RNA–Protein interactions for RNA: ENST00000446690.2

COL6A4P1-201, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

TSL 2 BASIC

Gene COL6A4P1, Length 2,336 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-201ENST00000446690 APOMO95445 188 aa6.68□□□□□ -1.34
COL6A4P1-201ENST00000446690 ATP6V0E2Q8NHE4 81 aa6.68□□□□□ -1.34
COL6A4P1-201ENST00000446690 PRO0255Q9UI72 69 aa6.68□□□□□ -1.34
COL6A4P1-201ENST00000446690 FBN1P35555 2871 aaKnown RBP6.68□□□□□ -1.34
COL6A4P1-201ENST00000446690 MIFP14174 115 aa6.68□□□□□ -1.34
COL6A4P1-201ENST00000446690 HTN3P15516 51 aa6.68□□□□□ -1.34
COL6A4P1-201ENST00000446690 FOXI1Q12951 378 aa6.68□□□□□ -1.34
COL6A4P1-201ENST00000446690 LINC00242Q5T6M2 205 aa6.68□□□□□ -1.34
COL6A4P1-201ENST00000446690 SHISA2Q6UWI4 295 aa6.68□□□□□ -1.34
COL6A4P1-201ENST00000446690 RNF183Q96D59 192 aa6.68□□□□□ -1.34
COL6A4P1-201ENST00000446690 VSIG2Q96IQ7 327 aa6.68□□□□□ -1.34
COL6A4P1-201ENST00000446690 CELA1Q9UNI1 258 aa6.68□□□□□ -1.34
COL6A4P1-201ENST00000446690 TMEM262E9PQX1 116 aa6.67□□□□□ -1.34
COL6A4P1-201ENST00000446690 TSPAN13O95857 204 aa6.67□□□□□ -1.34
COL6A4P1-201ENST00000446690 MT-ATP8P03928 68 aa6.67□□□□□ -1.34
COL6A4P1-201ENST00000446690 SMCPP49901 116 aaPredicted RBP6.67□□□□□ -1.34
COL6A4P1-201ENST00000446690 TIRAPP58753 221 aa6.67□□□□□ -1.34
COL6A4P1-201ENST00000446690 Q8NAQ8 132 aa6.67□□□□□ -1.34
COL6A4P1-201ENST00000446690 HERVK_113P63121 156 aa6.67□□□□□ -1.34
COL6A4P1-201ENST00000446690 C10orf126Q8N4M7 172 aa6.67□□□□□ -1.34
COL6A4P1-201ENST00000446690 IGLV4-60A0A075B6I1 120 aa6.66□□□□□ -1.34
COL6A4P1-201ENST00000446690 F5H768 121 aa6.66□□□□□ -1.34
COL6A4P1-201ENST00000446690 SPART-AS1P0CW21 52 aa6.66□□□□□ -1.34
COL6A4P1-201ENST00000446690 NDUFA12Q9UI09 145 aa6.66□□□□□ -1.34
COL6A4P1-201ENST00000446690 A0A0J9YXY3 114 aa6.66□□□□□ -1.34
COL6A4P1-201ENST00000446690 A6NJY4 79 aa6.66□□□□□ -1.34
COL6A4P1-201ENST00000446690 H7C423 109 aa6.66□□□□□ -1.34
COL6A4P1-201ENST00000446690 XGP55808 180 aa6.66□□□□□ -1.34
COL6A4P1-201ENST00000446690 IGHV3-30P01768 117 aa6.65□□□□□ -1.34
COL6A4P1-201ENST00000446690 IGHV3-30-5P0DP03 117 aa6.65□□□□□ -1.34
COL6A4P1-201ENST00000446690 RETNQ9HD89 108 aa6.65□□□□□ -1.34
COL6A4P1-201ENST00000446690 ATP5G1P05496 136 aa6.65□□□□□ -1.35
COL6A4P1-201ENST00000446690 ERG28Q9UKR5 140 aa6.65□□□□□ -1.35
COL6A4P1-201ENST00000446690 IGLV5-45A0A087WSX0 123 aa6.64□□□□□ -1.35
COL6A4P1-201ENST00000446690 PRSS2P07478 247 aa6.64□□□□□ -1.35
COL6A4P1-201ENST00000446690 PGPEP1Q9NXJ5 209 aa6.64□□□□□ -1.35
COL6A4P1-201ENST00000446690 MUSTN1Q8IVN3 82 aa6.64□□□□□ -1.35
COL6A4P1-201ENST00000446690 NPC2P61916 151 aa6.63□□□□□ -1.35
COL6A4P1-201ENST00000446690 ZNF625Q96I27 306 aaPredicted RBP6.63□□□□□ -1.35
COL6A4P1-201ENST00000446690 CARD19Q96LW7 228 aa6.63□□□□□ -1.35
COL6A4P1-201ENST00000446690 EGFEM1PQ0D2K5 195 aa6.62□□□□□ -1.35
COL6A4P1-201ENST00000446690 ZFAND6Q6FIF0 208 aa6.62□□□□□ -1.35
COL6A4P1-201ENST00000446690 SFTA2Q6UW10 78 aa6.62□□□□□ -1.35
COL6A4P1-201ENST00000446690 FAM19A3Q7Z5A8 133 aa6.62□□□□□ -1.35
COL6A4P1-201ENST00000446690 SMIM1B2RUZ4 78 aa6.62□□□□□ -1.35
COL6A4P1-201ENST00000446690 ADAMTSL4-AS1Q5T5F5 129 aa6.62□□□□□ -1.35
COL6A4P1-201ENST00000446690 CLPSL2Q6UWE3 100 aa6.62□□□□□ -1.35
COL6A4P1-201ENST00000446690 A0A0U1RRA0 63 aa6.61□□□□□ -1.35
COL6A4P1-201ENST00000446690 A4D1N5 150 aa6.61□□□□□ -1.35
COL6A4P1-201ENST00000446690 CFC1BP0CG36 223 aa6.61□□□□□ -1.35
COL6A4P1-201ENST00000446690 CFC1P0CG37 223 aa6.61□□□□□ -1.35
COL6A4P1-201ENST00000446690 PPDPFLQ8WWR9 84 aa6.61□□□□□ -1.35
COL6A4P1-201ENST00000446690 Q9H8V8 135 aa6.61□□□□□ -1.35
COL6A4P1-201ENST00000446690 SS18L2Q9UHA2 77 aa6.61□□□□□ -1.35
COL6A4P1-201ENST00000446690 PSMB2P49721 201 aa6.61□□□□□ -1.35
COL6A4P1-201ENST00000446690 DAND5Q8N907 189 aa6.61□□□□□ -1.35
COL6A4P1-201ENST00000446690 BAHCC1Q9P281 2608 aa6.6□□□□□ -1.35
COL6A4P1-201ENST00000446690 IGLV5-39A0A0G2JS06 123 aa6.6□□□□□ -1.35
COL6A4P1-201ENST00000446690 NDUFA1O15239 70 aa6.6□□□□□ -1.35
COL6A4P1-201ENST00000446690 TEN1Q86WV5 123 aa6.6□□□□□ -1.35
COL6A4P1-201ENST00000446690 LITAFQ99732 161 aa6.6□□□□□ -1.35
COL6A4P1-201ENST00000446690 ANAPC13Q9BS18 74 aa6.6□□□□□ -1.35
COL6A4P1-201ENST00000446690 TOMM7Q9P0U1 55 aa6.6□□□□□ -1.35
COL6A4P1-201ENST00000446690 LOC107984156A0A0G2JMH3 177 aa6.6□□□□□ -1.35
COL6A4P1-201ENST00000446690 PRB2P02812 416 aaPredicted RBP6.6□□□□□ -1.35
COL6A4P1-201ENST00000446690 C5orf38Q86SI9 138 aa6.6□□□□□ -1.35
COL6A4P1-201ENST00000446690 ARL17AQ8IVW1 177 aa6.6□□□□□ -1.35
COL6A4P1-201ENST00000446690 LINC00959A0A1B0GUT2 108 aa6.59□□□□□ -1.35
COL6A4P1-201ENST00000446690 H7C2G1 150 aa6.59□□□□□ -1.35
COL6A4P1-201ENST00000446690 XCL1P47992 114 aa6.59□□□□□ -1.35
COL6A4P1-201ENST00000446690 CIRBPQ14011 172 aaKnown RBP6.59□□□□□ -1.35
COL6A4P1-201ENST00000446690 MRPL23Q16540 153 aaKnown RBP6.59□□□□□ -1.35
COL6A4P1-201ENST00000446690 Q8N3U1 123 aa6.59□□□□□ -1.36
COL6A4P1-201ENST00000446690 PRO1854Q9UHT4 67 aa6.59□□□□□ -1.36
COL6A4P1-201ENST00000446690 A0A1B0GUV1 79 aa6.58□□□□□ -1.36
COL6A4P1-201ENST00000446690 SS18Q15532 418 aa6.58□□□□□ -1.36
COL6A4P1-201ENST00000446690 MIAQ16674 131 aa6.58□□□□□ -1.36
COL6A4P1-201ENST00000446690 MEIG1Q5JSS6 88 aa6.58□□□□□ -1.36
COL6A4P1-201ENST00000446690 LINC00269Q8N2A0 174 aa6.58□□□□□ -1.36
COL6A4P1-201ENST00000446690 ICOSQ9Y6W8 199 aa6.58□□□□□ -1.36
COL6A4P1-201ENST00000446690 STAB1Q9NY15 2570 aa6.58□□□□□ -1.36
COL6A4P1-201ENST00000446690 ANGP03950 147 aaKnown RBP6.58□□□□□ -1.36
COL6A4P1-201ENST00000446690 SPANXDQ9BXN6 97 aa6.58□□□□□ -1.36
COL6A4P1-201ENST00000446690 SPANXCQ9NY87 97 aa6.58□□□□□ -1.36
COL6A4P1-201ENST00000446690 IGHV3OR16-9A0A0B4J2B5 98 aa6.57□□□□□ -1.36
COL6A4P1-201ENST00000446690 TCL1BO95988 128 aa6.57□□□□□ -1.36
COL6A4P1-201ENST00000446690 NHLRC4P0CG21 123 aaPredicted RBP6.57□□□□□ -1.36
COL6A4P1-201ENST00000446690 LYRM7Q5U5X0 104 aa6.57□□□□□ -1.36
COL6A4P1-201ENST00000446690 COX7B2Q8TF08 81 aa6.57□□□□□ -1.36
COL6A4P1-201ENST00000446690 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.56□□□□□ -1.36
COL6A4P1-201ENST00000446690 A0A0J9YWU9 116 aa6.56□□□□□ -1.36
COL6A4P1-201ENST00000446690 B5MCH6 92 aa6.56□□□□□ -1.36
COL6A4P1-201ENST00000446690 ANKRD29Q8N6D5 301 aa6.56□□□□□ -1.36
COL6A4P1-201ENST00000446690 ANK2Q01484 3957 aa6.56□□□□□ -1.36
COL6A4P1-201ENST00000446690 IGLV10-54A0A075B6I4 117 aa6.56□□□□□ -1.36
COL6A4P1-201ENST00000446690 EIF4EBP3O60516 100 aaPredicted RBP6.56□□□□□ -1.36
COL6A4P1-201ENST00000446690 SCGB1C2P0DMR2 95 aa6.56□□□□□ -1.36
COL6A4P1-201ENST00000446690 Q1RN00 199 aa6.56□□□□□ -1.36
COL6A4P1-201ENST00000446690 CFAP161Q6P656 301 aa6.56□□□□□ -1.36
COL6A4P1-201ENST00000446690 Q6ZTC4 211 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms