RNA–Protein interactions for RNA: ENST00000439374.6

CDC42SE1-202, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-202ENST00000439374 DSCR8Q96T75 97 aa7.21□□□□□ -1.26
CDC42SE1-202ENST00000439374 VSIG2Q96IQ7 327 aa7.21□□□□□ -1.26
CDC42SE1-202ENST00000439374 CITED2Q99967 270 aaPredicted RBP7.21□□□□□ -1.26
CDC42SE1-202ENST00000439374 TEP1Q99973 2627 aaKnown RBP7.2□□□□□ -1.26
CDC42SE1-202ENST00000439374 ZNF415Q09FC8 603 aa7.2□□□□□ -1.26
CDC42SE1-202ENST00000439374 NOP10Q9NPE3 64 aaKnown RBP7.2□□□□□ -1.26
CDC42SE1-202ENST00000439374 DEFB130BP0DP73 79 aa7.2□□□□□ -1.26
CDC42SE1-202ENST00000439374 DEFB130AP0DP74 79 aa7.2□□□□□ -1.26
CDC42SE1-202ENST00000439374 C5orf38Q86SI9 138 aa7.2□□□□□ -1.26
CDC42SE1-202ENST00000439374 RNF152Q8N8N0 203 aa7.2□□□□□ -1.26
CDC42SE1-202ENST00000439374 MAP6D1Q9H9H5 199 aa7.2□□□□□ -1.26
CDC42SE1-202ENST00000439374 A0A1B0GX51 115 aa7.2□□□□□ -1.26
CDC42SE1-202ENST00000439374 RBMY1BA6NDE4 496 aaKnown RBP7.2□□□□□ -1.26
CDC42SE1-202ENST00000439374 RBMY1EA6NEQ0 496 aaKnown RBP7.2□□□□□ -1.26
CDC42SE1-202ENST00000439374 NCR3O14931 201 aa7.2□□□□□ -1.26
CDC42SE1-202ENST00000439374 RBMY1DP0C7P1 496 aaKnown RBP7.2□□□□□ -1.26
CDC42SE1-202ENST00000439374 TRBV30A0A0K0K1B3 111 aa7.19□□□□□ -1.26
CDC42SE1-202ENST00000439374 LST1O00453 97 aa7.19□□□□□ -1.26
CDC42SE1-202ENST00000439374 KIR2DL5BQ8NHK3 375 aa7.19□□□□□ -1.26
CDC42SE1-202ENST00000439374 FAM218AQ96MZ4 157 aa7.19□□□□□ -1.26
CDC42SE1-202ENST00000439374 INSP01308 110 aa7.19□□□□□ -1.26
CDC42SE1-202ENST00000439374 SMR3AQ99954 134 aa7.19□□□□□ -1.26
CDC42SE1-202ENST00000439374 CCL24O00175 119 aa7.18□□□□□ -1.26
CDC42SE1-202ENST00000439374 TIRAPP58753 221 aa7.18□□□□□ -1.26
CDC42SE1-202ENST00000439374 J3QLI3 93 aa7.18□□□□□ -1.26
CDC42SE1-202ENST00000439374 UBE2L6O14933 153 aa7.18□□□□□ -1.26
CDC42SE1-202ENST00000439374 Q6ZTI0 123 aa7.18□□□□□ -1.26
CDC42SE1-202ENST00000439374 SBSPONQ8IVN8 264 aa7.18□□□□□ -1.26
CDC42SE1-202ENST00000439374 LINC00308Q8TCZ7 52 aa7.18□□□□□ -1.26
CDC42SE1-202ENST00000439374 ESM1Q9NQ30 184 aa7.18□□□□□ -1.26
CDC42SE1-202ENST00000439374 FAM19A4Q96LR4 140 aa7.18□□□□□ -1.26
CDC42SE1-202ENST00000439374 C9orf85Q96MD7 179 aa7.18□□□□□ -1.26
CDC42SE1-202ENST00000439374 LECT2O14960 151 aa7.17□□□□□ -1.26
CDC42SE1-202ENST00000439374 C9orf129Q5T035 196 aaKnown RBP7.17□□□□□ -1.26
CDC42SE1-202ENST00000439374 SOSTDC1Q6X4U4 206 aa7.17□□□□□ -1.26
CDC42SE1-202ENST00000439374 DNAJC9-AS1A6NH13 148 aa7.17□□□□□ -1.26
CDC42SE1-202ENST00000439374 CRPP02741 224 aa7.17□□□□□ -1.26
CDC42SE1-202ENST00000439374 MED14OSP0DP75 135 aa7.17□□□□□ -1.26
CDC42SE1-202ENST00000439374 MIR7-3HGQ8N6C7 128 aa7.17□□□□□ -1.26
CDC42SE1-202ENST00000439374 UNC79Q9P2D8 2635 aa7.17□□□□□ -1.26
CDC42SE1-202ENST00000439374 LOC100131303A0A0U1RQF7 123 aa7.17□□□□□ -1.26
CDC42SE1-202ENST00000439374 PRR3P79522 188 aaKnown RBP7.17□□□□□ -1.26
CDC42SE1-202ENST00000439374 DEFB114Q30KQ6 69 aa7.17□□□□□ -1.26
CDC42SE1-202ENST00000439374 LITAFQ99732 161 aa7.17□□□□□ -1.26
CDC42SE1-202ENST00000439374 TRAV23DV6A0A075B6W5 121 aa7.16□□□□□ -1.26
CDC42SE1-202ENST00000439374 DEFB4AO15263 64 aa7.16□□□□□ -1.26
CDC42SE1-202ENST00000439374 FAM110AQ9BQ89 295 aa7.16□□□□□ -1.26
CDC42SE1-202ENST00000439374 TRGV4A0A0C4DH28 118 aa7.16□□□□□ -1.26
CDC42SE1-202ENST00000439374 H3BT86 120 aa7.16□□□□□ -1.26
CDC42SE1-202ENST00000439374 RPL36AP83881 106 aaKnown RBP7.15□□□□□ -1.26
CDC42SE1-202ENST00000439374 RPL36ALQ969Q0 106 aaKnown RBP7.15□□□□□ -1.26
CDC42SE1-202ENST00000439374 CYSTM1Q9H1C7 97 aa7.15□□□□□ -1.26
CDC42SE1-202ENST00000439374 HILS1P60008 231 aa7.15□□□□□ -1.26
CDC42SE1-202ENST00000439374 HTN3P15516 51 aa7.15□□□□□ -1.27
CDC42SE1-202ENST00000439374 PF4P02776 101 aa7.14□□□□□ -1.27
CDC42SE1-202ENST00000439374 A0A087WYN8 130 aa7.14□□□□□ -1.27
CDC42SE1-202ENST00000439374 FAM19A5Q7Z5A7 132 aaPredicted RBP7.14□□□□□ -1.27
CDC42SE1-202ENST00000439374 UBE2D4Q9Y2X8 147 aa7.14□□□□□ -1.27
CDC42SE1-202ENST00000439374 TMEM126AQ9H061 195 aa7.14□□□□□ -1.27
CDC42SE1-202ENST00000439374 IGLV10-54A0A075B6I4 117 aa7.13□□□□□ -1.27
CDC42SE1-202ENST00000439374 KLK9Q2XQG4 91 aa7.13□□□□□ -1.27
CDC42SE1-202ENST00000439374 ODF3L2Q3SX64 289 aa7.13□□□□□ -1.27
CDC42SE1-202ENST00000439374 SND1-IT1Q9HBX3 110 aa7.13□□□□□ -1.27
CDC42SE1-202ENST00000439374 HRCT1Q6UXD1 115 aa7.13□□□□□ -1.27
CDC42SE1-202ENST00000439374 MRPS36P82909 103 aaKnown RBP7.13□□□□□ -1.27
CDC42SE1-202ENST00000439374 C3orf22Q8N5N4 141 aa7.13□□□□□ -1.27
CDC42SE1-202ENST00000439374 ZNF469Q96JG9 3925 aaPredicted RBP7.12□□□□□ -1.27
CDC42SE1-202ENST00000439374 COX7A2LO14548 114 aa7.12□□□□□ -1.27
CDC42SE1-202ENST00000439374 XCL1P47992 114 aa7.12□□□□□ -1.27
CDC42SE1-202ENST00000439374 LINC00526Q96FQ7 95 aa7.12□□□□□ -1.27
CDC42SE1-202ENST00000439374 CHCHD7Q9BUK0 85 aa7.12□□□□□ -1.27
CDC42SE1-202ENST00000439374 TMEM89A2RUT3 159 aa7.11□□□□□ -1.27
CDC42SE1-202ENST00000439374 PRB2P02812 416 aaPredicted RBP7.11□□□□□ -1.27
CDC42SE1-202ENST00000439374 C4orf3Q8WVX3 66 aa7.11□□□□□ -1.27
CDC42SE1-202ENST00000439374 A8MTW9 85 aa7.11□□□□□ -1.27
CDC42SE1-202ENST00000439374 LINC00242Q5T6M2 205 aa7.11□□□□□ -1.27
CDC42SE1-202ENST00000439374 SCXQ7RTU7 201 aa7.11□□□□□ -1.27
CDC42SE1-202ENST00000439374 TRBV6-5A0A0K0K1A5 114 aa7.11□□□□□ -1.27
CDC42SE1-202ENST00000439374 A0A096LNT2 108 aa7.1□□□□□ -1.27
CDC42SE1-202ENST00000439374 TRACP01848 142 aa7.1□□□□□ -1.27
CDC42SE1-202ENST00000439374 MALP21145 153 aa7.1□□□□□ -1.27
CDC42SE1-202ENST00000439374 CSDC2Q9Y534 153 aaKnown RBP7.1□□□□□ -1.27
CDC42SE1-202ENST00000439374 LINC00643Q86TS7 51 aa7.1□□□□□ -1.27
CDC42SE1-202ENST00000439374 CXCL5P42830 114 aa7.09□□□□□ -1.27
CDC42SE1-202ENST00000439374 C6orf226Q5I0X4 101 aa7.09□□□□□ -1.27
CDC42SE1-202ENST00000439374 C1orf158Q8N1D5 194 aa7.09□□□□□ -1.27
CDC42SE1-202ENST00000439374 LINC00337Q8N6G1 96 aa7.09□□□□□ -1.27
CDC42SE1-202ENST00000439374 FAM104AQ969W3 186 aa7.09□□□□□ -1.27
CDC42SE1-202ENST00000439374 LINC00846Q9NV44 126 aa7.09□□□□□ -1.27
CDC42SE1-202ENST00000439374 HAMPP81172 84 aa7.09□□□□□ -1.27
CDC42SE1-202ENST00000439374 C4orf26Q17RF5 130 aa7.09□□□□□ -1.27
CDC42SE1-202ENST00000439374 C20orf197Q8N268 126 aa7.09□□□□□ -1.27
CDC42SE1-202ENST00000439374 LINC01006Q8NI28 216 aa7.08□□□□□ -1.28
CDC42SE1-202ENST00000439374 SMIM11BQ8TCY0 68 aa7.08□□□□□ -1.28
CDC42SE1-202ENST00000439374 UQCRQO14949 82 aa7.08□□□□□ -1.28
CDC42SE1-202ENST00000439374 LINC00482Q8N8I6 264 aa7.08□□□□□ -1.28
CDC42SE1-202ENST00000439374 SPANXDQ9BXN6 97 aa7.08□□□□□ -1.28
CDC42SE1-202ENST00000439374 SPANXCQ9NY87 97 aa7.08□□□□□ -1.28
CDC42SE1-202ENST00000439374 SMIM1B2RUZ4 78 aa7.07□□□□□ -1.28
CDC42SE1-202ENST00000439374 ENHOQ6UWT2 76 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms