RNA–Protein interactions for RNA: ENST00000439487.5

SEMA3B-206, Transcript of semaphorin 3B, humanhuman

TSL 3

Gene SEMA3B, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-206ENST00000439487 MALP21145 153 aa12.6□□□□□ -0.39
SEMA3B-206ENST00000439487 CNBPP62633 177 aaKnown RBP12.6□□□□□ -0.39
SEMA3B-206ENST00000439487 HAMPP81172 84 aa12.6□□□□□ -0.39
SEMA3B-206ENST00000439487 C9orf163Q8N9P6 203 aa12.6□□□□□ -0.39
SEMA3B-206ENST00000439487 C2orf88Q9BSF0 95 aa12.6□□□□□ -0.39
SEMA3B-206ENST00000439487 COLCA2A8K830 154 aa12.59□□□□□ -0.39
SEMA3B-206ENST00000439487 SCO1O75880 301 aa12.59□□□□□ -0.39
SEMA3B-206ENST00000439487 ERASQ7Z444 233 aa12.59□□□□□ -0.39
SEMA3B-206ENST00000439487 LINC00526Q96FQ7 95 aa12.59□□□□□ -0.39
SEMA3B-206ENST00000439487 TRGC2P03986 189 aa12.58□□□□□ -0.4
SEMA3B-206ENST00000439487 UBE2D1P51668 147 aa12.58□□□□□ -0.4
SEMA3B-206ENST00000439487 COX6A2Q02221 97 aa12.58□□□□□ -0.4
SEMA3B-206ENST00000439487 LINC00242Q5T6M2 205 aa12.58□□□□□ -0.4
SEMA3B-206ENST00000439487 IGHV3OR16-9A0A0B4J2B5 98 aa12.57□□□□□ -0.4
SEMA3B-206ENST00000439487 RAB5BP61020 215 aa12.57□□□□□ -0.4
SEMA3B-206ENST00000439487 PAPPA-AS1Q5QFB9 102 aa12.57□□□□□ -0.4
SEMA3B-206ENST00000439487 A0A096LNJ9 63 aa12.56□□□□□ -0.4
SEMA3B-206ENST00000439487 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.56□□□□□ -0.4
SEMA3B-206ENST00000439487 LINC01549A6NIU2 74 aa12.56□□□□□ -0.4
SEMA3B-206ENST00000439487 PMCHL1Q16048 86 aa12.56□□□□□ -0.4
SEMA3B-206ENST00000439487 Q6ZSA8 131 aa12.56□□□□□ -0.4
SEMA3B-206ENST00000439487 ZNF561-AS1K7EIQ3 104 aa12.55□□□□□ -0.4
SEMA3B-206ENST00000439487 APOMO95445 188 aa12.54□□□□□ -0.4
SEMA3B-206ENST00000439487 SDIM1Q6ZPB5 146 aa12.54□□□□□ -0.4
SEMA3B-206ENST00000439487 FAT1Q14517 4588 aa12.54□□□□□ -0.4
SEMA3B-206ENST00000439487 IGLV4-69A0A075B6H9 119 aa12.53□□□□□ -0.4
SEMA3B-206ENST00000439487 IGHV3-64A0A075B6Q5 118 aa12.53□□□□□ -0.4
SEMA3B-206ENST00000439487 HBDP02042 147 aa12.53□□□□□ -0.4
SEMA3B-206ENST00000439487 FAM19A3Q7Z5A8 133 aa12.52□□□□□ -0.41
SEMA3B-206ENST00000439487 A0A087WZ39 114 aa12.51□□□□□ -0.41
SEMA3B-206ENST00000439487 SPAG11BQ08648 103 aa12.51□□□□□ -0.41
SEMA3B-206ENST00000439487 ORAOV1Q8WV07 137 aa12.51□□□□□ -0.41
SEMA3B-206ENST00000439487 A0A0J9YXV3 536 aa12.5□□□□□ -0.41
SEMA3B-206ENST00000439487 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.5□□□□□ -0.41
SEMA3B-206ENST00000439487 SMR3BP02814 79 aaPredicted RBP12.5□□□□□ -0.41
SEMA3B-206ENST00000439487 SYCNQ0VAF6 134 aa12.5□□□□□ -0.41
SEMA3B-206ENST00000439487 PDZD11Q5EBL8 140 aa12.5□□□□□ -0.41
SEMA3B-206ENST00000439487 BAGE3Q86Y29 109 aa12.5□□□□□ -0.41
SEMA3B-206ENST00000439487 CHCHD1Q96BP2 118 aaKnown RBP12.5□□□□□ -0.41
SEMA3B-206ENST00000439487 OR10D4PQ8NGN7 298 aa12.49□□□□□ -0.41
SEMA3B-206ENST00000439487 CARD19Q96LW7 228 aa12.49□□□□□ -0.41
SEMA3B-206ENST00000439487 CST9LQ9H4G1 147 aa12.49□□□□□ -0.41
SEMA3B-206ENST00000439487 PANO1I0J062 215 aa12.48□□□□□ -0.41
SEMA3B-206ENST00000439487 SEC11AP67812 179 aa12.48□□□□□ -0.41
SEMA3B-206ENST00000439487 PMVKQ15126 192 aa12.48□□□□□ -0.41
SEMA3B-206ENST00000439487 Q6ZRU5 148 aa12.48□□□□□ -0.41
SEMA3B-206ENST00000439487 SCXQ7RTU7 201 aa12.48□□□□□ -0.41
SEMA3B-206ENST00000439487 Q8N1X5 172 aa12.48□□□□□ -0.41
SEMA3B-206ENST00000439487 CAMK2N2Q96S95 79 aa12.48□□□□□ -0.41
SEMA3B-206ENST00000439487 CHAC1Q9BUX1 264 aa12.48□□□□□ -0.41
SEMA3B-206ENST00000439487 GEMIN7Q9H840 131 aaKnown RBP12.48□□□□□ -0.41
SEMA3B-206ENST00000439487 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.48□□□□□ -0.41
SEMA3B-206ENST00000439487 NDUFA6P56556 154 aa12.47□□□□□ -0.41
SEMA3B-206ENST00000439487 HERVK_113P63121 156 aa12.47□□□□□ -0.41
SEMA3B-206ENST00000439487 C2orf48Q96LS8 159 aa12.47□□□□□ -0.41
SEMA3B-206ENST00000439487 LINC01561Q8N1V8 128 aa12.46□□□□□ -0.41
SEMA3B-206ENST00000439487 CIRBP-AS1Q8TBR5 109 aa12.46□□□□□ -0.41
SEMA3B-206ENST00000439487 KRTAP4-5Q9BYR2 181 aa12.46□□□□□ -0.41
SEMA3B-206ENST00000439487 CDKN2A-AS1Q9UH64 79 aa12.46□□□□□ -0.41
SEMA3B-206ENST00000439487 HERC1Q15751 4861 aa12.46□□□□□ -0.41
SEMA3B-206ENST00000439487 ATP5LO75964 103 aa12.45□□□□□ -0.42
SEMA3B-206ENST00000439487 CHTF8P0CG12 524 aa12.45□□□□□ -0.42
SEMA3B-206ENST00000439487 TINCRA0A1B0GVN0 87 aa12.44□□□□□ -0.42
SEMA3B-206ENST00000439487 HSBP1O75506 76 aa12.44□□□□□ -0.42
SEMA3B-206ENST00000439487 FAM19A2Q8N3H0 131 aa12.44□□□□□ -0.42
SEMA3B-206ENST00000439487 SERF1AO75920 110 aa12.43□□□□□ -0.42
SEMA3B-206ENST00000439487 LINC00310P59036 64 aa12.43□□□□□ -0.42
SEMA3B-206ENST00000439487 KIAA0087Q14695 138 aa12.43□□□□□ -0.42
SEMA3B-206ENST00000439487 LINC00469Q8N7U9 141 aa12.43□□□□□ -0.42
SEMA3B-206ENST00000439487 DPH3Q96FX2 82 aa12.42□□□□□ -0.42
SEMA3B-206ENST00000439487 VPS13BQ7Z7G8 4022 aa12.42□□□□□ -0.42
SEMA3B-206ENST00000439487 IGKV2-24A0A0C4DH68 120 aa12.41□□□□□ -0.42
SEMA3B-206ENST00000439487 NDUFA1O15239 70 aa12.41□□□□□ -0.42
SEMA3B-206ENST00000439487 NUPR1O60356 82 aa12.41□□□□□ -0.42
SEMA3B-206ENST00000439487 ATP6V1G1O75348 118 aa12.41□□□□□ -0.42
SEMA3B-206ENST00000439487 CIRBPQ14011 172 aaKnown RBP12.41□□□□□ -0.42
SEMA3B-206ENST00000439487 C10orf25Q5T742 122 aa12.41□□□□□ -0.42
SEMA3B-206ENST00000439487 UNQ6190/PRO20217Q6UXQ8 127 aa12.41□□□□□ -0.42
SEMA3B-206ENST00000439487 PACRGQ96M98 296 aaPredicted RBP12.41□□□□□ -0.42
SEMA3B-206ENST00000439487 TOMM7Q9P0U1 55 aa12.41□□□□□ -0.42
SEMA3B-206ENST00000439487 IGLV5-45A0A087WSX0 123 aa12.4□□□□□ -0.42
SEMA3B-206ENST00000439487 A0A096LNI7 61 aa12.4□□□□□ -0.42
SEMA3B-206ENST00000439487 EPM2AB3EWF7 344 aa12.4□□□□□ -0.42
SEMA3B-206ENST00000439487 F8WDY8 70 aa12.4□□□□□ -0.42
SEMA3B-206ENST00000439487 S100A1P23297 94 aa12.4□□□□□ -0.42
SEMA3B-206ENST00000439487 SPACA4Q8TDM5 124 aa12.4□□□□□ -0.42
SEMA3B-206ENST00000439487 IFI27L1Q96BM0 104 aa12.4□□□□□ -0.42
SEMA3B-206ENST00000439487 IGLC3P0DOY3 106 aa12.39□□□□□ -0.43
SEMA3B-206ENST00000439487 Q5VSD8 79 aa12.39□□□□□ -0.43
SEMA3B-206ENST00000439487 MRPL35Q9NZE8 188 aaKnown RBP12.39□□□□□ -0.43
SEMA3B-206ENST00000439487 LOC107984640A0A0U1RRK4 108 aa12.38□□□□□ -0.43
SEMA3B-206ENST00000439487 PRSS2P07478 247 aa12.38□□□□□ -0.43
SEMA3B-206ENST00000439487 RNF151Q2KHN1 245 aa12.38□□□□□ -0.43
SEMA3B-206ENST00000439487 MAJINQ3KP22 176 aa12.38□□□□□ -0.43
SEMA3B-206ENST00000439487 C2orf82Q6UX34 121 aa12.38□□□□□ -0.43
SEMA3B-206ENST00000439487 PKIGQ9Y2B9 76 aa12.38□□□□□ -0.43
SEMA3B-206ENST00000439487 A0A087WYN8 130 aa12.37□□□□□ -0.43
SEMA3B-206ENST00000439487 SMIM1B2RUZ4 78 aa12.37□□□□□ -0.43
SEMA3B-206ENST00000439487 FAM229AH3BQW9 127 aa12.37□□□□□ -0.43
SEMA3B-206ENST00000439487 HIST1H2BKO60814 126 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 119 ms