RNA–Protein interactions for RNA: ENST00000445721.5

NUP50-211, Transcript of nucleoporin 50, humanhuman

TSL 5

Gene NUP50, Length 443 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-211ENST00000445721 HIGD1CA8MV81 97 aa13.98□□□□□ -0.17
NUP50-211ENST00000445721 ZNF861PO60384 105 aa13.98□□□□□ -0.17
NUP50-211ENST00000445721 RGS21Q2M5E4 152 aa13.98□□□□□ -0.17
NUP50-211ENST00000445721 CT83Q5H943 113 aa13.98□□□□□ -0.17
NUP50-211ENST00000445721 NRACQ8N912 160 aa13.98□□□□□ -0.17
NUP50-211ENST00000445721 PPP1R17O96001 155 aa13.96□□□□□ -0.17
NUP50-211ENST00000445721 RPL39P62891 51 aaKnown RBP13.95□□□□□ -0.18
NUP50-211ENST00000445721 FAM104AQ969W3 186 aa13.95□□□□□ -0.18
NUP50-211ENST00000445721 C9orf129Q5T035 196 aaKnown RBP13.94□□□□□ -0.18
NUP50-211ENST00000445721 A0A087X002 238 aa13.92□□□□□ -0.18
NUP50-211ENST00000445721 PPP1R2P9O14990 202 aa13.92□□□□□ -0.18
NUP50-211ENST00000445721 KIAA0087Q14695 138 aa13.92□□□□□ -0.18
NUP50-211ENST00000445721 IFITM10A6NMD0 228 aa13.91□□□□□ -0.18
NUP50-211ENST00000445721 NDUFC2-KCTD14E9PQ53 114 aa13.91□□□□□ -0.18
NUP50-211ENST00000445721 TYMSOSQ8TAI1 123 aa13.91□□□□□ -0.18
NUP50-211ENST00000445721 TRBV30A0A0K0K1B3 111 aa13.9□□□□□ -0.18
NUP50-211ENST00000445721 TMEM250H0YL14 139 aa13.9□□□□□ -0.18
NUP50-211ENST00000445721 CEBPGP53567 150 aa13.9□□□□□ -0.18
NUP50-211ENST00000445721 RIGQ13278 110 aa13.9□□□□□ -0.18
NUP50-211ENST00000445721 C2orf82Q6UX34 121 aa13.9□□□□□ -0.18
NUP50-211ENST00000445721 TGIF2-C20orf24A0A0A6YYL0 155 aa13.89□□□□□ -0.19
NUP50-211ENST00000445721 HBBP68871 147 aa13.89□□□□□ -0.19
NUP50-211ENST00000445721 BATF3Q9NR55 127 aa13.89□□□□□ -0.19
NUP50-211ENST00000445721 CRYGAP11844 174 aa13.88□□□□□ -0.19
NUP50-211ENST00000445721 PACRGQ96M98 296 aaPredicted RBP13.88□□□□□ -0.19
NUP50-211ENST00000445721 RETNLBQ9BQ08 111 aa13.88□□□□□ -0.19
NUP50-211ENST00000445721 CTDSP1Q9GZU7 261 aa13.88□□□□□ -0.19
NUP50-211ENST00000445721 SPANXA1Q9NS26 97 aa13.88□□□□□ -0.19
NUP50-211ENST00000445721 NUPR1O60356 82 aa13.87□□□□□ -0.19
NUP50-211ENST00000445721 MRPS36P82909 103 aaKnown RBP13.87□□□□□ -0.19
NUP50-211ENST00000445721 MRPL51Q4U2R6 128 aaKnown RBP13.87□□□□□ -0.19
NUP50-211ENST00000445721 C20orf78Q9BR46 151 aa13.86□□□□□ -0.19
NUP50-211ENST00000445721 CDIP1Q9H305 208 aa13.86□□□□□ -0.19
NUP50-211ENST00000445721 C22orf24Q9Y442 160 aa13.86□□□□□ -0.19
NUP50-211ENST00000445721 TCAPO15273 167 aa13.85□□□□□ -0.19
NUP50-211ENST00000445721 FAM104BQ5XKR9 115 aa13.84□□□□□ -0.19
NUP50-211ENST00000445721 OSTCQ9NRP0 149 aa13.84□□□□□ -0.19
NUP50-211ENST00000445721 LINC01551Q86U37 167 aa13.83□□□□□ -0.2
NUP50-211ENST00000445721 MUC17Q685J3 4493 aa13.83□□□□□ -0.2
NUP50-211ENST00000445721 RPL28P46779 137 aaKnown RBP13.82□□□□□ -0.2
NUP50-211ENST00000445721 RPL32P62910 135 aaKnown RBP13.82□□□□□ -0.2
NUP50-211ENST00000445721 LBHQ53QV2 105 aaPredicted RBP13.82□□□□□ -0.2
NUP50-211ENST00000445721 LINC00469Q8N7U9 141 aa13.82□□□□□ -0.2
NUP50-211ENST00000445721 SMIM7Q9BQ49 75 aa13.82□□□□□ -0.2
NUP50-211ENST00000445721 TRBV24-1A0A075B6N3 115 aa13.81□□□□□ -0.2
NUP50-211ENST00000445721 SLC51BQ86UW2 128 aa13.81□□□□□ -0.2
NUP50-211ENST00000445721 ANAPC11Q9NYG5 84 aa13.81□□□□□ -0.2
NUP50-211ENST00000445721 LINC00862A6NCI5 91 aa13.8□□□□□ -0.2
NUP50-211ENST00000445721 CKS2P33552 79 aa13.8□□□□□ -0.2
NUP50-211ENST00000445721 LINC00242Q5T6M2 205 aa13.8□□□□□ -0.2
NUP50-211ENST00000445721 SMIM2Q9BVW6 85 aa13.8□□□□□ -0.2
NUP50-211ENST00000445721 ZNF727A8MUV8 499 aa13.79□□□□□ -0.2
NUP50-211ENST00000445721 TNFRSF6BO95407 300 aa13.79□□□□□ -0.2
NUP50-211ENST00000445721 V9GYV3 84 aa13.79□□□□□ -0.2
NUP50-211ENST00000445721 TPRXLQ17RH7 258 aa13.78□□□□□ -0.2
NUP50-211ENST00000445721 XAGE1AQ9HD64 81 aa13.78□□□□□ -0.2
NUP50-211ENST00000445721 BCE1O60756 84 aa13.77□□□□□ -0.21
NUP50-211ENST00000445721 IGLV7-46A0A075B6I9 117 aa13.76□□□□□ -0.21
NUP50-211ENST00000445721 KRTAP13-2Q52LG2 175 aa13.76□□□□□ -0.21
NUP50-211ENST00000445721 NAT8BQ9UHF3 227 aa13.76□□□□□ -0.21
NUP50-211ENST00000445721 IFI27P40305 119 aaPredicted RBP13.75□□□□□ -0.21
NUP50-211ENST00000445721 PRSS2P07478 247 aa13.74□□□□□ -0.21
NUP50-211ENST00000445721 CKS1BP61024 79 aa13.74□□□□□ -0.21
NUP50-211ENST00000445721 MRPL55Q7Z7F7 128 aaKnown RBP13.74□□□□□ -0.21
NUP50-211ENST00000445721 LINC00304Q8N9R0 145 aa13.74□□□□□ -0.21
NUP50-211ENST00000445721 TOMM7Q9P0U1 55 aa13.74□□□□□ -0.21
NUP50-211ENST00000445721 LINC00173Q6ZV60 143 aa13.73□□□□□ -0.21
NUP50-211ENST00000445721 IGLV4-3A0A075B6K6 122 aa13.72□□□□□ -0.21
NUP50-211ENST00000445721 D6R8Y8 96 aa13.72□□□□□ -0.21
NUP50-211ENST00000445721 NPYP01303 97 aa13.72□□□□□ -0.21
NUP50-211ENST00000445721 BLOC1S1P78537 153 aa13.72□□□□□ -0.21
NUP50-211ENST00000445721 LINC01561Q8N1V8 128 aa13.72□□□□□ -0.21
NUP50-211ENST00000445721 TP73-AS1Q9UF72 201 aa13.72□□□□□ -0.21
NUP50-211ENST00000445721 C6orf226Q5I0X4 101 aa13.71□□□□□ -0.21
NUP50-211ENST00000445721 EIF5A2Q9GZV4 153 aaKnown RBP13.71□□□□□ -0.21
NUP50-211ENST00000445721 PYGO1Q9Y3Y4 419 aa13.71□□□□□ -0.21
NUP50-211ENST00000445721 FAM74A3Q4VXF1 159 aa13.7□□□□□ -0.22
NUP50-211ENST00000445721 TMEM141Q96I45 108 aa13.7□□□□□ -0.22
NUP50-211ENST00000445721 RPL37AP8A6NKH3 93 aa13.69□□□□□ -0.22
NUP50-211ENST00000445721 RAB5AP20339 215 aa13.69□□□□□ -0.22
NUP50-211ENST00000445721 Q6ZN92 141 aa13.69□□□□□ -0.22
NUP50-211ENST00000445721 TEX43Q6ZNM6 134 aa13.68□□□□□ -0.22
NUP50-211ENST00000445721 A0A1B0GW15 77 aa13.67□□□□□ -0.22
NUP50-211ENST00000445721 ALKAL2Q6UX46 152 aa13.67□□□□□ -0.22
NUP50-211ENST00000445721 LINC00167Q96N53 147 aa13.67□□□□□ -0.22
NUP50-211ENST00000445721 SMIM27A0A1W2PRY6 76 aa13.66□□□□□ -0.22
NUP50-211ENST00000445721 LCE2DQ5TA82 110 aaPredicted RBP13.66□□□□□ -0.22
NUP50-211ENST00000445721 ZC2HC1BQ5TFG8 222 aa13.66□□□□□ -0.22
NUP50-211ENST00000445721 ALKBH7Q9BT30 221 aaPredicted RBP13.66□□□□□ -0.22
NUP50-211ENST00000445721 FAM229BQ4G0N7 80 aa13.65□□□□□ -0.22
NUP50-211ENST00000445721 Q8IZM0 81 aa13.65□□□□□ -0.22
NUP50-211ENST00000445721 C2orf88Q9BSF0 95 aa13.65□□□□□ -0.22
NUP50-211ENST00000445721 GAGE10A6NGK3 116 aa13.64□□□□□ -0.23
NUP50-211ENST00000445721 SRP19P09132 144 aaKnown RBP13.64□□□□□ -0.23
NUP50-211ENST00000445721 UBE2AP49459 152 aa13.64□□□□□ -0.23
NUP50-211ENST00000445721 PPDPFQ9H3Y8 114 aa13.64□□□□□ -0.23
NUP50-211ENST00000445721 IGKV2D-26A0A0A0MRZ7 120 aa13.63□□□□□ -0.23
NUP50-211ENST00000445721 F8W036 122 aa13.63□□□□□ -0.23
NUP50-211ENST00000445721 TCTE3Q8IZS6 198 aa13.63□□□□□ -0.23
NUP50-211ENST00000445721 CRCT1Q9UGL9 99 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms