RNA–Protein interactions for RNA: ENST00000442009.6

POLR1E-203, Transcript of RNA polymerase I subunit E, humanhuman

TSL 2

Gene POLR1E, Length 1,805 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1E-203ENST00000442009 ORAOV1Q8WV07 137 aa12.88□□□□□ -0.35
POLR1E-203ENST00000442009 STAB2Q8WWQ8 2551 aa12.88□□□□□ -0.35
POLR1E-203ENST00000442009 DEFB131BA0A096LNP1 70 aa12.86□□□□□ -0.35
POLR1E-203ENST00000442009 LINC00959A0A1B0GUT2 108 aa12.86□□□□□ -0.35
POLR1E-203ENST00000442009 SMIM1B2RUZ4 78 aa12.86□□□□□ -0.35
POLR1E-203ENST00000442009 IGHV3OR16-9A0A0B4J2B5 98 aa12.85□□□□□ -0.35
POLR1E-203ENST00000442009 SCGB1D4Q6XE38 83 aa12.85□□□□□ -0.35
POLR1E-203ENST00000442009 ZFAND6Q6FIF0 208 aa12.85□□□□□ -0.35
POLR1E-203ENST00000442009 CEND1Q8N111 149 aa12.85□□□□□ -0.35
POLR1E-203ENST00000442009 C10orf126Q8N4M7 172 aa12.85□□□□□ -0.35
POLR1E-203ENST00000442009 DNAH9Q9NYC9 4486 aa12.84□□□□□ -0.35
POLR1E-203ENST00000442009 Q8N3U1 123 aa12.84□□□□□ -0.35
POLR1E-203ENST00000442009 FXYD2P54710 66 aa12.83□□□□□ -0.35
POLR1E-203ENST00000442009 SPANXB1Q9NS25 103 aaPredicted RBP12.83□□□□□ -0.35
POLR1E-203ENST00000442009 GCSHP23434 173 aa12.83□□□□□ -0.36
POLR1E-203ENST00000442009 HIST1H4GQ99525 98 aa12.83□□□□□ -0.36
POLR1E-203ENST00000442009 IGKV3OR2-268A0A0C4DH90 116 aa12.82□□□□□ -0.36
POLR1E-203ENST00000442009 K7EP13 123 aa12.82□□□□□ -0.36
POLR1E-203ENST00000442009 CCL25O15444 150 aa12.82□□□□□ -0.36
POLR1E-203ENST00000442009 NDUFA12Q9UI09 145 aa12.82□□□□□ -0.36
POLR1E-203ENST00000442009 A0A0J9YXY3 114 aa12.81□□□□□ -0.36
POLR1E-203ENST00000442009 TAX1BP3O14907 124 aa12.81□□□□□ -0.36
POLR1E-203ENST00000442009 LINC00269Q8N2A0 174 aa12.81□□□□□ -0.36
POLR1E-203ENST00000442009 A0A087WZ39 114 aa12.8□□□□□ -0.36
POLR1E-203ENST00000442009 TRAV10A0A0B4J240 114 aa12.8□□□□□ -0.36
POLR1E-203ENST00000442009 B9D2Q9BPU9 175 aa12.8□□□□□ -0.36
POLR1E-203ENST00000442009 A6NDN8 102 aa12.79□□□□□ -0.36
POLR1E-203ENST00000442009 ESRGQ1W209 222 aa12.79□□□□□ -0.36
POLR1E-203ENST00000442009 DNHD1Q96M86 4753 aa12.79□□□□□ -0.36
POLR1E-203ENST00000442009 NDUFA1O15239 70 aa12.78□□□□□ -0.36
POLR1E-203ENST00000442009 SS18Q15532 418 aa12.78□□□□□ -0.36
POLR1E-203ENST00000442009 LITAFQ99732 161 aa12.78□□□□□ -0.36
POLR1E-203ENST00000442009 ANGP03950 147 aaKnown RBP12.78□□□□□ -0.36
POLR1E-203ENST00000442009 REG3AQ06141 175 aa12.78□□□□□ -0.36
POLR1E-203ENST00000442009 Q6ZVH6 145 aa12.78□□□□□ -0.36
POLR1E-203ENST00000442009 PRR34Q9NV39 138 aa12.78□□□□□ -0.36
POLR1E-203ENST00000442009 IGHV3-30P01768 117 aa12.77□□□□□ -0.37
POLR1E-203ENST00000442009 IGHV3-30-5P0DP03 117 aa12.77□□□□□ -0.37
POLR1E-203ENST00000442009 SRSF9Q13242 221 aaKnown RBP eCLIP12.76□□□□□ -0.37
POLR1E-203ENST00000442009 CLPSL2Q6UWE3 100 aa12.76□□□□□ -0.37
POLR1E-203ENST00000442009 ZNF625Q96I27 306 aaPredicted RBP12.76□□□□□ -0.37
POLR1E-203ENST00000442009 COX11Q9Y6N1 276 aa12.76□□□□□ -0.37
POLR1E-203ENST00000442009 LINC01561Q8N1V8 128 aa12.75□□□□□ -0.37
POLR1E-203ENST00000442009 A0A1B0GWB2 263 aa12.74□□□□□ -0.37
POLR1E-203ENST00000442009 XCL1P47992 114 aa12.74□□□□□ -0.37
POLR1E-203ENST00000442009 PTTG1IPP53801 180 aa12.74□□□□□ -0.37
POLR1E-203ENST00000442009 C5orf38Q86SI9 138 aa12.74□□□□□ -0.37
POLR1E-203ENST00000442009 WFDC10BQ8IUB3 73 aa12.74□□□□□ -0.37
POLR1E-203ENST00000442009 TIMM17BO60830 172 aa12.74□□□□□ -0.37
POLR1E-203ENST00000442009 CD164L2Q6UWJ8 174 aa12.74□□□□□ -0.37
POLR1E-203ENST00000442009 Q9H8V8 135 aa12.74□□□□□ -0.37
POLR1E-203ENST00000442009 TMEM238C9JI98 176 aa12.73□□□□□ -0.37
POLR1E-203ENST00000442009 KRTAP21-3Q3LHN1 58 aa12.73□□□□□ -0.37
POLR1E-203ENST00000442009 ADAMTSL4-AS1Q5T5F5 129 aa12.73□□□□□ -0.37
POLR1E-203ENST00000442009 C15orf53Q8NAA6 179 aa12.73□□□□□ -0.37
POLR1E-203ENST00000442009 MEGF8Q7Z7M0 2845 aa12.73□□□□□ -0.37
POLR1E-203ENST00000442009 SMIM13P0DJ93 91 aa12.72□□□□□ -0.37
POLR1E-203ENST00000442009 ENHOQ6UWT2 76 aa12.72□□□□□ -0.37
POLR1E-203ENST00000442009 COX7B2Q8TF08 81 aa12.72□□□□□ -0.37
POLR1E-203ENST00000442009 CHCHD10Q8WYQ3 142 aaPredicted RBP12.72□□□□□ -0.37
POLR1E-203ENST00000442009 KLK12Q9UKR0 248 aa12.72□□□□□ -0.37
POLR1E-203ENST00000442009 NHP2Q9NX24 153 aaKnown RBP12.72□□□□□ -0.37
POLR1E-203ENST00000442009 SPANXDQ9BXN6 97 aa12.71□□□□□ -0.38
POLR1E-203ENST00000442009 SPANXCQ9NY87 97 aa12.71□□□□□ -0.38
POLR1E-203ENST00000442009 K7ERJ3 54 aa12.69□□□□□ -0.38
POLR1E-203ENST00000442009 C9orf118A6NHY6 69 aa12.69□□□□□ -0.38
POLR1E-203ENST00000442009 IGHV3-33P01772 117 aa12.69□□□□□ -0.38
POLR1E-203ENST00000442009 HERV-K104P63124 156 aa12.69□□□□□ -0.38
POLR1E-203ENST00000442009 FOXI1Q12951 378 aa12.69□□□□□ -0.38
POLR1E-203ENST00000442009 IGLV10-54A0A075B6I4 117 aa12.68□□□□□ -0.38
POLR1E-203ENST00000442009 MUSTN1Q8IVN3 82 aa12.68□□□□□ -0.38
POLR1E-203ENST00000442009 TMEM238LA0A1B0GVL6 79 aa12.67□□□□□ -0.38
POLR1E-203ENST00000442009 A6NJY4 79 aa12.67□□□□□ -0.38
POLR1E-203ENST00000442009 MIAQ16674 131 aa12.67□□□□□ -0.38
POLR1E-203ENST00000442009 LINC01556Q5JQF7 62 aa12.67□□□□□ -0.38
POLR1E-203ENST00000442009 COX7A2LO14548 114 aa12.67□□□□□ -0.38
POLR1E-203ENST00000442009 NHLRC4P0CG21 123 aaPredicted RBP12.67□□□□□ -0.38
POLR1E-203ENST00000442009 RAB37Q96AX2 223 aa12.67□□□□□ -0.38
POLR1E-203ENST00000442009 PRKDCP78527 4128 aaKnown RBP12.65□□□□□ -0.38
POLR1E-203ENST00000442009 TRAV8-4A0A0B4J246 113 aa12.65□□□□□ -0.38
POLR1E-203ENST00000442009 Q8IZM0 81 aa12.65□□□□□ -0.38
POLR1E-203ENST00000442009 TOMM7Q9P0U1 55 aa12.65□□□□□ -0.38
POLR1E-203ENST00000442009 DNAH10OSP0CZ25 163 aa12.65□□□□□ -0.39
POLR1E-203ENST00000442009 CIRBPQ14011 172 aaKnown RBP12.65□□□□□ -0.39
POLR1E-203ENST00000442009 KIAA0087Q14695 138 aa12.65□□□□□ -0.39
POLR1E-203ENST00000442009 LINC00588Q9Y4M8 146 aa12.65□□□□□ -0.39
POLR1E-203ENST00000442009 A4D1N5 150 aa12.64□□□□□ -0.39
POLR1E-203ENST00000442009 CFC1BP0CG36 223 aa12.64□□□□□ -0.39
POLR1E-203ENST00000442009 CFC1P0CG37 223 aa12.64□□□□□ -0.39
POLR1E-203ENST00000442009 KRTAP26-1Q6PEX3 210 aa12.64□□□□□ -0.39
POLR1E-203ENST00000442009 GAGE12HA6NDE8 117 aa12.63□□□□□ -0.39
POLR1E-203ENST00000442009 IGLL5B9A064 214 aa12.63□□□□□ -0.39
POLR1E-203ENST00000442009 PRSS2P07478 247 aa12.63□□□□□ -0.39
POLR1E-203ENST00000442009 IFITM1P13164 125 aa12.63□□□□□ -0.39
POLR1E-203ENST00000442009 RPL24P83731 157 aaKnown RBP12.63□□□□□ -0.39
POLR1E-203ENST00000442009 UBE2WQ96B02 151 aa12.63□□□□□ -0.39
POLR1E-203ENST00000442009 EIF4EBP3O60516 100 aaPredicted RBP12.62□□□□□ -0.39
POLR1E-203ENST00000442009 SFTA2Q6UW10 78 aa12.62□□□□□ -0.39
POLR1E-203ENST00000442009 DYNC2H1Q8NCM8 4307 aaKnown RBP12.62□□□□□ -0.39
POLR1E-203ENST00000442009 H3BUT2 72 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms