RNA–Protein interactions for RNA: ENST00000441542.6

HDAC9-214, Transcript of histone deacetylase 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HDAC9, Length 3,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-214ENST00000441542 LINC00158P58513 81 aa5.46□□□□□ -1.53
HDAC9-214ENST00000441542 CDSNQ15517 529 aa5.46□□□□□ -1.53
HDAC9-214ENST00000441542 C5orf56Q8N8D9 126 aa5.46□□□□□ -1.53
HDAC9-214ENST00000441542 FAM104AQ969W3 186 aa5.46□□□□□ -1.53
HDAC9-214ENST00000441542 A0A0U1RQV1 116 aa5.46□□□□□ -1.54
HDAC9-214ENST00000441542 NDUFA4O00483 81 aa5.46□□□□□ -1.54
HDAC9-214ENST00000441542 GHRHP01286 108 aa5.46□□□□□ -1.54
HDAC9-214ENST00000441542 CFHR3Q02985 330 aa5.46□□□□□ -1.54
HDAC9-214ENST00000441542 C5orf38Q86SI9 138 aa5.46□□□□□ -1.54
HDAC9-214ENST00000441542 SERP2Q8N6R1 65 aa5.46□□□□□ -1.54
HDAC9-214ENST00000441542 LINC01600Q96MT4 127 aa5.46□□□□□ -1.54
HDAC9-214ENST00000441542 PYGO1Q9Y3Y4 419 aa5.46□□□□□ -1.54
HDAC9-214ENST00000441542 MINOS1-NBL1R4GNA1 71 aa5.46□□□□□ -1.54
HDAC9-214ENST00000441542 ZFHX3Q15911 3703 aa5.46□□□□□ -1.54
HDAC9-214ENST00000441542 TMEM258P61165 79 aa5.46□□□□□ -1.54
HDAC9-214ENST00000441542 TMEM243Q9BU79 118 aa5.46□□□□□ -1.54
HDAC9-214ENST00000441542 MYO9AB2RTY4 2548 aa5.45□□□□□ -1.54
HDAC9-214ENST00000441542 H3BS24 57 aa5.45□□□□□ -1.54
HDAC9-214ENST00000441542 RPL36AP83881 106 aaKnown RBP5.45□□□□□ -1.54
HDAC9-214ENST00000441542 FHL2Q14192 279 aa5.45□□□□□ -1.54
HDAC9-214ENST00000441542 RPL36ALQ969Q0 106 aaKnown RBP5.45□□□□□ -1.54
HDAC9-214ENST00000441542 UBE2D4Q9Y2X8 147 aa5.45□□□□□ -1.54
HDAC9-214ENST00000441542 UTP20O75691 2785 aaKnown RBP5.45□□□□□ -1.54
HDAC9-214ENST00000441542 MIR7-3HGQ8N6C7 128 aa5.45□□□□□ -1.54
HDAC9-214ENST00000441542 BBC3Q96PG8 261 aaPredicted RBP5.45□□□□□ -1.54
HDAC9-214ENST00000441542 USP9XQ93008 2570 aaPredicted RBP5.45□□□□□ -1.54
HDAC9-214ENST00000441542 H3BUX3 64 aa5.44□□□□□ -1.54
HDAC9-214ENST00000441542 PAX4O43316 350 aa5.44□□□□□ -1.54
HDAC9-214ENST00000441542 CXCL5P42830 114 aa5.44□□□□□ -1.54
HDAC9-214ENST00000441542 ENHOQ6UWT2 76 aa5.44□□□□□ -1.54
HDAC9-214ENST00000441542 C1orf158Q8N1D5 194 aa5.44□□□□□ -1.54
HDAC9-214ENST00000441542 LINC01561Q8N1V8 128 aa5.44□□□□□ -1.54
HDAC9-214ENST00000441542 BPESC1Q9GZL8 116 aa5.44□□□□□ -1.54
HDAC9-214ENST00000441542 C22orf24Q9Y442 160 aa5.44□□□□□ -1.54
HDAC9-214ENST00000441542 JMJD1CQ15652 2540 aa5.44□□□□□ -1.54
HDAC9-214ENST00000441542 CRYBG3Q68DQ2 2970 aa5.44□□□□□ -1.54
HDAC9-214ENST00000441542 NDUFA1O15239 70 aa5.44□□□□□ -1.54
HDAC9-214ENST00000441542 SNRPD3P62318 126 aaKnown RBP5.44□□□□□ -1.54
HDAC9-214ENST00000441542 SNURFQ9Y675 71 aa5.44□□□□□ -1.54
HDAC9-214ENST00000441542 CHCHD7Q9BUK0 85 aa5.44□□□□□ -1.54
HDAC9-214ENST00000441542 MOB4Q9Y3A3 225 aa5.44□□□□□ -1.54
HDAC9-214ENST00000441542 CCDC168Q8NDH2 2452 aa5.43□□□□□ -1.54
HDAC9-214ENST00000441542 RBMY1A1P0DJD3 496 aaKnown RBP5.43□□□□□ -1.54
HDAC9-214ENST00000441542 RBMY1CP0DJD4 496 aa5.43□□□□□ -1.54
HDAC9-214ENST00000441542 PMAIP1Q13794 54 aa5.43□□□□□ -1.54
HDAC9-214ENST00000441542 RBMY1FQ15415 496 aaKnown RBP5.43□□□□□ -1.54
HDAC9-214ENST00000441542 C19orf54Q5BKX5 351 aa5.43□□□□□ -1.54
HDAC9-214ENST00000441542 SND1-IT1Q9HBX3 110 aa5.43□□□□□ -1.54
HDAC9-214ENST00000441542 USP9YO00507 2555 aaPredicted RBP5.43□□□□□ -1.54
HDAC9-214ENST00000441542 LINC00337Q8N6G1 96 aa5.43□□□□□ -1.54
HDAC9-214ENST00000441542 SMIM11BQ8TCY0 68 aa5.43□□□□□ -1.54
HDAC9-214ENST00000441542 RPL28P46779 137 aaKnown RBP5.42□□□□□ -1.54
HDAC9-214ENST00000441542 DEFB131AP59861 70 aa5.42□□□□□ -1.54
HDAC9-214ENST00000441542 FN1P02751 2386 aaKnown RBP5.42□□□□□ -1.54
HDAC9-214ENST00000441542 HIVEP3Q5T1R4 2406 aa5.42□□□□□ -1.54
HDAC9-214ENST00000441542 ABCA12Q86UK0 2595 aa5.42□□□□□ -1.54
HDAC9-214ENST00000441542 RBMY1BA6NDE4 496 aaKnown RBP5.42□□□□□ -1.54
HDAC9-214ENST00000441542 RBMY1EA6NEQ0 496 aaKnown RBP5.42□□□□□ -1.54
HDAC9-214ENST00000441542 RBMY1DP0C7P1 496 aaKnown RBP5.42□□□□□ -1.54
HDAC9-214ENST00000441542 LINC00242Q5T6M2 205 aa5.42□□□□□ -1.54
HDAC9-214ENST00000441542 BSNQ9UPA5 3926 aa5.42□□□□□ -1.54
HDAC9-214ENST00000441542 IGFL3Q6UXB1 125 aa5.42□□□□□ -1.54
HDAC9-214ENST00000441542 UBE2E2Q96LR5 201 aa5.42□□□□□ -1.54
HDAC9-214ENST00000441542 HRNRQ86YZ3 2850 aaPredicted RBP5.41□□□□□ -1.54
HDAC9-214ENST00000441542 NDUFC2O95298 119 aa5.41□□□□□ -1.54
HDAC9-214ENST00000441542 BEAN1Q3B7T3 259 aa5.41□□□□□ -1.54
HDAC9-214ENST00000441542 SMIM1B2RUZ4 78 aa5.41□□□□□ -1.54
HDAC9-214ENST00000441542 IGHV4-38-2P0DP08 117 aa5.41□□□□□ -1.54
HDAC9-214ENST00000441542 POLQO75417 2590 aa5.41□□□□□ -1.54
HDAC9-214ENST00000441542 TLN2Q9Y4G6 2542 aa5.4□□□□□ -1.54
HDAC9-214ENST00000441542 PRR3P79522 188 aaKnown RBP5.4□□□□□ -1.54
HDAC9-214ENST00000441542 HAMPP81172 84 aa5.4□□□□□ -1.54
HDAC9-214ENST00000441542 DEFB136Q30KP8 78 aa5.4□□□□□ -1.54
HDAC9-214ENST00000441542 TRGV1A0A0A0MS02 117 aa5.4□□□□□ -1.55
HDAC9-214ENST00000441542 UPK3BQ9BT76 320 aa5.4□□□□□ -1.55
HDAC9-214ENST00000441542 A0A1W2PPR1 153 aa5.39□□□□□ -1.55
HDAC9-214ENST00000441542 SCXQ7RTU7 201 aa5.39□□□□□ -1.55
HDAC9-214ENST00000441542 BRK1Q8WUW1 75 aa5.39□□□□□ -1.55
HDAC9-214ENST00000441542 XCL2Q9UBD3 114 aa5.39□□□□□ -1.55
HDAC9-214ENST00000441542 TIMM17BO60830 172 aa5.39□□□□□ -1.55
HDAC9-214ENST00000441542 Q6JHZ5 121 aa5.39□□□□□ -1.55
HDAC9-214ENST00000441542 TRAV13-2A0A0B4J235 113 aa5.38□□□□□ -1.55
HDAC9-214ENST00000441542 C19orf84I3L1E1 186 aa5.38□□□□□ -1.55
HDAC9-214ENST00000441542 Q6ZTI0 123 aa5.38□□□□□ -1.55
HDAC9-214ENST00000441542 CSMD2Q7Z408 3487 aa5.38□□□□□ -1.55
HDAC9-214ENST00000441542 MAST4O15021 2626 aa5.38□□□□□ -1.55
HDAC9-214ENST00000441542 UBE2L6O14933 153 aa5.38□□□□□ -1.55
HDAC9-214ENST00000441542 RBM3P98179 157 aaKnown RBP5.38□□□□□ -1.55
HDAC9-214ENST00000441542 MPLKIPQ8TAP9 179 aa5.38□□□□□ -1.55
HDAC9-214ENST00000441542 RMI2Q96E14 147 aa5.38□□□□□ -1.55
HDAC9-214ENST00000441542 TENM4Q6N022 2769 aa5.38□□□□□ -1.55
HDAC9-214ENST00000441542 IGKV2-28A0A075B6P5 120 aa5.38□□□□□ -1.55
HDAC9-214ENST00000441542 IGKV2D-28P01615 120 aa5.38□□□□□ -1.55
HDAC9-214ENST00000441542 CLPSL2Q6UWE3 100 aa5.38□□□□□ -1.55
HDAC9-214ENST00000441542 C11orf45Q8TAV5 145 aa5.38□□□□□ -1.55
HDAC9-214ENST00000441542 COPS9Q8WXC6 57 aa5.37□□□□□ -1.55
HDAC9-214ENST00000441542 USMG5Q96IX5 58 aa5.37□□□□□ -1.55
HDAC9-214ENST00000441542 LINC00474Q9P2X8 69 aa5.37□□□□□ -1.55
HDAC9-214ENST00000441542 XCL1P47992 114 aa5.37□□□□□ -1.55
HDAC9-214ENST00000441542 CCL18P55774 89 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms