RNA–Protein interactions for RNA: ENST00000444942.1

LINC00642-203, long intergenic non-protein coding RNA 642, humanhuman

TSL 1 (best)

Gene LINC00642, Length 1,376 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00642-203ENST00000444942 NPSP0C0P6 89 aa6.33□□□□□ -1.4
LINC00642-203ENST00000444942 HSD52Q0P140 79 aa6.33□□□□□ -1.4
LINC00642-203ENST00000444942 GAGE1Q13065 139 aa6.33□□□□□ -1.4
LINC00642-203ENST00000444942 GAGE4Q13068 117 aa6.33□□□□□ -1.4
LINC00642-203ENST00000444942 GAGE5Q13069 117 aa6.33□□□□□ -1.4
LINC00642-203ENST00000444942 GAGE13Q4V321 117 aa6.33□□□□□ -1.4
LINC00642-203ENST00000444942 MPV17L2Q567V2 206 aa6.33□□□□□ -1.4
LINC00642-203ENST00000444942 LYPD5Q6UWN5 251 aa6.33□□□□□ -1.4
LINC00642-203ENST00000444942 PCP2Q8IVA1 136 aa6.33□□□□□ -1.4
LINC00642-203ENST00000444942 PRADC1Q9BSG0 188 aa6.33□□□□□ -1.4
LINC00642-203ENST00000444942 CST9LQ9H4G1 147 aa6.33□□□□□ -1.4
LINC00642-203ENST00000444942 Q9H8V8 135 aa6.33□□□□□ -1.4
LINC00642-203ENST00000444942 Q9UF83 564 aa6.33□□□□□ -1.4
LINC00642-203ENST00000444942 IGLV4-69A0A075B6H9 119 aa6.32□□□□□ -1.4
LINC00642-203ENST00000444942 XGP55808 180 aa6.32□□□□□ -1.4
LINC00642-203ENST00000444942 BVES-AS1Q5T3Y7 98 aa6.32□□□□□ -1.4
LINC00642-203ENST00000444942 SPANXA1Q9NS26 97 aa6.32□□□□□ -1.4
LINC00642-203ENST00000444942 PYGO1Q9Y3Y4 419 aa6.32□□□□□ -1.4
LINC00642-203ENST00000444942 IGLV4-3A0A075B6K6 122 aa6.31□□□□□ -1.4
LINC00642-203ENST00000444942 TRBV7-3A0A075B6L6 115 aa6.31□□□□□ -1.4
LINC00642-203ENST00000444942 IGHV3-38A0A0C4DH36 116 aa6.31□□□□□ -1.4
LINC00642-203ENST00000444942 C11orf86A6NJI1 115 aa6.31□□□□□ -1.4
LINC00642-203ENST00000444942 E9PLD3 99 aa6.31□□□□□ -1.4
LINC00642-203ENST00000444942 CHCHD7Q9BUK0 85 aa6.31□□□□□ -1.4
LINC00642-203ENST00000444942 CHAC1Q9BUX1 264 aa6.31□□□□□ -1.4
LINC00642-203ENST00000444942 VCX2Q9H322 139 aa6.31□□□□□ -1.4
LINC00642-203ENST00000444942 HIGD1BQ9P298 99 aa6.31□□□□□ -1.4
LINC00642-203ENST00000444942 TRAV8-6A0A0B4J262 113 aa6.31□□□□□ -1.4
LINC00642-203ENST00000444942 NBDYA0A0U1RRE5 68 aa6.31□□□□□ -1.4
LINC00642-203ENST00000444942 TRBV6-4A0A1B0GX49 114 aa6.31□□□□□ -1.4
LINC00642-203ENST00000444942 SMAGPQ0VAQ4 97 aa6.31□□□□□ -1.4
LINC00642-203ENST00000444942 DAZ4Q86SG3 579 aaKnown RBP6.31□□□□□ -1.4
LINC00642-203ENST00000444942 NFE4Q86UQ8 179 aa6.31□□□□□ -1.4
LINC00642-203ENST00000444942 DAZ3Q9NR90 486 aaKnown RBP6.31□□□□□ -1.4
LINC00642-203ENST00000444942 LRP2P98164 4655 aa6.3□□□□□ -1.4
LINC00642-203ENST00000444942 LRP1Q07954 4544 aaKnown RBP6.3□□□□□ -1.4
LINC00642-203ENST00000444942 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.3□□□□□ -1.4
LINC00642-203ENST00000444942 IGKV2-29A2NJV5 120 aaPredicted RBP6.3□□□□□ -1.4
LINC00642-203ENST00000444942 ZNF25P17030 456 aaPredicted RBP6.3□□□□□ -1.4
LINC00642-203ENST00000444942 KRTAP10-2P60368 255 aa6.3□□□□□ -1.4
LINC00642-203ENST00000444942 UBE2D3P61077 147 aa6.3□□□□□ -1.4
LINC00642-203ENST00000444942 UBE2D2P62837 147 aa6.3□□□□□ -1.4
LINC00642-203ENST00000444942 SEC11AP67812 179 aa6.3□□□□□ -1.4
LINC00642-203ENST00000444942 TMEM170BQ5T4T1 132 aa6.3□□□□□ -1.4
LINC00642-203ENST00000444942 WFDC10BQ8IUB3 73 aa6.3□□□□□ -1.4
LINC00642-203ENST00000444942 ATP6V0E2Q8NHE4 81 aa6.3□□□□□ -1.4
LINC00642-203ENST00000444942 OPRPNQ99935 248 aaPredicted RBP6.3□□□□□ -1.4
LINC00642-203ENST00000444942 TTTY13Q9BZ97 58 aa6.3□□□□□ -1.4
LINC00642-203ENST00000444942 UBE2D4Q9Y2X8 147 aa6.3□□□□□ -1.4
LINC00642-203ENST00000444942 TRBV25-1A0A075B6N4 114 aa6.29□□□□□ -1.4
LINC00642-203ENST00000444942 MYMXA0A1B0GTQ4 84 aa6.29□□□□□ -1.4
LINC00642-203ENST00000444942 A6NDN8 102 aa6.29□□□□□ -1.4
LINC00642-203ENST00000444942 ORAOV1Q8WV07 137 aa6.29□□□□□ -1.4
LINC00642-203ENST00000444942 AMELXQ99217 191 aa6.29□□□□□ -1.4
LINC00642-203ENST00000444942 UPK3BQ9BT76 320 aa6.29□□□□□ -1.4
LINC00642-203ENST00000444942 TIMM21Q9BVV7 248 aa6.29□□□□□ -1.4
LINC00642-203ENST00000444942 KRTAP1-5Q9BYS1 174 aa6.29□□□□□ -1.4
LINC00642-203ENST00000444942 MRPS36P82909 103 aaKnown RBP6.28□□□□□ -1.4
LINC00642-203ENST00000444942 DGAT2L7PQ6IED9 249 aa6.28□□□□□ -1.4
LINC00642-203ENST00000444942 A0A0J9YXV3 536 aa6.27□□□□□ -1.41
LINC00642-203ENST00000444942 ZNF815PA8K554 130 aa6.27□□□□□ -1.41
LINC00642-203ENST00000444942 FAM229AH3BQW9 127 aa6.27□□□□□ -1.41
LINC00642-203ENST00000444942 IGHV3-30P01768 117 aa6.27□□□□□ -1.41
LINC00642-203ENST00000444942 IGHV3-33P01772 117 aa6.27□□□□□ -1.41
LINC00642-203ENST00000444942 IGHV3-30-3P0DP02 117 aa6.27□□□□□ -1.41
LINC00642-203ENST00000444942 IGHV3-30-5P0DP03 117 aa6.27□□□□□ -1.41
LINC00642-203ENST00000444942 ZNF22P17026 224 aaPredicted RBP6.27□□□□□ -1.41
LINC00642-203ENST00000444942 TAL2Q16559 108 aa6.27□□□□□ -1.41
LINC00642-203ENST00000444942 Q6ZUT4 128 aa6.27□□□□□ -1.41
LINC00642-203ENST00000444942 SH2D6Q7Z4S9 175 aa6.27□□□□□ -1.41
LINC00642-203ENST00000444942 C6orf223Q8N319 242 aa6.27□□□□□ -1.41
LINC00642-203ENST00000444942 GTSF1LQ9H1H1 148 aa6.27□□□□□ -1.41
LINC00642-203ENST00000444942 COX11Q9Y6N1 276 aa6.27□□□□□ -1.41
LINC00642-203ENST00000444942 TMEM223A0PJW6 202 aa6.26□□□□□ -1.41
LINC00642-203ENST00000444942 UBE2L6O14933 153 aa6.26□□□□□ -1.41
LINC00642-203ENST00000444942 LEPROTO15243 131 aa6.26□□□□□ -1.41
LINC00642-203ENST00000444942 SMR3BP02814 79 aaPredicted RBP6.26□□□□□ -1.41
LINC00642-203ENST00000444942 LGALS3P17931 250 aaKnown RBP6.26□□□□□ -1.41
LINC00642-203ENST00000444942 GCSHP23434 173 aa6.26□□□□□ -1.41
LINC00642-203ENST00000444942 TTC32Q5I0X7 151 aa6.26□□□□□ -1.41
LINC00642-203ENST00000444942 Q8N3U1 123 aa6.26□□□□□ -1.41
LINC00642-203ENST00000444942 PLEKHB2Q96CS7 222 aa6.26□□□□□ -1.41
LINC00642-203ENST00000444942 TMEM243Q9BU79 118 aa6.26□□□□□ -1.41
LINC00642-203ENST00000444942 TINCRA0A1B0GVN0 87 aa6.25□□□□□ -1.41
LINC00642-203ENST00000444942 TAX1BP3O14907 124 aa6.25□□□□□ -1.41
LINC00642-203ENST00000444942 LINC00694P0DN24 101 aa6.25□□□□□ -1.41
LINC00642-203ENST00000444942 RNASE13Q5GAN3 156 aaKnown RBP6.25□□□□□ -1.41
LINC00642-203ENST00000444942 AMMECR1LQ6DCA0 310 aa6.25□□□□□ -1.41
LINC00642-203ENST00000444942 SCGB1D4Q6XE38 83 aa6.25□□□□□ -1.41
LINC00642-203ENST00000444942 NTM-AS1Q6ZSK4 140 aa6.25□□□□□ -1.41
LINC00642-203ENST00000444942 FAM104AQ969W3 186 aa6.25□□□□□ -1.41
LINC00642-203ENST00000444942 HIST1H4GQ99525 98 aa6.25□□□□□ -1.41
LINC00642-203ENST00000444942 H7C423 109 aa6.24□□□□□ -1.41
LINC00642-203ENST00000444942 J3QQQ9 107 aa6.24□□□□□ -1.41
LINC00642-203ENST00000444942 PTTG1IPP53801 180 aa6.24□□□□□ -1.41
LINC00642-203ENST00000444942 LELP1Q5T871 98 aa6.24□□□□□ -1.41
LINC00642-203ENST00000444942 CEND1Q8N111 149 aa6.24□□□□□ -1.41
LINC00642-203ENST00000444942 OR5A1Q8NGJ0 315 aa6.24□□□□□ -1.41
LINC00642-203ENST00000444942 TMEM101Q96IK0 257 aa6.24□□□□□ -1.41
LINC00642-203ENST00000444942 GEMIN7Q9H840 131 aaKnown RBP6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms