RNA–Protein interactions for RNA: ENST00000440514.1

CPSF4-205, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-205ENST00000440514 IGHV1-58A0A0C4DH39 117 aa11.65□□□□□ -0.54
CPSF4-205ENST00000440514 COX7A2LO14548 114 aa11.65□□□□□ -0.54
CPSF4-205ENST00000440514 ZC2HC1BQ5TFG8 222 aa11.65□□□□□ -0.54
CPSF4-205ENST00000440514 C9orf163Q8N9P6 203 aa11.65□□□□□ -0.54
CPSF4-205ENST00000440514 C18orf32Q8TCD1 76 aa11.65□□□□□ -0.54
CPSF4-205ENST00000440514 PKIGQ9Y2B9 76 aa11.65□□□□□ -0.54
CPSF4-205ENST00000440514 IGIPA6NJ69 53 aa11.64□□□□□ -0.55
CPSF4-205ENST00000440514 C5orf38Q86SI9 138 aa11.64□□□□□ -0.55
CPSF4-205ENST00000440514 Q8N1X5 172 aa11.64□□□□□ -0.55
CPSF4-205ENST00000440514 CHCHD1Q96BP2 118 aaKnown RBP11.64□□□□□ -0.55
CPSF4-205ENST00000440514 LINC00526Q96FQ7 95 aa11.64□□□□□ -0.55
CPSF4-205ENST00000440514 SCGB3A1Q96QR1 104 aa11.64□□□□□ -0.55
CPSF4-205ENST00000440514 KRTAP4-5Q9BYR2 181 aa11.64□□□□□ -0.55
CPSF4-205ENST00000440514 S100A1P23297 94 aa11.63□□□□□ -0.55
CPSF4-205ENST00000440514 LINC00173Q6ZV60 143 aa11.63□□□□□ -0.55
CPSF4-205ENST00000440514 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.61□□□□□ -0.55
CPSF4-205ENST00000440514 ZNF561-AS1K7EIQ3 104 aa11.61□□□□□ -0.55
CPSF4-205ENST00000440514 SMR3BP02814 79 aaPredicted RBP11.61□□□□□ -0.55
CPSF4-205ENST00000440514 SCXQ7RTU7 201 aa11.61□□□□□ -0.55
CPSF4-205ENST00000440514 AMELXQ99217 191 aa11.61□□□□□ -0.55
CPSF4-205ENST00000440514 IGHV3-64A0A075B6Q5 118 aa11.6□□□□□ -0.55
CPSF4-205ENST00000440514 COLCA2A8K830 154 aa11.6□□□□□ -0.55
CPSF4-205ENST00000440514 HBDP02042 147 aa11.6□□□□□ -0.55
CPSF4-205ENST00000440514 URB1-AS1Q96HZ7 61 aa11.6□□□□□ -0.55
CPSF4-205ENST00000440514 IGHV3OR16-9A0A0B4J2B5 98 aa11.59□□□□□ -0.55
CPSF4-205ENST00000440514 F8WDY8 70 aa11.59□□□□□ -0.55
CPSF4-205ENST00000440514 TRGC2P03986 189 aa11.59□□□□□ -0.55
CPSF4-205ENST00000440514 UBE2D1P51668 147 aa11.59□□□□□ -0.55
CPSF4-205ENST00000440514 LINC00242Q5T6M2 205 aa11.59□□□□□ -0.55
CPSF4-205ENST00000440514 SDIM1Q6ZPB5 146 aa11.59□□□□□ -0.55
CPSF4-205ENST00000440514 BAGE3Q86Y29 109 aa11.59□□□□□ -0.55
CPSF4-205ENST00000440514 LINC01561Q8N1V8 128 aa11.59□□□□□ -0.55
CPSF4-205ENST00000440514 PANO1I0J062 215 aa11.58□□□□□ -0.56
CPSF4-205ENST00000440514 ATP5LO75964 103 aa11.58□□□□□ -0.56
CPSF4-205ENST00000440514 HERVK_113P63121 156 aa11.58□□□□□ -0.56
CPSF4-205ENST00000440514 FAM19A3Q7Z5A8 133 aa11.58□□□□□ -0.56
CPSF4-205ENST00000440514 OR10D4PQ8NGN7 298 aa11.58□□□□□ -0.56
CPSF4-205ENST00000440514 CHAC1Q9BUX1 264 aa11.58□□□□□ -0.56
CPSF4-205ENST00000440514 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.58□□□□□ -0.56
CPSF4-205ENST00000440514 ABCA13Q86UQ4 5058 aa11.58□□□□□ -0.56
CPSF4-205ENST00000440514 IGLV4-69A0A075B6H9 119 aa11.57□□□□□ -0.56
CPSF4-205ENST00000440514 COX6A2Q02221 97 aa11.57□□□□□ -0.56
CPSF4-205ENST00000440514 PCLOQ9Y6V0 5065 aa11.56□□□□□ -0.56
CPSF4-205ENST00000440514 SPAG11BQ08648 103 aa11.56□□□□□ -0.56
CPSF4-205ENST00000440514 CIRBP-AS1Q8TBR5 109 aa11.56□□□□□ -0.56
CPSF4-205ENST00000440514 CARD19Q96LW7 228 aa11.56□□□□□ -0.56
CPSF4-205ENST00000440514 GEMIN7Q9H840 131 aaKnown RBP11.56□□□□□ -0.56
CPSF4-205ENST00000440514 A0A087WZ39 114 aa11.55□□□□□ -0.56
CPSF4-205ENST00000440514 A0A096LNJ9 63 aa11.55□□□□□ -0.56
CPSF4-205ENST00000440514 HSBP1O75506 76 aa11.55□□□□□ -0.56
CPSF4-205ENST00000440514 CHTF8P0CG12 524 aa11.55□□□□□ -0.56
CPSF4-205ENST00000440514 PMVKQ15126 192 aa11.55□□□□□ -0.56
CPSF4-205ENST00000440514 Q5VSD8 79 aa11.55□□□□□ -0.56
CPSF4-205ENST00000440514 ORAOV1Q8WV07 137 aa11.55□□□□□ -0.56
CPSF4-205ENST00000440514 C2orf48Q96LS8 159 aa11.55□□□□□ -0.56
CPSF4-205ENST00000440514 EPM2AB3EWF7 344 aa11.54□□□□□ -0.56
CPSF4-205ENST00000440514 SYCNQ0VAF6 134 aa11.54□□□□□ -0.56
CPSF4-205ENST00000440514 PMCHL1Q16048 86 aa11.54□□□□□ -0.56
CPSF4-205ENST00000440514 Q6ZRU5 148 aa11.53□□□□□ -0.56
CPSF4-205ENST00000440514 CAMK2N2Q96S95 79 aa11.53□□□□□ -0.56
CPSF4-205ENST00000440514 FAT1Q14517 4588 aa11.53□□□□□ -0.56
CPSF4-205ENST00000440514 LINC00528Q8N1L1 170 aa11.52□□□□□ -0.57
CPSF4-205ENST00000440514 CST9LQ9H4G1 147 aa11.52□□□□□ -0.57
CPSF4-205ENST00000440514 TINCRA0A1B0GVN0 87 aa11.51□□□□□ -0.57
CPSF4-205ENST00000440514 SCO1O75880 301 aa11.51□□□□□ -0.57
CPSF4-205ENST00000440514 CIRBPQ14011 172 aaKnown RBP11.51□□□□□ -0.57
CPSF4-205ENST00000440514 PDZD11Q5EBL8 140 aa11.51□□□□□ -0.57
CPSF4-205ENST00000440514 PACRGQ96M98 296 aaPredicted RBP11.51□□□□□ -0.57
CPSF4-205ENST00000440514 IGKV2-24A0A0C4DH68 120 aa11.5□□□□□ -0.57
CPSF4-205ENST00000440514 A0A0J9YXV3 536 aa11.5□□□□□ -0.57
CPSF4-205ENST00000440514 SPACA4Q8TDM5 124 aa11.5□□□□□ -0.57
CPSF4-205ENST00000440514 LINC00474Q9P2X8 69 aa11.5□□□□□ -0.57
CPSF4-205ENST00000440514 A0A096LNI7 61 aa11.49□□□□□ -0.57
CPSF4-205ENST00000440514 H3BRM9 83 aa11.49□□□□□ -0.57
CPSF4-205ENST00000440514 FAM229AH3BQW9 127 aa11.48□□□□□ -0.57
CPSF4-205ENST00000440514 PRSS2P07478 247 aa11.48□□□□□ -0.57
CPSF4-205ENST00000440514 CDKN2A-AS1Q9UH64 79 aa11.48□□□□□ -0.57
CPSF4-205ENST00000440514 NDUFA6P56556 154 aa11.47□□□□□ -0.57
CPSF4-205ENST00000440514 RNF151Q2KHN1 245 aa11.47□□□□□ -0.57
CPSF4-205ENST00000440514 A0A087WYN8 130 aa11.46□□□□□ -0.57
CPSF4-205ENST00000440514 NDUFA1O15239 70 aa11.46□□□□□ -0.57
CPSF4-205ENST00000440514 KIAA0087Q14695 138 aa11.46□□□□□ -0.57
CPSF4-205ENST00000440514 MAJINQ3KP22 176 aa11.46□□□□□ -0.57
CPSF4-205ENST00000440514 LINC00469Q8N7U9 141 aa11.46□□□□□ -0.57
CPSF4-205ENST00000440514 HSPB8Q9UJY1 196 aa11.46□□□□□ -0.57
CPSF4-205ENST00000440514 VPS13BQ7Z7G8 4022 aa11.45□□□□□ -0.58
CPSF4-205ENST00000440514 IGLV5-45A0A087WSX0 123 aa11.45□□□□□ -0.58
CPSF4-205ENST00000440514 C10orf25Q5T742 122 aa11.45□□□□□ -0.58
CPSF4-205ENST00000440514 IFI27L1Q96BM0 104 aa11.45□□□□□ -0.58
CPSF4-205ENST00000440514 DPH3Q96FX2 82 aa11.45□□□□□ -0.58
CPSF4-205ENST00000440514 TRAV12-1A0A0B4J245 112 aa11.44□□□□□ -0.58
CPSF4-205ENST00000440514 LOC107984640A0A0U1RRK4 108 aa11.44□□□□□ -0.58
CPSF4-205ENST00000440514 ATP6V1G1O75348 118 aa11.44□□□□□ -0.58
CPSF4-205ENST00000440514 SERF1AO75920 110 aa11.44□□□□□ -0.58
CPSF4-205ENST00000440514 LEPROTL1O95214 131 aa11.44□□□□□ -0.58
CPSF4-205ENST00000440514 CXCL5P42830 114 aa11.44□□□□□ -0.58
CPSF4-205ENST00000440514 C6orf226Q5I0X4 101 aa11.44□□□□□ -0.58
CPSF4-205ENST00000440514 UNQ6190/PRO20217Q6UXQ8 127 aa11.44□□□□□ -0.58
CPSF4-205ENST00000440514 MRPL35Q9NZE8 188 aaKnown RBP11.44□□□□□ -0.58
CPSF4-205ENST00000440514 CKS1BP61024 79 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms