RNA–Protein interactions for RNA: ENST00000445497.1

UBBP3-201, Transcript of ubiquitin B pseudogene 3, humanhuman

BASIC

Gene UBBP3, Length 241 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP3-201ENST00000445497 CABIN1Q9Y6J0 2220 aa1.68□□□□□ -2.14
UBBP3-201ENST00000445497 KIAA1549LQ6ZVL6 1849 aa1.68□□□□□ -2.14
UBBP3-201ENST00000445497 LRP4O75096 1905 aa1.68□□□□□ -2.14
UBBP3-201ENST00000445497 SHPRHQ149N8 1683 aa1.68□□□□□ -2.14
UBBP3-201ENST00000445497 MUC22E2RYF6 1773 aaPredicted RBP1.68□□□□□ -2.14
UBBP3-201ENST00000445497 LOC110117498A0A087WWA1 95 aa1.68□□□□□ -2.14
UBBP3-201ENST00000445497 IGKV3OR2-268A0A0C4DH90 116 aa1.68□□□□□ -2.14
UBBP3-201ENST00000445497 A0A1W2PNN7 141 aa1.68□□□□□ -2.14
UBBP3-201ENST00000445497 IGKV3-20P01619 116 aa1.68□□□□□ -2.14
UBBP3-201ENST00000445497 ARL14EPLP0DKL9 152 aa1.68□□□□□ -2.14
UBBP3-201ENST00000445497 RNASE3P12724 160 aaKnown RBP1.68□□□□□ -2.14
UBBP3-201ENST00000445497 KRTAP15-1Q3LI76 137 aa1.68□□□□□ -2.14
UBBP3-201ENST00000445497 HEATR1Q9H583 2144 aaKnown RBP1.68□□□□□ -2.14
UBBP3-201ENST00000445497 R4GN34 69 aa1.68□□□□□ -2.14
UBBP3-201ENST00000445497 GBF1Q92538 1859 aa1.68□□□□□ -2.14
UBBP3-201ENST00000445497 KIAA0100Q14667 2235 aaKnown RBP1.68□□□□□ -2.14
UBBP3-201ENST00000445497 COL11A1P12107 1806 aaPredicted RBP1.68□□□□□ -2.14
UBBP3-201ENST00000445497 TUBGCP6Q96RT7 1819 aa1.68□□□□□ -2.14
UBBP3-201ENST00000445497 SPAG17Q6Q759 2223 aa1.67□□□□□ -2.14
UBBP3-201ENST00000445497 MYO16Q9Y6X6 1858 aa1.67□□□□□ -2.14
UBBP3-201ENST00000445497 NACAE9PAV3 2078 aa1.67□□□□□ -2.14
UBBP3-201ENST00000445497 NINQ8N4C6 2090 aa1.67□□□□□ -2.14
UBBP3-201ENST00000445497 DDX60LQ5H9U9 1706 aaKnown RBP1.67□□□□□ -2.14
UBBP3-201ENST00000445497 PIN1P1O15428 100 aa1.67□□□□□ -2.14
UBBP3-201ENST00000445497 ZNF861PO60384 105 aa1.67□□□□□ -2.14
UBBP3-201ENST00000445497 MRPL33O75394 65 aaKnown RBP1.67□□□□□ -2.14
UBBP3-201ENST00000445497 IGLV3-1P01715 115 aa1.67□□□□□ -2.14
UBBP3-201ENST00000445497 IGKV2-30P06310 120 aa1.67□□□□□ -2.14
UBBP3-201ENST00000445497 RPL38P63173 70 aaKnown RBP1.67□□□□□ -2.14
UBBP3-201ENST00000445497 DEFB112Q30KQ8 113 aa1.67□□□□□ -2.14
UBBP3-201ENST00000445497 ZNF625Q96I27 306 aaPredicted RBP1.67□□□□□ -2.14
UBBP3-201ENST00000445497 TIMM8BQ9Y5J9 83 aaPredicted RBP1.67□□□□□ -2.14
UBBP3-201ENST00000445497 PTPRSQ13332 1948 aa1.67□□□□□ -2.14
UBBP3-201ENST00000445497 DIDO1Q9BTC0 2240 aaKnown RBP1.67□□□□□ -2.14
UBBP3-201ENST00000445497 SCN7AQ01118 1682 aa1.67□□□□□ -2.14
UBBP3-201ENST00000445497 PAPPA2Q9BXP8 1791 aa1.67□□□□□ -2.14
UBBP3-201ENST00000445497 BAZ2BQ9UIF8 2168 aaKnown RBP1.66□□□□□ -2.14
UBBP3-201ENST00000445497 LY75O60449 1722 aa1.66□□□□□ -2.14
UBBP3-201ENST00000445497 ETDCA0A1B0GVM5 59 aa1.66□□□□□ -2.14
UBBP3-201ENST00000445497 NDUFA4O00483 81 aa1.66□□□□□ -2.14
UBBP3-201ENST00000445497 NDUFA3O95167 84 aa1.66□□□□□ -2.14
UBBP3-201ENST00000445497 SPINK7P58062 85 aa1.66□□□□□ -2.14
UBBP3-201ENST00000445497 FXYD3Q14802 87 aa1.66□□□□□ -2.14
UBBP3-201ENST00000445497 E9PCH4 1651 aa1.66□□□□□ -2.14
UBBP3-201ENST00000445497 PCSK5Q92824 1860 aa1.66□□□□□ -2.14
UBBP3-201ENST00000445497 PRRC2BQ5JSZ5 2229 aaKnown RBP1.66□□□□□ -2.14
UBBP3-201ENST00000445497 SIP14410 1827 aa1.66□□□□□ -2.14
UBBP3-201ENST00000445497 LAMA4Q16363 1823 aa1.66□□□□□ -2.14
UBBP3-201ENST00000445497 ZNF236Q9UL36 1845 aa1.66□□□□□ -2.14
UBBP3-201ENST00000445497 INTS1Q8N201 2190 aaKnown RBP1.65□□□□□ -2.14
UBBP3-201ENST00000445497 HEATR5BQ9P2D3 2071 aa1.65□□□□□ -2.14
UBBP3-201ENST00000445497 KIAA1549Q9HCM3 1950 aa1.65□□□□□ -2.14
UBBP3-201ENST00000445497 MYO7AQ13402 2215 aa1.65□□□□□ -2.15
UBBP3-201ENST00000445497 TRGV2A0A075B6R0 118 aa1.65□□□□□ -2.15
UBBP3-201ENST00000445497 HAMPP81172 84 aa1.65□□□□□ -2.15
UBBP3-201ENST00000445497 KCNQ1DNQ9H478 68 aa1.65□□□□□ -2.15
UBBP3-201ENST00000445497 CCL26Q9Y258 94 aa1.65□□□□□ -2.15
UBBP3-201ENST00000445497 DDX60Q8IY21 1712 aaKnown RBP1.65□□□□□ -2.15
UBBP3-201ENST00000445497 MALRD1Q5VYJ5 2156 aa1.65□□□□□ -2.15
UBBP3-201ENST00000445497 MYOFQ9NZM1 2061 aa1.65□□□□□ -2.15
UBBP3-201ENST00000445497 CUL9Q8IWT3 2517 aa1.65□□□□□ -2.15
UBBP3-201ENST00000445497 SPTBP11277 2137 aa1.64□□□□□ -2.15
UBBP3-201ENST00000445497 PI4KAP42356 2102 aa1.64□□□□□ -2.15
UBBP3-201ENST00000445497 SDK2Q58EX2 2172 aa1.64□□□□□ -2.15
UBBP3-201ENST00000445497 A0A087WTM6 91 aa1.64□□□□□ -2.15
UBBP3-201ENST00000445497 TRGV1A0A0A0MS02 117 aa1.64□□□□□ -2.15
UBBP3-201ENST00000445497 NCR3O14931 201 aa1.64□□□□□ -2.15
UBBP3-201ENST00000445497 RPL37AP61513 92 aaKnown RBP1.64□□□□□ -2.15
UBBP3-201ENST00000445497 EML5Q05BV3 1969 aa1.64□□□□□ -2.15
UBBP3-201ENST00000445497 UBR3Q6ZT12 1888 aa1.64□□□□□ -2.15
UBBP3-201ENST00000445497 ANKRD36A6QL64 1941 aa1.64□□□□□ -2.15
UBBP3-201ENST00000445497 TIAM2Q8IVF5 1701 aa1.63□□□□□ -2.15
UBBP3-201ENST00000445497 PARP4Q9UKK3 1724 aaKnown RBP1.63□□□□□ -2.15
UBBP3-201ENST00000445497 A0A0G2JQZ4 141 aa1.63□□□□□ -2.15
UBBP3-201ENST00000445497 NBDYA0A0U1RRE5 68 aa1.63□□□□□ -2.15
UBBP3-201ENST00000445497 COX7BP24311 80 aa1.63□□□□□ -2.15
UBBP3-201ENST00000445497 C10orf55Q5SWW7 151 aa1.63□□□□□ -2.15
UBBP3-201ENST00000445497 XP32Q5T750 250 aa1.63□□□□□ -2.15
UBBP3-201ENST00000445497 COA5Q86WW8 74 aa1.63□□□□□ -2.15
UBBP3-201ENST00000445497 MPDZO75970 2070 aa1.63□□□□□ -2.15
UBBP3-201ENST00000445497 LMO7Q8WWI1 1683 aa1.62□□□□□ -2.15
UBBP3-201ENST00000445497 TCF20Q9UGU0 1960 aaKnown RBP1.62□□□□□ -2.15
UBBP3-201ENST00000445497 A0A1B0GU69 56 aa1.62□□□□□ -2.15
UBBP3-201ENST00000445497 INE1O15225 51 aa1.62□□□□□ -2.15
UBBP3-201ENST00000445497 IGKV3-15P01624 115 aa1.62□□□□□ -2.15
UBBP3-201ENST00000445497 IGLV3-19P01714 112 aa1.62□□□□□ -2.15
UBBP3-201ENST00000445497 HRES1P13985 223 aa1.62□□□□□ -2.15
UBBP3-201ENST00000445497 DEFB134Q4QY38 66 aa1.62□□□□□ -2.15
UBBP3-201ENST00000445497 ABCA7Q8IZY2 2146 aa1.62□□□□□ -2.15
UBBP3-201ENST00000445497 C5orf56Q8N8D9 126 aa1.62□□□□□ -2.15
UBBP3-201ENST00000445497 SMIM2Q9BVW6 85 aa1.62□□□□□ -2.15
UBBP3-201ENST00000445497 LINC00472Q9H8W2 130 aa1.62□□□□□ -2.15
UBBP3-201ENST00000445497 NRXN2Q9P2S2 1712 aa1.62□□□□□ -2.15
UBBP3-201ENST00000445497 ZGRF1Q86YA3 2104 aa1.61□□□□□ -2.15
UBBP3-201ENST00000445497 DOT1LQ8TEK3 1739 aa1.61□□□□□ -2.15
UBBP3-201ENST00000445497 TOGARAM1Q9Y4F4 1720 aa1.61□□□□□ -2.15
UBBP3-201ENST00000445497 IGLV4-60A0A075B6I1 120 aa1.61□□□□□ -2.15
UBBP3-201ENST00000445497 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.61□□□□□ -2.15
UBBP3-201ENST00000445497 IGKV2D-30A0A075B6S6 120 aa1.61□□□□□ -2.15
UBBP3-201ENST00000445497 DEFB131BA0A096LNP1 70 aa1.61□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 113.8 ms