RNA–Protein interactions for RNA: ENST00000444177.1

TREX1-202, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,200 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-202ENST00000444177 KRTAP29-1A8MX34 341 aaPredicted RBP9.01□□□□□ -0.97
TREX1-202ENST00000444177 KRTAP10-4P60372 401 aaPredicted RBP9.01□□□□□ -0.97
TREX1-202ENST00000444177 C2orf66Q6UXQ4 117 aa9.01□□□□□ -0.97
TREX1-202ENST00000444177 FA2HQ7L5A8 372 aa9.01□□□□□ -0.97
TREX1-202ENST00000444177 IGHV3-64A0A075B6Q5 118 aa9□□□□□ -0.97
TREX1-202ENST00000444177 TRAV13-1A0A0B4J241 112 aa9□□□□□ -0.97
TREX1-202ENST00000444177 SLPIP03973 132 aa9□□□□□ -0.97
TREX1-202ENST00000444177 RAB5BP61020 215 aa9□□□□□ -0.97
TREX1-202ENST00000444177 LRP1Q07954 4544 aaKnown RBP8.99□□□□□ -0.97
TREX1-202ENST00000444177 GVQW2A0A096LPI5 108 aaPredicted RBP8.99□□□□□ -0.97
TREX1-202ENST00000444177 IGHV1-58A0A0C4DH39 117 aa8.99□□□□□ -0.97
TREX1-202ENST00000444177 CD164L2Q6UWJ8 174 aa8.99□□□□□ -0.97
TREX1-202ENST00000444177 TOMM6Q96B49 74 aa8.99□□□□□ -0.97
TREX1-202ENST00000444177 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.99□□□□□ -0.97
TREX1-202ENST00000444177 ATP6V1G1O75348 118 aa8.98□□□□□ -0.97
TREX1-202ENST00000444177 SCO1O75880 301 aa8.98□□□□□ -0.97
TREX1-202ENST00000444177 TRGC2P03986 189 aa8.98□□□□□ -0.97
TREX1-202ENST00000444177 LINC00614P0C842 121 aa8.98□□□□□ -0.97
TREX1-202ENST00000444177 SDIM1Q6ZPB5 146 aa8.98□□□□□ -0.97
TREX1-202ENST00000444177 FAM104AQ969W3 186 aa8.98□□□□□ -0.97
TREX1-202ENST00000444177 TIMM17AQ99595 171 aa8.98□□□□□ -0.97
TREX1-202ENST00000444177 IGIPA6NJ69 53 aa8.97□□□□□ -0.97
TREX1-202ENST00000444177 C1orf196B1AJZ1 125 aa8.97□□□□□ -0.97
TREX1-202ENST00000444177 MALP21145 153 aa8.97□□□□□ -0.97
TREX1-202ENST00000444177 PAPPA-AS1Q5QFB9 102 aa8.97□□□□□ -0.97
TREX1-202ENST00000444177 TMEM141Q96I45 108 aa8.97□□□□□ -0.97
TREX1-202ENST00000444177 IGLV4-3A0A075B6K6 122 aa8.96□□□□□ -0.98
TREX1-202ENST00000444177 PANO1I0J062 215 aa8.96□□□□□ -0.98
TREX1-202ENST00000444177 COX7A2LO14548 114 aa8.96□□□□□ -0.98
TREX1-202ENST00000444177 ERASQ7Z444 233 aa8.96□□□□□ -0.98
TREX1-202ENST00000444177 CHCHD1Q96BP2 118 aaKnown RBP8.96□□□□□ -0.98
TREX1-202ENST00000444177 LINC00526Q96FQ7 95 aa8.96□□□□□ -0.98
TREX1-202ENST00000444177 URB1-AS1Q96HZ7 61 aa8.96□□□□□ -0.98
TREX1-202ENST00000444177 IFITM10A6NMD0 228 aa8.95□□□□□ -0.98
TREX1-202ENST00000444177 CHTF8P0CG12 524 aa8.95□□□□□ -0.98
TREX1-202ENST00000444177 Q6ZN92 141 aa8.95□□□□□ -0.98
TREX1-202ENST00000444177 OPRPNQ99935 248 aaPredicted RBP8.95□□□□□ -0.98
TREX1-202ENST00000444177 ZNF561-AS1K7EIQ3 104 aa8.94□□□□□ -0.98
TREX1-202ENST00000444177 TEX43Q6ZNM6 134 aa8.94□□□□□ -0.98
TREX1-202ENST00000444177 C5orf38Q86SI9 138 aa8.94□□□□□ -0.98
TREX1-202ENST00000444177 AMELXQ99217 191 aa8.94□□□□□ -0.98
TREX1-202ENST00000444177 HBDP02042 147 aa8.93□□□□□ -0.98
TREX1-202ENST00000444177 RPL37AP61513 92 aaKnown RBP8.93□□□□□ -0.98
TREX1-202ENST00000444177 COX6A2Q02221 97 aa8.93□□□□□ -0.98
TREX1-202ENST00000444177 DPH3Q96FX2 82 aa8.93□□□□□ -0.98
TREX1-202ENST00000444177 CARD19Q96LW7 228 aa8.93□□□□□ -0.98
TREX1-202ENST00000444177 SCGB3A1Q96QR1 104 aa8.93□□□□□ -0.98
TREX1-202ENST00000444177 C2orf88Q9BSF0 95 aa8.93□□□□□ -0.98
TREX1-202ENST00000444177 FAT3Q8TDW7 4589 aa8.92□□□□□ -0.98
TREX1-202ENST00000444177 A0A096LNJ9 63 aa8.92□□□□□ -0.98
TREX1-202ENST00000444177 OXTP01178 125 aa8.92□□□□□ -0.98
TREX1-202ENST00000444177 CIRBPQ14011 172 aaKnown RBP8.92□□□□□ -0.98
TREX1-202ENST00000444177 FAM19A3Q7Z5A8 133 aa8.92□□□□□ -0.98
TREX1-202ENST00000444177 SPACA4Q8TDM5 124 aa8.92□□□□□ -0.98
TREX1-202ENST00000444177 VCX2Q9H322 139 aa8.92□□□□□ -0.98
TREX1-202ENST00000444177 IGLV4-69A0A075B6H9 119 aa8.91□□□□□ -0.98
TREX1-202ENST00000444177 IGKV2-24A0A0C4DH68 120 aa8.91□□□□□ -0.98
TREX1-202ENST00000444177 APOMO95445 188 aa8.91□□□□□ -0.98
TREX1-202ENST00000444177 BAGE3Q86Y29 109 aa8.91□□□□□ -0.98
TREX1-202ENST00000444177 A0A087WYN8 130 aa8.9□□□□□ -0.98
TREX1-202ENST00000444177 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.9□□□□□ -0.98
TREX1-202ENST00000444177 SPAG11BQ08648 103 aa8.9□□□□□ -0.98
TREX1-202ENST00000444177 SYCNQ0VAF6 134 aa8.9□□□□□ -0.98
TREX1-202ENST00000444177 PDZD11Q5EBL8 140 aa8.9□□□□□ -0.98
TREX1-202ENST00000444177 LINC00173Q6ZV60 143 aa8.9□□□□□ -0.98
TREX1-202ENST00000444177 PKIGQ9Y2B9 76 aa8.9□□□□□ -0.98
TREX1-202ENST00000444177 UBE2D1P51668 147 aa8.89□□□□□ -0.99
TREX1-202ENST00000444177 SEC11AP67812 179 aa8.89□□□□□ -0.99
TREX1-202ENST00000444177 MAJINQ3KP22 176 aa8.89□□□□□ -0.99
TREX1-202ENST00000444177 CAMK2N2Q96S95 79 aa8.89□□□□□ -0.99
TREX1-202ENST00000444177 A0A096LNI7 61 aa8.88□□□□□ -0.99
TREX1-202ENST00000444177 IGHV3OR16-9A0A0B4J2B5 98 aa8.88□□□□□ -0.99
TREX1-202ENST00000444177 HSBP1O75506 76 aa8.88□□□□□ -0.99
TREX1-202ENST00000444177 ATP5LO75964 103 aa8.88□□□□□ -0.99
TREX1-202ENST00000444177 HNRNPA3P51991 378 aaKnown RBP8.88□□□□□ -0.99
TREX1-202ENST00000444177 LINC00242Q5T6M2 205 aa8.88□□□□□ -0.99
TREX1-202ENST00000444177 Q6ZRU5 148 aa8.88□□□□□ -0.99
TREX1-202ENST00000444177 ORAOV1Q8WV07 137 aa8.88□□□□□ -0.99
TREX1-202ENST00000444177 ZC2HC1BQ5TFG8 222 aa8.87□□□□□ -0.99
TREX1-202ENST00000444177 LINC01561Q8N1V8 128 aa8.87□□□□□ -0.99
TREX1-202ENST00000444177 OR10D4PQ8NGN7 298 aa8.87□□□□□ -0.99
TREX1-202ENST00000444177 PKHD1L1Q86WI1 4243 aa8.86□□□□□ -0.99
TREX1-202ENST00000444177 HIST1H2BKO60814 126 aa8.86□□□□□ -0.99
TREX1-202ENST00000444177 SERF1AO75920 110 aa8.86□□□□□ -0.99
TREX1-202ENST00000444177 HIST1H2BJP06899 126 aa8.86□□□□□ -0.99
TREX1-202ENST00000444177 HIST1H2BOP23527 126 aa8.86□□□□□ -0.99
TREX1-202ENST00000444177 HIST1H2BBP33778 126 aa8.86□□□□□ -0.99
TREX1-202ENST00000444177 HIST1H2BDP58876 126 aa8.86□□□□□ -0.99
TREX1-202ENST00000444177 HIST1H2BCP62807 126 aa8.86□□□□□ -0.99
TREX1-202ENST00000444177 PMVKQ15126 192 aa8.86□□□□□ -0.99
TREX1-202ENST00000444177 PMCHL1Q16048 86 aa8.86□□□□□ -0.99
TREX1-202ENST00000444177 HIST2H2BEQ16778 126 aa8.86□□□□□ -0.99
TREX1-202ENST00000444177 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.86□□□□□ -0.99
TREX1-202ENST00000444177 SERTAD4-AS1Q5TG53 156 aa8.86□□□□□ -0.99
TREX1-202ENST00000444177 STPG4Q8N801 248 aa8.86□□□□□ -0.99
TREX1-202ENST00000444177 HIST1H2BHQ93079 126 aa8.86□□□□□ -0.99
TREX1-202ENST00000444177 C2orf48Q96LS8 159 aa8.86□□□□□ -0.99
TREX1-202ENST00000444177 HIST1H2BNQ99877 126 aa8.86□□□□□ -0.99
TREX1-202ENST00000444177 HIST1H2BMQ99879 126 aa8.86□□□□□ -0.99
TREX1-202ENST00000444177 PLAC8Q9NZF1 115 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms