RNA–Protein interactions for RNA: ENST00000440760.5

SNX17-203, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,955 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-203ENST00000440760 TIRAPP58753 221 aa13.04□□□□□ -0.32
SNX17-203ENST00000440760 BOD1L2Q8IYS8 172 aa13.04□□□□□ -0.32
SNX17-203ENST00000440760 MAPKAPK5-AS1Q8N8E1 139 aa13.04□□□□□ -0.32
SNX17-203ENST00000440760 LINC00269Q8N2A0 174 aa13.03□□□□□ -0.32
SNX17-203ENST00000440760 CSMD3Q7Z407 3707 aa13.03□□□□□ -0.32
SNX17-203ENST00000440760 FAM19A3Q7Z5A8 133 aa13.03□□□□□ -0.32
SNX17-203ENST00000440760 DYNC2H1Q8NCM8 4307 aaKnown RBP13.03□□□□□ -0.32
SNX17-203ENST00000440760 IGHV3-30P01768 117 aa13.02□□□□□ -0.32
SNX17-203ENST00000440760 IGHV3-33P01772 117 aa13.02□□□□□ -0.32
SNX17-203ENST00000440760 IGHV3-30-3P0DP02 117 aa13.02□□□□□ -0.32
SNX17-203ENST00000440760 IGHV3-30-5P0DP03 117 aa13.02□□□□□ -0.32
SNX17-203ENST00000440760 PCP4P48539 62 aa13.02□□□□□ -0.32
SNX17-203ENST00000440760 HERVK_113P63121 156 aa13.02□□□□□ -0.32
SNX17-203ENST00000440760 C2orf91Q6ZV80 131 aa13.02□□□□□ -0.32
SNX17-203ENST00000440760 C15orf53Q8NAA6 179 aa13.02□□□□□ -0.32
SNX17-203ENST00000440760 FBN3Q75N90 2809 aa13.02□□□□□ -0.32
SNX17-203ENST00000440760 IGLV5-45A0A087WSX0 123 aa13.01□□□□□ -0.33
SNX17-203ENST00000440760 DNAH7Q8WXX0 4024 aa13.01□□□□□ -0.33
SNX17-203ENST00000440760 LINC00959A0A1B0GUT2 108 aa13.01□□□□□ -0.33
SNX17-203ENST00000440760 BVES-AS1Q5T3Y7 98 aa13.01□□□□□ -0.33
SNX17-203ENST00000440760 Q6ZVH6 145 aa13□□□□□ -0.33
SNX17-203ENST00000440760 LYSTQ99698 3801 aa13□□□□□ -0.33
SNX17-203ENST00000440760 TAX1BP3O14907 124 aa12.99□□□□□ -0.33
SNX17-203ENST00000440760 SEC11AP67812 179 aa12.99□□□□□ -0.33
SNX17-203ENST00000440760 REG3AQ06141 175 aa12.99□□□□□ -0.33
SNX17-203ENST00000440760 KLK12Q9UKR0 248 aa12.99□□□□□ -0.33
SNX17-203ENST00000440760 VAMP3Q15836 100 aa12.98□□□□□ -0.33
SNX17-203ENST00000440760 IGLV10-54A0A075B6I4 117 aa12.98□□□□□ -0.33
SNX17-203ENST00000440760 J3QQQ9 107 aa12.98□□□□□ -0.33
SNX17-203ENST00000440760 LEPROTO15243 131 aa12.98□□□□□ -0.33
SNX17-203ENST00000440760 XCL1P47992 114 aa12.98□□□□□ -0.33
SNX17-203ENST00000440760 ZNF815PA8K554 130 aa12.97□□□□□ -0.33
SNX17-203ENST00000440760 H3BRM9 83 aa12.97□□□□□ -0.33
SNX17-203ENST00000440760 LINC00588Q9Y4M8 146 aa12.97□□□□□ -0.33
SNX17-203ENST00000440760 PLECQ15149 4684 aaKnown RBP12.96□□□□□ -0.33
SNX17-203ENST00000440760 IGHV1-58A0A0C4DH39 117 aa12.96□□□□□ -0.33
SNX17-203ENST00000440760 MYMXA0A1B0GTQ4 84 aa12.96□□□□□ -0.33
SNX17-203ENST00000440760 STARD9Q9P2P6 4700 aa12.96□□□□□ -0.33
SNX17-203ENST00000440760 SMIM1B2RUZ4 78 aa12.96□□□□□ -0.34
SNX17-203ENST00000440760 LGALS3P17931 250 aaKnown RBP12.96□□□□□ -0.34
SNX17-203ENST00000440760 SS18Q15532 418 aa12.95□□□□□ -0.34
SNX17-203ENST00000440760 PLEKHB2Q96CS7 222 aa12.95□□□□□ -0.34
SNX17-203ENST00000440760 IGHV3OR16-9A0A0B4J2B5 98 aa12.94□□□□□ -0.34
SNX17-203ENST00000440760 C5orf38Q86SI9 138 aa12.94□□□□□ -0.34
SNX17-203ENST00000440760 ENHOQ6UWT2 76 aa12.92□□□□□ -0.34
SNX17-203ENST00000440760 CHCHD10Q8WYQ3 142 aaPredicted RBP12.92□□□□□ -0.34
SNX17-203ENST00000440760 UBE2WQ96B02 151 aa12.92□□□□□ -0.34
SNX17-203ENST00000440760 PRR34Q9NV39 138 aa12.92□□□□□ -0.34
SNX17-203ENST00000440760 IGLV5-39A0A0G2JS06 123 aa12.92□□□□□ -0.34
SNX17-203ENST00000440760 CCL18P55774 89 aa12.91□□□□□ -0.34
SNX17-203ENST00000440760 SIVA1O15304 175 aa12.9□□□□□ -0.34
SNX17-203ENST00000440760 CRPP02741 224 aa12.9□□□□□ -0.34
SNX17-203ENST00000440760 LINC01556Q5JQF7 62 aa12.9□□□□□ -0.34
SNX17-203ENST00000440760 SCGB1D4Q6XE38 83 aa12.9□□□□□ -0.34
SNX17-203ENST00000440760 APLNQ9ULZ1 77 aa12.9□□□□□ -0.34
SNX17-203ENST00000440760 C21orf62-AS1Q17RA5 79 aa12.89□□□□□ -0.35
SNX17-203ENST00000440760 A0A087WZ39 114 aa12.89□□□□□ -0.35
SNX17-203ENST00000440760 C10orf126Q8N4M7 172 aa12.89□□□□□ -0.35
SNX17-203ENST00000440760 NDUFA12Q9UI09 145 aa12.88□□□□□ -0.35
SNX17-203ENST00000440760 DNAH10OSP0CZ25 163 aa12.87□□□□□ -0.35
SNX17-203ENST00000440760 ZFAND6Q6FIF0 208 aa12.87□□□□□ -0.35
SNX17-203ENST00000440760 CD164L2Q6UWJ8 174 aa12.87□□□□□ -0.35
SNX17-203ENST00000440760 HIGD1BQ9P298 99 aa12.87□□□□□ -0.35
SNX17-203ENST00000440760 TENM2Q9NT68 2774 aa12.87□□□□□ -0.35
SNX17-203ENST00000440760 DNAH1Q9P2D7 4330 aa12.87□□□□□ -0.35
SNX17-203ENST00000440760 TOMM7Q9P0U1 55 aa12.87□□□□□ -0.35
SNX17-203ENST00000440760 TGP01266 2768 aa12.86□□□□□ -0.35
SNX17-203ENST00000440760 GAGE12HA6NDE8 117 aa12.86□□□□□ -0.35
SNX17-203ENST00000440760 NUPR2A6NF83 97 aa12.86□□□□□ -0.35
SNX17-203ENST00000440760 FOXI1Q12951 378 aa12.86□□□□□ -0.35
SNX17-203ENST00000440760 OCIAD2Q56VL3 154 aa12.85□□□□□ -0.35
SNX17-203ENST00000440760 HSD52Q0P140 79 aa12.85□□□□□ -0.35
SNX17-203ENST00000440760 A0A0J9YXY3 114 aa12.83□□□□□ -0.35
SNX17-203ENST00000440760 COX7A2LO14548 114 aa12.83□□□□□ -0.35
SNX17-203ENST00000440760 COX7B2Q8TF08 81 aa12.83□□□□□ -0.35
SNX17-203ENST00000440760 Q9H8V8 135 aa12.83□□□□□ -0.35
SNX17-203ENST00000440760 A6NDN8 102 aa12.83□□□□□ -0.36
SNX17-203ENST00000440760 UPK3BQ9BT76 320 aa12.83□□□□□ -0.36
SNX17-203ENST00000440760 NDUFA1O15239 70 aa12.82□□□□□ -0.36
SNX17-203ENST00000440760 MIAQ16674 131 aa12.82□□□□□ -0.36
SNX17-203ENST00000440760 ZNF625Q96I27 306 aaPredicted RBP12.82□□□□□ -0.36
SNX17-203ENST00000440760 Q9HAA7 133 aa12.82□□□□□ -0.36
SNX17-203ENST00000440760 KLK5Q9Y337 293 aaPredicted RBP12.82□□□□□ -0.36
SNX17-203ENST00000440760 UBE2DNLQ8IWF7 75 aa12.81□□□□□ -0.36
SNX17-203ENST00000440760 HIST1H4GQ99525 98 aa12.81□□□□□ -0.36
SNX17-203ENST00000440760 GCSHP23434 173 aa12.81□□□□□ -0.36
SNX17-203ENST00000440760 GTF2H5Q6ZYL4 71 aa12.81□□□□□ -0.36
SNX17-203ENST00000440760 C9orf118A6NHY6 69 aa12.8□□□□□ -0.36
SNX17-203ENST00000440760 K7ERU9 68 aa12.8□□□□□ -0.36
SNX17-203ENST00000440760 MALP21145 153 aa12.8□□□□□ -0.36
SNX17-203ENST00000440760 RNF151Q2KHN1 245 aa12.8□□□□□ -0.36
SNX17-203ENST00000440760 TRAV8-4A0A0B4J246 113 aa12.8□□□□□ -0.36
SNX17-203ENST00000440760 GAGE10A6NGK3 116 aa12.8□□□□□ -0.36
SNX17-203ENST00000440760 FXYD2P54710 66 aa12.79□□□□□ -0.36
SNX17-203ENST00000440760 KRTAP26-1Q6PEX3 210 aa12.79□□□□□ -0.36
SNX17-203ENST00000440760 IGKV2D-24A0A075B6R9 120 aa12.78□□□□□ -0.36
SNX17-203ENST00000440760 LITAFQ99732 161 aa12.78□□□□□ -0.36
SNX17-203ENST00000440760 VPS25Q9BRG1 176 aa12.78□□□□□ -0.36
SNX17-203ENST00000440760 SRSF9Q13242 221 aaKnown RBP eCLIP12.77□□□□□ -0.37
SNX17-203ENST00000440760 CEND1Q8N111 149 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms