RNA–Protein interactions for RNA: ENST00000441915.5

SEMA3B-207, Transcript of semaphorin 3B, humanhuman

TSL 1 (best)

Gene SEMA3B, Length 2,710 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-207ENST00000441915 DNAJC9-AS1A6NH13 148 aa11.78□□□□□ -0.52
SEMA3B-207ENST00000441915 PPDPFQ9H3Y8 114 aa11.78□□□□□ -0.52
SEMA3B-207ENST00000441915 A0A0U1RRA0 63 aa11.78□□□□□ -0.52
SEMA3B-207ENST00000441915 CITED2Q99967 270 aaPredicted RBP11.78□□□□□ -0.52
SEMA3B-207ENST00000441915 CDC42SE2Q9NRR3 84 aa11.77□□□□□ -0.52
SEMA3B-207ENST00000441915 PRIMA1Q86XR5 153 aa11.77□□□□□ -0.53
SEMA3B-207ENST00000441915 KRTAP1-3Q8IUG1 177 aa11.77□□□□□ -0.53
SEMA3B-207ENST00000441915 NOP10Q9NPE3 64 aaKnown RBP11.77□□□□□ -0.53
SEMA3B-207ENST00000441915 ZNF843Q8N446 348 aa11.76□□□□□ -0.53
SEMA3B-207ENST00000441915 UBE2L6O14933 153 aa11.75□□□□□ -0.53
SEMA3B-207ENST00000441915 MRPL23Q16540 153 aaKnown RBP11.75□□□□□ -0.53
SEMA3B-207ENST00000441915 NF1P21359 2839 aa11.75□□□□□ -0.53
SEMA3B-207ENST00000441915 CHCHD5Q9BSY4 110 aa11.74□□□□□ -0.53
SEMA3B-207ENST00000441915 C2CD3Q4AC94 2353 aa11.74□□□□□ -0.53
SEMA3B-207ENST00000441915 TMEM243Q9BU79 118 aa11.73□□□□□ -0.53
SEMA3B-207ENST00000441915 APCP25054 2843 aa11.73□□□□□ -0.53
SEMA3B-207ENST00000441915 F5H768 121 aa11.73□□□□□ -0.53
SEMA3B-207ENST00000441915 CMC4P56277 68 aaPredicted RBP11.73□□□□□ -0.53
SEMA3B-207ENST00000441915 C3orf56Q8N813 242 aa11.73□□□□□ -0.53
SEMA3B-207ENST00000441915 TRGV2A0A075B6R0 118 aa11.73□□□□□ -0.53
SEMA3B-207ENST00000441915 C16orf74Q96GX8 76 aa11.73□□□□□ -0.53
SEMA3B-207ENST00000441915 ITPR3Q14573 2671 aa11.72□□□□□ -0.53
SEMA3B-207ENST00000441915 SOSTDC1Q6X4U4 206 aa11.72□□□□□ -0.53
SEMA3B-207ENST00000441915 ESM1Q9NQ30 184 aa11.72□□□□□ -0.53
SEMA3B-207ENST00000441915 NBPF19A0A087WUL8 3843 aa11.71□□□□□ -0.53
SEMA3B-207ENST00000441915 COX7A2LO14548 114 aa11.71□□□□□ -0.53
SEMA3B-207ENST00000441915 GIG44P09565 113 aaPredicted RBP11.71□□□□□ -0.54
SEMA3B-207ENST00000441915 WFDC11Q8NEX6 87 aa11.71□□□□□ -0.54
SEMA3B-207ENST00000441915 JMJD1CQ15652 2540 aa11.69□□□□□ -0.54
SEMA3B-207ENST00000441915 CCDC168Q8NDH2 2452 aa11.69□□□□□ -0.54
SEMA3B-207ENST00000441915 PLAC8L1A1L4L8 177 aa11.69□□□□□ -0.54
SEMA3B-207ENST00000441915 SETD2Q9BYW2 2564 aaPredicted RBP11.69□□□□□ -0.54
SEMA3B-207ENST00000441915 TRBV6-4A0A1B0GX49 114 aa11.69□□□□□ -0.54
SEMA3B-207ENST00000441915 DEFB121Q5J5C9 76 aa11.68□□□□□ -0.54
SEMA3B-207ENST00000441915 WFDC10AQ9H1F0 79 aa11.68□□□□□ -0.54
SEMA3B-207ENST00000441915 TRBV7-7A0A0K0K1E9 115 aa11.68□□□□□ -0.54
SEMA3B-207ENST00000441915 FAM240AA0A1B0GVK7 77 aa11.68□□□□□ -0.54
SEMA3B-207ENST00000441915 RPL35AP18077 110 aaKnown RBP11.68□□□□□ -0.54
SEMA3B-207ENST00000441915 LOC100131303A0A0U1RQF7 123 aa11.67□□□□□ -0.54
SEMA3B-207ENST00000441915 TRGV4A0A0C4DH28 118 aa11.67□□□□□ -0.54
SEMA3B-207ENST00000441915 LINC01006Q8NI28 216 aa11.66□□□□□ -0.54
SEMA3B-207ENST00000441915 NIPBLQ6KC79 2804 aaeCLIP11.66□□□□□ -0.54
SEMA3B-207ENST00000441915 SETXQ7Z333 2677 aaKnown RBP11.66□□□□□ -0.54
SEMA3B-207ENST00000441915 FLNAP21333 2647 aaKnown RBP11.66□□□□□ -0.54
SEMA3B-207ENST00000441915 OVOL2Q9BRP0 275 aa11.66□□□□□ -0.54
SEMA3B-207ENST00000441915 IGLV1-51P01701 117 aa11.65□□□□□ -0.54
SEMA3B-207ENST00000441915 C5orf47Q569G3 176 aa11.65□□□□□ -0.55
SEMA3B-207ENST00000441915 COX7B2Q8TF08 81 aa11.64□□□□□ -0.55
SEMA3B-207ENST00000441915 C19orf73Q9NVV2 129 aa11.64□□□□□ -0.55
SEMA3B-207ENST00000441915 IGKV3OR2-268A0A0C4DH90 116 aa11.64□□□□□ -0.55
SEMA3B-207ENST00000441915 CSNK1G2-AS1Q8NCQ2 148 aa11.64□□□□□ -0.55
SEMA3B-207ENST00000441915 TRACP01848 142 aa11.63□□□□□ -0.55
SEMA3B-207ENST00000441915 TOMM7Q9P0U1 55 aa11.63□□□□□ -0.55
SEMA3B-207ENST00000441915 PF4P02776 101 aa11.63□□□□□ -0.55
SEMA3B-207ENST00000441915 TRBV6-8A0A0A6YYG3 113 aa11.62□□□□□ -0.55
SEMA3B-207ENST00000441915 TRAV13-2A0A0B4J235 113 aa11.62□□□□□ -0.55
SEMA3B-207ENST00000441915 FAM236AA0A1B0GUQ0 79 aa11.62□□□□□ -0.55
SEMA3B-207ENST00000441915 FAM236BA0A1B0GV22 79 aa11.62□□□□□ -0.55
SEMA3B-207ENST00000441915 HIST2H2BCQ6DN03 193 aa11.62□□□□□ -0.55
SEMA3B-207ENST00000441915 C16orf95Q9H693 158 aa11.62□□□□□ -0.55
SEMA3B-207ENST00000441915 C9orf153Q5TBE3 101 aa11.61□□□□□ -0.55
SEMA3B-207ENST00000441915 MIR7-3HGQ8N6C7 128 aa11.61□□□□□ -0.55
SEMA3B-207ENST00000441915 RNASE1P07998 156 aaKnown RBP11.61□□□□□ -0.55
SEMA3B-207ENST00000441915 PLA2G2AP14555 144 aa11.61□□□□□ -0.55
SEMA3B-207ENST00000441915 IMUPQ9GZP8 106 aa11.61□□□□□ -0.55
SEMA3B-207ENST00000441915 IGLV4-60A0A075B6I1 120 aa11.6□□□□□ -0.55
SEMA3B-207ENST00000441915 CRPP02741 224 aa11.6□□□□□ -0.55
SEMA3B-207ENST00000441915 FHL2Q14192 279 aa11.6□□□□□ -0.55
SEMA3B-207ENST00000441915 C3orf22Q8N5N4 141 aa11.6□□□□□ -0.55
SEMA3B-207ENST00000441915 FAM222AQ5U5X8 452 aa11.6□□□□□ -0.55
SEMA3B-207ENST00000441915 LOC107984640A0A0U1RRK4 108 aa11.59□□□□□ -0.55
SEMA3B-207ENST00000441915 ACYP1P07311 99 aa11.59□□□□□ -0.55
SEMA3B-207ENST00000441915 SND1-IT1Q9HBX3 110 aa11.59□□□□□ -0.55
SEMA3B-207ENST00000441915 IGHV3OR16-9A0A0B4J2B5 98 aa11.59□□□□□ -0.55
SEMA3B-207ENST00000441915 BAALC-AS2P0C853 105 aa11.59□□□□□ -0.55
SEMA3B-207ENST00000441915 RPL28P46779 137 aaKnown RBP11.59□□□□□ -0.55
SEMA3B-207ENST00000441915 LINC00158P58513 81 aa11.58□□□□□ -0.56
SEMA3B-207ENST00000441915 FAM218AQ96MZ4 157 aa11.58□□□□□ -0.56
SEMA3B-207ENST00000441915 UQCRQO14949 82 aa11.57□□□□□ -0.56
SEMA3B-207ENST00000441915 SMIM9A6NGZ8 99 aa11.57□□□□□ -0.56
SEMA3B-207ENST00000441915 LINC00337Q8N6G1 96 aa11.57□□□□□ -0.56
SEMA3B-207ENST00000441915 A0A087WZ39 114 aa11.56□□□□□ -0.56
SEMA3B-207ENST00000441915 MTORP42345 2549 aa11.56□□□□□ -0.56
SEMA3B-207ENST00000441915 IGKV2-28A0A075B6P5 120 aa11.56□□□□□ -0.56
SEMA3B-207ENST00000441915 IGKV2D-28P01615 120 aa11.56□□□□□ -0.56
SEMA3B-207ENST00000441915 ACANP16112 2415 aa11.55□□□□□ -0.56
SEMA3B-207ENST00000441915 J3KT08 172 aa11.55□□□□□ -0.56
SEMA3B-207ENST00000441915 LINC00526Q96FQ7 95 aa11.55□□□□□ -0.56
SEMA3B-207ENST00000441915 IBA57-AS1B1ANH7 110 aa11.55□□□□□ -0.56
SEMA3B-207ENST00000441915 KRTAP1-1Q07627 177 aa11.55□□□□□ -0.56
SEMA3B-207ENST00000441915 DEFB130BP0DP73 79 aa11.54□□□□□ -0.56
SEMA3B-207ENST00000441915 DEFB130AP0DP74 79 aa11.54□□□□□ -0.56
SEMA3B-207ENST00000441915 C5orf38Q86SI9 138 aa11.54□□□□□ -0.56
SEMA3B-207ENST00000441915 A0A1B0GX51 115 aa11.54□□□□□ -0.56
SEMA3B-207ENST00000441915 FAM19A5Q7Z5A7 132 aaPredicted RBP11.54□□□□□ -0.56
SEMA3B-207ENST00000441915 CCL18P55774 89 aa11.53□□□□□ -0.56
SEMA3B-207ENST00000441915 PFN2P35080 140 aa11.52□□□□□ -0.56
SEMA3B-207ENST00000441915 Q9HAA7 133 aa11.52□□□□□ -0.56
SEMA3B-207ENST00000441915 LINC00959A0A1B0GUT2 108 aa11.52□□□□□ -0.57
SEMA3B-207ENST00000441915 KIR2DL5BQ8NHK3 375 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms