RNA–Protein interactions for RNA: ENST00000443046.5

HMGN1-208, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-208ENST00000443046 GAGE2DQ9UEU5 116 aa8.46□□□□□ -1.06
HMGN1-208ENST00000443046 A0A087X002 238 aa8.45□□□□□ -1.06
HMGN1-208ENST00000443046 KIAA0087Q14695 138 aa8.45□□□□□ -1.06
HMGN1-208ENST00000443046 C9orf129Q5T035 196 aaKnown RBP8.45□□□□□ -1.06
HMGN1-208ENST00000443046 A0A1B0GUT8 65 aa8.44□□□□□ -1.06
HMGN1-208ENST00000443046 SUMO2P61956 95 aaKnown RBP8.44□□□□□ -1.06
HMGN1-208ENST00000443046 AMN1Q8IY45 258 aa8.44□□□□□ -1.06
HMGN1-208ENST00000443046 SMKR1H3BMG3 65 aa8.43□□□□□ -1.06
HMGN1-208ENST00000443046 TAGLN2P37802 199 aaKnown RBP8.43□□□□□ -1.06
HMGN1-208ENST00000443046 KIR2DL4Q99706 377 aa8.43□□□□□ -1.06
HMGN1-208ENST00000443046 HIGD1CA8MV81 97 aa8.42□□□□□ -1.06
HMGN1-208ENST00000443046 PPP1R17O96001 155 aa8.42□□□□□ -1.06
HMGN1-208ENST00000443046 BORCS7Q96B45 105 aa8.42□□□□□ -1.06
HMGN1-208ENST00000443046 TRBV30A0A0K0K1B3 111 aa8.41□□□□□ -1.06
HMGN1-208ENST00000443046 NDUFC2-KCTD14E9PQ53 114 aa8.41□□□□□ -1.06
HMGN1-208ENST00000443046 NUPR1O60356 82 aa8.41□□□□□ -1.06
HMGN1-208ENST00000443046 TMEM18Q96B42 140 aa8.41□□□□□ -1.06
HMGN1-208ENST00000443046 PPP1R2P9O14990 202 aa8.4□□□□□ -1.06
HMGN1-208ENST00000443046 RPL39P62891 51 aaKnown RBP8.4□□□□□ -1.06
HMGN1-208ENST00000443046 MRPS36P82909 103 aaKnown RBP8.4□□□□□ -1.06
HMGN1-208ENST00000443046 TMEM250H0YL14 139 aa8.39□□□□□ -1.07
HMGN1-208ENST00000443046 RPL32P62910 135 aaKnown RBP8.39□□□□□ -1.07
HMGN1-208ENST00000443046 TPRXLQ17RH7 258 aa8.39□□□□□ -1.07
HMGN1-208ENST00000443046 TYMSOSQ8TAI1 123 aa8.39□□□□□ -1.07
HMGN1-208ENST00000443046 TRBV24-1A0A075B6N3 115 aa8.38□□□□□ -1.07
HMGN1-208ENST00000443046 CRYGAP11844 174 aa8.38□□□□□ -1.07
HMGN1-208ENST00000443046 RGS21Q2M5E4 152 aa8.38□□□□□ -1.07
HMGN1-208ENST00000443046 C2orf82Q6UX34 121 aa8.38□□□□□ -1.07
HMGN1-208ENST00000443046 CTDSP1Q9GZU7 261 aa8.38□□□□□ -1.07
HMGN1-208ENST00000443046 SPANXA1Q9NS26 97 aa8.38□□□□□ -1.07
HMGN1-208ENST00000443046 C20orf78Q9BR46 151 aa8.37□□□□□ -1.07
HMGN1-208ENST00000443046 C22orf24Q9Y442 160 aa8.37□□□□□ -1.07
HMGN1-208ENST00000443046 TCAPO15273 167 aa8.36□□□□□ -1.07
HMGN1-208ENST00000443046 HBBP68871 147 aa8.36□□□□□ -1.07
HMGN1-208ENST00000443046 KRTAP13-2Q52LG2 175 aa8.36□□□□□ -1.07
HMGN1-208ENST00000443046 RETNLBQ9BQ08 111 aa8.36□□□□□ -1.07
HMGN1-208ENST00000443046 CDIP1Q9H305 208 aa8.36□□□□□ -1.07
HMGN1-208ENST00000443046 TGIF2-C20orf24A0A0A6YYL0 155 aa8.35□□□□□ -1.07
HMGN1-208ENST00000443046 IFITM10A6NMD0 228 aa8.35□□□□□ -1.07
HMGN1-208ENST00000443046 RIGQ13278 110 aa8.35□□□□□ -1.07
HMGN1-208ENST00000443046 MRPL51Q4U2R6 128 aaKnown RBP8.35□□□□□ -1.07
HMGN1-208ENST00000443046 LINC00242Q5T6M2 205 aa8.35□□□□□ -1.07
HMGN1-208ENST00000443046 FAM104BQ5XKR9 115 aa8.35□□□□□ -1.07
HMGN1-208ENST00000443046 BATF3Q9NR55 127 aa8.35□□□□□ -1.07
HMGN1-208ENST00000443046 LINC00862A6NCI5 91 aa8.34□□□□□ -1.07
HMGN1-208ENST00000443046 RPL28P46779 137 aaKnown RBP8.34□□□□□ -1.07
HMGN1-208ENST00000443046 LBHQ53QV2 105 aaPredicted RBP8.34□□□□□ -1.07
HMGN1-208ENST00000443046 LINC01551Q86U37 167 aa8.34□□□□□ -1.07
HMGN1-208ENST00000443046 OSTCQ9NRP0 149 aa8.34□□□□□ -1.07
HMGN1-208ENST00000443046 CRCT1Q9UGL9 99 aa8.34□□□□□ -1.07
HMGN1-208ENST00000443046 ZNF727A8MUV8 499 aa8.33□□□□□ -1.08
HMGN1-208ENST00000443046 BCE1O60756 84 aa8.33□□□□□ -1.08
HMGN1-208ENST00000443046 PACRGQ96M98 296 aaPredicted RBP8.33□□□□□ -1.08
HMGN1-208ENST00000443046 ANAPC11Q9NYG5 84 aa8.33□□□□□ -1.08
HMGN1-208ENST00000443046 TP73-AS1Q9UF72 201 aa8.33□□□□□ -1.08
HMGN1-208ENST00000443046 LINC01561Q8N1V8 128 aa8.32□□□□□ -1.08
HMGN1-208ENST00000443046 SMIM2Q9BVW6 85 aa8.32□□□□□ -1.08
HMGN1-208ENST00000443046 V9GYV3 84 aa8.32□□□□□ -1.08
HMGN1-208ENST00000443046 IGLV7-46A0A075B6I9 117 aa8.31□□□□□ -1.08
HMGN1-208ENST00000443046 TNFRSF6BO95407 300 aa8.31□□□□□ -1.08
HMGN1-208ENST00000443046 CTAG1AP78358 180 aa8.31□□□□□ -1.08
HMGN1-208ENST00000443046 FAM229BQ4G0N7 80 aa8.3□□□□□ -1.08
HMGN1-208ENST00000443046 SLC51BQ86UW2 128 aa8.3□□□□□ -1.08
HMGN1-208ENST00000443046 KRTAP13-1Q8IUC0 172 aa8.3□□□□□ -1.08
HMGN1-208ENST00000443046 LINC00469Q8N7U9 141 aa8.3□□□□□ -1.08
HMGN1-208ENST00000443046 LINC00304Q8N9R0 145 aa8.3□□□□□ -1.08
HMGN1-208ENST00000443046 PYGO1Q9Y3Y4 419 aa8.3□□□□□ -1.08
HMGN1-208ENST00000443046 CKS2P33552 79 aa8.29□□□□□ -1.08
HMGN1-208ENST00000443046 LINC00173Q6ZV60 143 aa8.29□□□□□ -1.08
HMGN1-208ENST00000443046 MRPL55Q7Z7F7 128 aaKnown RBP8.29□□□□□ -1.08
HMGN1-208ENST00000443046 SMIM7Q9BQ49 75 aa8.29□□□□□ -1.08
HMGN1-208ENST00000443046 XAGE1AQ9HD64 81 aa8.29□□□□□ -1.08
HMGN1-208ENST00000443046 IGLV4-3A0A075B6K6 122 aa8.28□□□□□ -1.08
HMGN1-208ENST00000443046 NAT8BQ9UHF3 227 aa8.28□□□□□ -1.08
HMGN1-208ENST00000443046 IFI27P40305 119 aaPredicted RBP8.27□□□□□ -1.09
HMGN1-208ENST00000443046 CEBPGP53567 150 aa8.27□□□□□ -1.09
HMGN1-208ENST00000443046 FAM74A3Q4VXF1 159 aa8.27□□□□□ -1.09
HMGN1-208ENST00000443046 D6R8Y8 96 aa8.26□□□□□ -1.09
HMGN1-208ENST00000443046 NPYP01303 97 aa8.26□□□□□ -1.09
HMGN1-208ENST00000443046 TMEM141Q96I45 108 aa8.26□□□□□ -1.09
HMGN1-208ENST00000443046 LINC00167Q96N53 147 aa8.26□□□□□ -1.09
HMGN1-208ENST00000443046 SMIM27A0A1W2PRY6 76 aa8.25□□□□□ -1.09
HMGN1-208ENST00000443046 Q6ZN92 141 aa8.25□□□□□ -1.09
HMGN1-208ENST00000443046 Q8IZM0 81 aa8.25□□□□□ -1.09
HMGN1-208ENST00000443046 PPDPFQ9H3Y8 114 aa8.25□□□□□ -1.09
HMGN1-208ENST00000443046 A0A1B0GW15 77 aa8.24□□□□□ -1.09
HMGN1-208ENST00000443046 RPL37AP8A6NKH3 93 aa8.24□□□□□ -1.09
HMGN1-208ENST00000443046 CKS1BP61024 79 aa8.24□□□□□ -1.09
HMGN1-208ENST00000443046 BLOC1S1P78537 153 aa8.24□□□□□ -1.09
HMGN1-208ENST00000443046 C6orf226Q5I0X4 101 aa8.24□□□□□ -1.09
HMGN1-208ENST00000443046 FAM19A3Q7Z5A8 133 aa8.24□□□□□ -1.09
HMGN1-208ENST00000443046 EIF5A2Q9GZV4 153 aaKnown RBP8.24□□□□□ -1.09
HMGN1-208ENST00000443046 PRSS2P07478 247 aa8.23□□□□□ -1.09
HMGN1-208ENST00000443046 LINC01547P58512 204 aaPredicted RBP8.23□□□□□ -1.09
HMGN1-208ENST00000443046 TEX43Q6ZNM6 134 aa8.23□□□□□ -1.09
HMGN1-208ENST00000443046 SRP19P09132 144 aaKnown RBP8.22□□□□□ -1.09
HMGN1-208ENST00000443046 ASB16-AS1Q495Z4 193 aa8.22□□□□□ -1.09
HMGN1-208ENST00000443046 AMELXQ99217 191 aa8.22□□□□□ -1.09
HMGN1-208ENST00000443046 KRTAP4-1Q9BYQ7 146 aa8.22□□□□□ -1.09
HMGN1-208ENST00000443046 TOMM7Q9P0U1 55 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms