVK_113P63121 156 aa3.32□□□□□ -1.88
KNOP1P3-201ENST00000446933 WFDC2Q14508 124 aa3.32□□□□□ -1.88
KNOP1P3-201ENST00000446933 KIAA1644Q3SXP7 199 aa3.32□□□□□ -1.88
KNOP1P3-201ENST00000446933 PDZD11Q5EBL8 140 aa3.32□□□□□ -1.88
KNOP1P3-201ENST00000446933 LINC00242Q5T6M2 205 aa3.32□□□□□ -1.88
KNOP1P3-201ENST00000446933 Q6ZN92 141 aa3.32□□□□□ -1.88
KNOP1P3-201ENST00000446933 SDIM1Q6ZPB5 146 aa3.32□□□□□ -1.88
KNOP1P3-201ENST00000446933 CBLN2Q8IUK8 224 aa3.32□□□□□ -1.88
KNOP1P3-201ENST00000446933 URB1-AS1Q96HZ7 61 aa3.32□□□□□ -1.88
KNOP1P3-201ENST00000446933 PCLOQ9Y6V0 5065 aa3.32□□□□□ -1.88
KNOP1P3-201ENST00000446933 IGLV10-54A0A075B6I4 117 aa3.31□□□□□ -1.88
KNOP1P3-201ENST00000446933 IGHV3-64A0A075B6Q5 118 aa3.31□□□□□ -1.88
KNOP1P3-201ENST00000446933 TINCRA0A1B0GVN0 87 aa3.31□□□□□ -1.88
KNOP1P3-201ENST00000446933 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.31□□□□□ -1.88
KNOP1P3-201ENST00000446933 ATP5LO75964 103 aa3.31□□□□□ -1.88
KNOP1P3-201ENST00000446933 APOMO95445 188 aa3.31□□□□□ -1.88
KNOP1P3-201ENST00000446933 HBDP02042 147 aa3.31□□□□□ -1.88
KNOP1P3-201ENST00000446933 SLPIP03973 132 aa3.31□□□□□ -1.88
KNOP1P3-201ENST00000446933 XCL1P47992 114 aa3.31□□□□□ -1.88
KNOP1P3-201ENST00000446933 XGP55808 180 aa3.31□□□□□ -1.88
KNOP1P3-201ENST00000446933 KRTAP10-1P60331 282 aa3.31□□□□□ -1.88
KNOP1P3-201ENST00000446933 COA6Q5JTJ3 125 aaKnown RBP3.31□□□□□ -1.88
KNOP1P3-201ENST00000446933 Q6ZUT4 128 aa3.31□□□□□ -1.88
KNOP1P3-201ENST00000446933 FA2HQ7L5A8 372 aa3.31□□□□□ -1.88
KNOP1P3-201ENST00000446933 DEFB104AQ8WTQ1 72 aa3.31□□□□□ -1.88
KNOP1P3-201ENST00000446933 PACRGQ96M98 296 aaPredicted RBP3.31□□□□□ -1.88
KNOP1P3-201ENST00000446933 SCGB3A1Q96QR1 104 aa3.31□□□□□ -1.88
KNOP1P3-201ENST00000446933 C2orf88Q9BSF0 95 aa3.31□□□□□ -1.88
KNOP1P3-201ENST00000446933 KRTAP9-2Q9BYQ4 174 aa3.31□□□□□ -1.88
KNOP1P3-201ENST00000446933 CST9LQ9H4G1 147 aa3.31□□□□□ -1.88
KNOP1P3-201ENST00000446933 LINC00474Q9P2X8 69 aa3.31□□□□□ -1.88
KNOP1P3-201ENST00000446933 TRAV13-1A0A0B4J241 112 aa3.3□□□□□ -1.88
KNOP1P3-201ENST00000446933 TRAV12-1A0A0B4J245 112 aa3.3□□□□□ -1.88
KNOP1P3-201ENST00000446933 IFITM10A6NMD0 228 aa3.3□□□□□ -1.88
KNOP1P3-201ENST00000446933 TRGC2P03986 189 aa3.3□□□□□ -1.88
KNOP1P3-201ENST00000446933 TLX1NBP0CAT3 122 aa3.3□□□□□ -1.88
KNOP1P3-201ENST00000446933 KIAA0087Q14695 138 aa3.3□□□□□ -1.88
KNOP1P3-201ENST00000446933 PMVKQ15126 192 aa3.3□□□□□ -1.88
KNOP1P3-201ENST00000446933 CLPSL2Q6UWE3 100 aa3.3□□□□□ -1.88
KNOP1P3-201ENST00000446933 Q8N1X5 172 aa3.3□□□□□ -1.88
KNOP1P3-201ENST00000446933 OPRPNQ99935 248 aaPredicted RBP3.3□□□□□ -1.88
KNOP1P3-201ENST00000446933 CHAC1Q9BUX1 264 aa3.3□□□□□ -1.88
KNOP1P3-201ENST00000446933 MRPL35Q9NZE8 188 aaKnown RBP3.3□□□□□ -1.88
KNOP1P3-201ENST00000446933 MYCBP2O75592 4640 aa3.29□□□□□ -1.88
KNOP1P3-201ENST00000446933 KRTAP9-6A0A140TA67 174 aa3.29□□□□□ -1.88
KNOP1P3-201ENST00000446933 hDV102S1A0JD36 115 aa3.29□□□□□ -1.88
KNOP1P3-201ENST00000446933 KRTAP9-7A8MTY7 169 aa3.29□□□□□ -1.88
KNOP1P3-201ENST00000446933 IGLC3P0DOY3 106 aa3.29□□□□□ -1.88
KNOP1P3-201ENST00000446933 SFTA2Q6UW10 78 aa3.29□□□□□ -1.88
KNOP1P3-201ENST00000446933 Q8IZM0 81 aa3.29□□□□□ -1.88
KNOP1P3-201ENST00000446933 IGLV4-69A0A075B6H9 119 aa3.28□□□□□ -1.88
KNOP1P3-201ENST00000446933 IGLV5-39A0A0G2JS06 123 aa3.28□□□□□ -1.88
KNOP1P3-201ENST00000446933 TRBV30A0A0K0K1B3 111 aa3.28□□□□□ -1.88
KNOP1P3-201ENST00000446933 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.28□□□□□ -1.88
KNOP1P3-201ENST00000446933 LECT2O14960 151 aa3.28□□□□□ -1.88
KNOP1P3-201ENST00000446933 COX6A2Q02221 97 aa3.28□□□□□ -1.88
KNOP1P3-201ENST00000446933 SYCNQ0VAF6 134 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms