RNA–Protein interactions for RNA: ENST00000443430.2

POLR2J3-202, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 2

Gene POLR2J3, Length 932 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-202ENST00000443430 MRPL54Q6P161 138 aaKnown RBP12.41□□□□□ -0.42
POLR2J3-202ENST00000443430 CSDC2Q9Y534 153 aaKnown RBP12.41□□□□□ -0.42
POLR2J3-202ENST00000443430 TRAV13-1A0A0B4J241 112 aa12.4□□□□□ -0.42
POLR2J3-202ENST00000443430 UBE2D1P51668 147 aa12.4□□□□□ -0.42
POLR2J3-202ENST00000443430 RAB14P61106 215 aa12.4□□□□□ -0.42
POLR2J3-202ENST00000443430 FAM104BQ5XKR9 115 aa12.4□□□□□ -0.42
POLR2J3-202ENST00000443430 MRPL35Q9NZE8 188 aaKnown RBP12.4□□□□□ -0.42
POLR2J3-202ENST00000443430 VCYO14598 125 aa12.39□□□□□ -0.43
POLR2J3-202ENST00000443430 PPP1R17O96001 155 aa12.39□□□□□ -0.43
POLR2J3-202ENST00000443430 SUMO2P61956 95 aaKnown RBP12.39□□□□□ -0.43
POLR2J3-202ENST00000443430 NRACQ8N912 160 aa12.39□□□□□ -0.43
POLR2J3-202ENST00000443430 UBE2D4Q9Y2X8 147 aa12.39□□□□□ -0.43
POLR2J3-202ENST00000443430 A0A1B0GW15 77 aa12.38□□□□□ -0.43
POLR2J3-202ENST00000443430 RPL13AP40429 203 aaKnown RBP12.38□□□□□ -0.43
POLR2J3-202ENST00000443430 CKS2P33552 79 aa12.37□□□□□ -0.43
POLR2J3-202ENST00000443430 FAM19A5Q7Z5A7 132 aaPredicted RBP12.37□□□□□ -0.43
POLR2J3-202ENST00000443430 OR10D4PQ8NGN7 298 aa12.37□□□□□ -0.43
POLR2J3-202ENST00000443430 IMMP2LQ96T52 175 aa12.37□□□□□ -0.43
POLR2J3-202ENST00000443430 KIR2DL4Q99706 377 aa12.37□□□□□ -0.43
POLR2J3-202ENST00000443430 PPP1R2P9O14990 202 aa12.36□□□□□ -0.43
POLR2J3-202ENST00000443430 HBBP68871 147 aa12.36□□□□□ -0.43
POLR2J3-202ENST00000443430 KRTAP7-1Q8IUC3 87 aa12.36□□□□□ -0.43
POLR2J3-202ENST00000443430 F8W036 122 aa12.35□□□□□ -0.43
POLR2J3-202ENST00000443430 S100A8P05109 93 aa12.35□□□□□ -0.43
POLR2J3-202ENST00000443430 TLX1NBP0CAT3 122 aa12.35□□□□□ -0.43
POLR2J3-202ENST00000443430 C10orf25Q5T742 122 aa12.35□□□□□ -0.43
POLR2J3-202ENST00000443430 Q6ZUT4 128 aa12.35□□□□□ -0.43
POLR2J3-202ENST00000443430 F8WDY8 70 aa12.34□□□□□ -0.43
POLR2J3-202ENST00000443430 SMAGPQ0VAQ4 97 aa12.34□□□□□ -0.43
POLR2J3-202ENST00000443430 ORAOV1Q8WV07 137 aa12.34□□□□□ -0.43
POLR2J3-202ENST00000443430 LINC00862A6NCI5 91 aa12.33□□□□□ -0.44
POLR2J3-202ENST00000443430 NDUFA1O15239 70 aa12.33□□□□□ -0.44
POLR2J3-202ENST00000443430 CARHSP1Q9Y2V2 147 aaKnown RBP12.33□□□□□ -0.44
POLR2J3-202ENST00000443430 A0A1B0GXF2 115 aa12.32□□□□□ -0.44
POLR2J3-202ENST00000443430 D6R8Y8 96 aa12.32□□□□□ -0.44
POLR2J3-202ENST00000443430 TNFRSF6BO95407 300 aa12.32□□□□□ -0.44
POLR2J3-202ENST00000443430 GAGE2EQ4V326 116 aa12.32□□□□□ -0.44
POLR2J3-202ENST00000443430 UNQ6190/PRO20217Q6UXQ8 127 aa12.32□□□□□ -0.44
POLR2J3-202ENST00000443430 C20orf78Q9BR46 151 aa12.32□□□□□ -0.44
POLR2J3-202ENST00000443430 C6orf48Q9UBA6 75 aa12.32□□□□□ -0.44
POLR2J3-202ENST00000443430 GAGE2DQ9UEU5 116 aa12.32□□□□□ -0.44
POLR2J3-202ENST00000443430 TSPAN13O95857 204 aa12.31□□□□□ -0.44
POLR2J3-202ENST00000443430 UBE2BP63146 152 aa12.31□□□□□ -0.44
POLR2J3-202ENST00000443430 IGHV3OR16-9A0A0B4J2B5 98 aa12.3□□□□□ -0.44
POLR2J3-202ENST00000443430 M0QXV9 152 aa12.3□□□□□ -0.44
POLR2J3-202ENST00000443430 PNRC1Q12796 327 aaPredicted RBP12.3□□□□□ -0.44
POLR2J3-202ENST00000443430 TMEM18Q96B42 140 aa12.3□□□□□ -0.44
POLR2J3-202ENST00000443430 TIMM21Q9BVV7 248 aa12.3□□□□□ -0.44
POLR2J3-202ENST00000443430 TRBV24-1A0A075B6N3 115 aa12.29□□□□□ -0.44
POLR2J3-202ENST00000443430 NPYP01303 97 aa12.29□□□□□ -0.44
POLR2J3-202ENST00000443430 ATP5L2Q7Z4Y8 100 aa12.29□□□□□ -0.44
POLR2J3-202ENST00000443430 SMIM2Q9BVW6 85 aa12.29□□□□□ -0.44
POLR2J3-202ENST00000443430 MUC17Q685J3 4493 aa12.29□□□□□ -0.44
POLR2J3-202ENST00000443430 CLLU1Q5K131 121 aa12.28□□□□□ -0.44
POLR2J3-202ENST00000443430 MT-ND4LP03901 98 aa12.27□□□□□ -0.45
POLR2J3-202ENST00000443430 RPL32P62910 135 aaKnown RBP12.27□□□□□ -0.45
POLR2J3-202ENST00000443430 FAM104AQ969W3 186 aa12.27□□□□□ -0.45
POLR2J3-202ENST00000443430 TCAPO15273 167 aa12.26□□□□□ -0.45
POLR2J3-202ENST00000443430 PPBPP02775 128 aa12.26□□□□□ -0.45
POLR2J3-202ENST00000443430 RPL39P62891 51 aaKnown RBP12.26□□□□□ -0.45
POLR2J3-202ENST00000443430 ORMDL3Q8N138 153 aa12.26□□□□□ -0.45
POLR2J3-202ENST00000443430 ANAPC16Q96DE5 110 aa12.26□□□□□ -0.45
POLR2J3-202ENST00000443430 ZNF861PO60384 105 aa12.25□□□□□ -0.45
POLR2J3-202ENST00000443430 TMEM136Q6ZRR5 245 aa12.25□□□□□ -0.45
POLR2J3-202ENST00000443430 PRELID3AQ96N28 172 aa12.25□□□□□ -0.45
POLR2J3-202ENST00000443430 C9orf129Q5T035 196 aaKnown RBP12.23□□□□□ -0.45
POLR2J3-202ENST00000443430 KIAA0087Q14695 138 aa12.22□□□□□ -0.45
POLR2J3-202ENST00000443430 RAB5AP20339 215 aa12.21□□□□□ -0.45
POLR2J3-202ENST00000443430 IFITM2Q01629 132 aa12.21□□□□□ -0.45
POLR2J3-202ENST00000443430 LOC389332A0A1B0GUA5 103 aa12.2□□□□□ -0.46
POLR2J3-202ENST00000443430 SPANXA1Q9NS26 97 aa12.2□□□□□ -0.46
POLR2J3-202ENST00000443430 A0A087X002 238 aa12.19□□□□□ -0.46
POLR2J3-202ENST00000443430 TRBV30A0A0K0K1B3 111 aa12.19□□□□□ -0.46
POLR2J3-202ENST00000443430 NDUFC2-KCTD14E9PQ53 114 aa12.19□□□□□ -0.46
POLR2J3-202ENST00000443430 MAP1LC3AQ9H492 121 aa12.19□□□□□ -0.46
POLR2J3-202ENST00000443430 ADCYAP1P18509 176 aa12.18□□□□□ -0.46
POLR2J3-202ENST00000443430 MRPS36P82909 103 aaKnown RBP12.18□□□□□ -0.46
POLR2J3-202ENST00000443430 C2orf82Q6UX34 121 aa12.18□□□□□ -0.46
POLR2J3-202ENST00000443430 IFITM10A6NMD0 228 aa12.17□□□□□ -0.46
POLR2J3-202ENST00000443430 UQCC3Q6UW78 93 aa12.17□□□□□ -0.46
POLR2J3-202ENST00000443430 TMEM218A2RU14 115 aa12.16□□□□□ -0.46
POLR2J3-202ENST00000443430 NUPR1O60356 82 aa12.16□□□□□ -0.46
POLR2J3-202ENST00000443430 LAMTOR2Q9Y2Q5 125 aa12.16□□□□□ -0.46
POLR2J3-202ENST00000443430 TGIF2-C20orf24A0A0A6YYL0 155 aa12.15□□□□□ -0.46
POLR2J3-202ENST00000443430 IFI27P40305 119 aaPredicted RBP12.15□□□□□ -0.46
POLR2J3-202ENST00000443430 TYMSOSQ8TAI1 123 aa12.15□□□□□ -0.46
POLR2J3-202ENST00000443430 CTDSP1Q9GZU7 261 aa12.14□□□□□ -0.47
POLR2J3-202ENST00000443430 CRYGAP11844 174 aa12.13□□□□□ -0.47
POLR2J3-202ENST00000443430 COMMD7Q86VX2 200 aa12.13□□□□□ -0.47
POLR2J3-202ENST00000443430 PACRGQ96M98 296 aaPredicted RBP12.13□□□□□ -0.47
POLR2J3-202ENST00000443430 C22orf24Q9Y442 160 aa12.13□□□□□ -0.47
POLR2J3-202ENST00000443430 PRSS47A8MTI9 375 aa12.12□□□□□ -0.47
POLR2J3-202ENST00000443430 LINC00242Q5T6M2 205 aa12.12□□□□□ -0.47
POLR2J3-202ENST00000443430 Q8N8P6 123 aa12.12□□□□□ -0.47
POLR2J3-202ENST00000443430 RETNLBQ9BQ08 111 aa12.11□□□□□ -0.47
POLR2J3-202ENST00000443430 IGLV4-3A0A075B6K6 122 aa12.1□□□□□ -0.47
POLR2J3-202ENST00000443430 SEC11CQ9BY50 192 aa12.1□□□□□ -0.47
POLR2J3-202ENST00000443430 CYSLTR1Q9Y271 337 aa12.1□□□□□ -0.47
POLR2J3-202ENST00000443430 PYGO1Q9Y3Y4 419 aa12.1□□□□□ -0.47
POLR2J3-202ENST00000443430 KIAA1644Q3SXP7 199 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms