RNA–Protein interactions for RNA: ENST00000443617.6

HERC1-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC1, Length 15,137 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-201ENST00000443617 SIRPDQ9H106 197 aa3.63□□□□□ -1.83
HERC1-201ENST00000443617 JMJD7-PLA2G4BH0Y9G9 81 aa3.63□□□□□ -1.83
HERC1-201ENST00000443617 LINC01561Q8N1V8 128 aa3.63□□□□□ -1.83
HERC1-201ENST00000443617 DEFB131AP59861 70 aa3.63□□□□□ -1.83
HERC1-201ENST00000443617 ATP5EP56381 51 aaPredicted RBP3.63□□□□□ -1.83
HERC1-201ENST00000443617 ITPR1Q14643 2758 aa3.63□□□□□ -1.83
HERC1-201ENST00000443617 H3BQ85 93 aa3.63□□□□□ -1.83
HERC1-201ENST00000443617 BRD3OSQ6XYD6 125 aa3.63□□□□□ -1.83
HERC1-201ENST00000443617 IBA57-AS1B1ANH7 110 aa3.63□□□□□ -1.83
HERC1-201ENST00000443617 CYSTM1Q9H1C7 97 aa3.62□□□□□ -1.83
HERC1-201ENST00000443617 Q5XG85 94 aa3.62□□□□□ -1.83
HERC1-201ENST00000443617 TRIOO75962 3097 aa3.62□□□□□ -1.83
HERC1-201ENST00000443617 GRNP28799 593 aaKnown RBP3.62□□□□□ -1.83
HERC1-201ENST00000443617 TRGV2A0A075B6R0 118 aa3.62□□□□□ -1.83
HERC1-201ENST00000443617 C1orf195Q5TG92 126 aa3.62□□□□□ -1.83
HERC1-201ENST00000443617 FUSP35637 526 aaKnown RBP eCLIP3.62□□□□□ -1.83
HERC1-201ENST00000443617 LINC00336Q6ZUF6 198 aa3.62□□□□□ -1.83
HERC1-201ENST00000443617 BCE1O60756 84 aa3.62□□□□□ -1.83
HERC1-201ENST00000443617 PRM2P04554 102 aa3.62□□□□□ -1.83
HERC1-201ENST00000443617 BLCAPP62952 87 aa3.62□□□□□ -1.83
HERC1-201ENST00000443617 GCN1Q92616 2671 aaKnown RBP3.62□□□□□ -1.83
HERC1-201ENST00000443617 Q8N814 137 aa3.62□□□□□ -1.83
HERC1-201ENST00000443617 F8WDY8 70 aa3.62□□□□□ -1.83
HERC1-201ENST00000443617 BEAN1Q3B7T3 259 aa3.62□□□□□ -1.83
HERC1-201ENST00000443617 SMIM1B2RUZ4 78 aa3.62□□□□□ -1.83
HERC1-201ENST00000443617 FHL2Q14192 279 aa3.61□□□□□ -1.83
HERC1-201ENST00000443617 MIFP14174 115 aa3.61□□□□□ -1.83
HERC1-201ENST00000443617 TRBV7-6A0A0J9YX20 115 aa3.61□□□□□ -1.83
HERC1-201ENST00000443617 FAM104AQ969W3 186 aa3.61□□□□□ -1.83
HERC1-201ENST00000443617 C5orf42Q9H799 3197 aa3.61□□□□□ -1.83
HERC1-201ENST00000443617 CFAP46Q8IYW2 2715 aa3.61□□□□□ -1.83
HERC1-201ENST00000443617 TRBV10-3A0A0K0K1G6 114 aa3.61□□□□□ -1.83
HERC1-201ENST00000443617 K7EQG2 157 aa3.61□□□□□ -1.83
HERC1-201ENST00000443617 H3BUX3 64 aa3.61□□□□□ -1.83
HERC1-201ENST00000443617 BPESC1Q9GZL8 116 aa3.61□□□□□ -1.83
HERC1-201ENST00000443617 TRBV10-1A0A0K0K1A3 114 aa3.61□□□□□ -1.83
HERC1-201ENST00000443617 VPS13AQ96RL7 3174 aa3.6□□□□□ -1.83
HERC1-201ENST00000443617 K7EQD1 137 aa3.6□□□□□ -1.83
HERC1-201ENST00000443617 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.6□□□□□ -1.83
HERC1-201ENST00000443617 Q9UF83 564 aa3.6□□□□□ -1.83
HERC1-201ENST00000443617 MPLKIPQ8TAP9 179 aa3.6□□□□□ -1.83
HERC1-201ENST00000443617 CDC42SE2Q9NRR3 84 aa3.6□□□□□ -1.83
HERC1-201ENST00000443617 A6NDX4 124 aa3.6□□□□□ -1.83
HERC1-201ENST00000443617 TRGV4A0A0C4DH28 118 aa3.6□□□□□ -1.83
HERC1-201ENST00000443617 F8WEM9 126 aa3.6□□□□□ -1.83
HERC1-201ENST00000443617 CFHR3Q02985 330 aa3.6□□□□□ -1.83
HERC1-201ENST00000443617 UBE2E2Q96LR5 201 aa3.6□□□□□ -1.83
HERC1-201ENST00000443617 HELZ2Q9BYK8 2649 aaKnown RBP3.6□□□□□ -1.83
HERC1-201ENST00000443617 TRBV6-4A0A1B0GX49 114 aa3.6□□□□□ -1.83
HERC1-201ENST00000443617 CDK2AP2O75956 126 aa3.6□□□□□ -1.83
HERC1-201ENST00000443617 SS18Q15532 418 aa3.6□□□□□ -1.83
HERC1-201ENST00000443617 BPY2O14599 106 aa3.59□□□□□ -1.83
HERC1-201ENST00000443617 C22orf24Q9Y442 160 aa3.59□□□□□ -1.83
HERC1-201ENST00000443617 NBEAL2Q6ZNJ1 2754 aa3.59□□□□□ -1.83
HERC1-201ENST00000443617 LMO4P61968 165 aa3.59□□□□□ -1.83
HERC1-201ENST00000443617 NOP10Q9NPE3 64 aaKnown RBP3.59□□□□□ -1.83
HERC1-201ENST00000443617 K7ENP7 123 aa3.59□□□□□ -1.83
HERC1-201ENST00000443617 PRB1P04280 392 aa3.59□□□□□ -1.83
HERC1-201ENST00000443617 LINC01547P58512 204 aaPredicted RBP3.59□□□□□ -1.83
HERC1-201ENST00000443617 TRAV10A0A0B4J240 114 aa3.59□□□□□ -1.83
HERC1-201ENST00000443617 OXTP01178 125 aa3.59□□□□□ -1.83
HERC1-201ENST00000443617 PRR3P79522 188 aaKnown RBP3.59□□□□□ -1.83
HERC1-201ENST00000443617 FREM2Q5SZK8 3169 aa3.59□□□□□ -1.84
HERC1-201ENST00000443617 IGKV2-28A0A075B6P5 120 aa3.59□□□□□ -1.84
HERC1-201ENST00000443617 IGKV2D-28P01615 120 aa3.59□□□□□ -1.84
HERC1-201ENST00000443617 DAD1P61803 113 aa3.58□□□□□ -1.84
HERC1-201ENST00000443617 IGHV4-38-2P0DP08 117 aa3.58□□□□□ -1.84
HERC1-201ENST00000443617 GNLYP22749 145 aa3.58□□□□□ -1.84
HERC1-201ENST00000443617 ZNF292O60281 2723 aa3.58□□□□□ -1.84
HERC1-201ENST00000443617 STHQ8IWL8 128 aa3.58□□□□□ -1.84
HERC1-201ENST00000443617 C11orf44Q8N8P7 122 aa3.58□□□□□ -1.84
HERC1-201ENST00000443617 H7BZZ5 65 aa3.58□□□□□ -1.84
HERC1-201ENST00000443617 FLNAP21333 2647 aaKnown RBP3.58□□□□□ -1.84
HERC1-201ENST00000443617 ZNF561-AS1K7EIQ3 104 aa3.58□□□□□ -1.84
HERC1-201ENST00000443617 FRYQ5TBA9 3013 aa3.58□□□□□ -1.84
HERC1-201ENST00000443617 LOC110117498A0A087WWA1 95 aa3.57□□□□□ -1.84
HERC1-201ENST00000443617 IGLV1-40P01703 118 aa3.57□□□□□ -1.84
HERC1-201ENST00000443617 PSCAO43653 123 aa3.57□□□□□ -1.84
HERC1-201ENST00000443617 TEP1Q99973 2627 aaKnown RBP3.57□□□□□ -1.84
HERC1-201ENST00000443617 MGAQ8IWI9 3026 aa3.57□□□□□ -1.84
HERC1-201ENST00000443617 TEX15Q9BXT5 2789 aa3.57□□□□□ -1.84
HERC1-201ENST00000443617 CXCL6P80162 114 aa3.57□□□□□ -1.84
HERC1-201ENST00000443617 RMI2Q96E14 147 aa3.57□□□□□ -1.84
HERC1-201ENST00000443617 EDN2P20800 178 aa3.57□□□□□ -1.84
HERC1-201ENST00000443617 WDFY4Q6ZS81 3184 aa3.57□□□□□ -1.84
HERC1-201ENST00000443617 A0A087WZ39 114 aa3.56□□□□□ -1.84
HERC1-201ENST00000443617 NTM-AS1Q6ZSK4 140 aa3.56□□□□□ -1.84
HERC1-201ENST00000443617 TMEM89A2RUT3 159 aa3.56□□□□□ -1.84
HERC1-201ENST00000443617 Q6ZTI0 123 aa3.56□□□□□ -1.84
HERC1-201ENST00000443617 COL6A5A8TX70 2615 aa3.56□□□□□ -1.84
HERC1-201ENST00000443617 FBXL19-AS1Q494R0 122 aa3.56□□□□□ -1.84
HERC1-201ENST00000443617 C9orf129Q5T035 196 aaKnown RBP3.56□□□□□ -1.84
HERC1-201ENST00000443617 NREPQ16612 68 aa3.56□□□□□ -1.84
HERC1-201ENST00000443617 MGAM2Q2M2H8 2515 aa3.56□□□□□ -1.84
HERC1-201ENST00000443617 C11orf71Q6IPW1 123 aa3.56□□□□□ -1.84
HERC1-201ENST00000443617 C11orf72Q8NBR9 251 aa3.55□□□□□ -1.84
HERC1-201ENST00000443617 TMEM254Q8TBM7 123 aa3.55□□□□□ -1.84
HERC1-201ENST00000443617 B4DSR2 109 aa3.55□□□□□ -1.84
HERC1-201ENST00000443617 IGHV4-59P01825 116 aa3.55□□□□□ -1.84
HERC1-201ENST00000443617 LINC00474Q9P2X8 69 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms