RNA–Protein interactions for RNA: ENST00000438594.2

HMGB1P12-201, Transcript of high mobility group box 1 pseudogene 12, humanhuman

BASIC

Gene HMGB1P12, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P12-201ENST00000438594 ELOF1P60002 83 aaKnown RBP2.03□□□□□ -2.08
HMGB1P12-201ENST00000438594 PYDC2Q56P42 97 aa2.03□□□□□ -2.08
HMGB1P12-201ENST00000438594 TVP23CQ96ET8 276 aa2.03□□□□□ -2.08
HMGB1P12-201ENST00000438594 PROK2Q9HC23 129 aa2.03□□□□□ -2.08
HMGB1P12-201ENST00000438594 HILPDAQ9Y5L2 63 aa2.03□□□□□ -2.08
HMGB1P12-201ENST00000438594 ZNF462Q96JM2 2506 aa2.02□□□□□ -2.09
HMGB1P12-201ENST00000438594 PRR14LQ5THK1 2151 aa2.02□□□□□ -2.09
HMGB1P12-201ENST00000438594 MED12LQ86YW9 2145 aa2.02□□□□□ -2.09
HMGB1P12-201ENST00000438594 MPDZO75970 2070 aa2.02□□□□□ -2.09
HMGB1P12-201ENST00000438594 A0A0G2JQZ4 141 aa2.02□□□□□ -2.09
HMGB1P12-201ENST00000438594 A0A1B0GWA3 101 aa2.02□□□□□ -2.09
HMGB1P12-201ENST00000438594 KRTAP5-8O75690 187 aa2.02□□□□□ -2.09
HMGB1P12-201ENST00000438594 IGHV3-30P01768 117 aa2.02□□□□□ -2.09
HMGB1P12-201ENST00000438594 C3orf79P0CE67 100 aa2.02□□□□□ -2.09
HMGB1P12-201ENST00000438594 IGHV3-30-5P0DP03 117 aa2.02□□□□□ -2.09
HMGB1P12-201ENST00000438594 PLGLAQ15195 96 aa2.02□□□□□ -2.09
HMGB1P12-201ENST00000438594 DEFB134Q4QY38 66 aa2.02□□□□□ -2.09
HMGB1P12-201ENST00000438594 PSMG4Q5JS54 123 aa2.02□□□□□ -2.09
HMGB1P12-201ENST00000438594 C6orf201Q7Z4U5 140 aa2.02□□□□□ -2.09
HMGB1P12-201ENST00000438594 SPACA4Q8TDM5 124 aa2.02□□□□□ -2.09
HMGB1P12-201ENST00000438594 C4orf3Q8WVX3 66 aa2.02□□□□□ -2.09
HMGB1P12-201ENST00000438594 LENEPQ9Y5L5 61 aa2.02□□□□□ -2.09
HMGB1P12-201ENST00000438594 CEBPZOSA8MTT3 80 aa2.01□□□□□ -2.09
HMGB1P12-201ENST00000438594 HIGD1CA8MV81 97 aa2.01□□□□□ -2.09
HMGB1P12-201ENST00000438594 IGKV3-15P01624 115 aa2.01□□□□□ -2.09
HMGB1P12-201ENST00000438594 GCHFRP30047 84 aa2.01□□□□□ -2.09
HMGB1P12-201ENST00000438594 Q6JHZ5 121 aa2.01□□□□□ -2.09
HMGB1P12-201ENST00000438594 V9GYH0 126 aa2.01□□□□□ -2.09
HMGB1P12-201ENST00000438594 COL4A4P53420 1690 aaPredicted RBP2.01□□□□□ -2.09
HMGB1P12-201ENST00000438594 NINQ8N4C6 2090 aa2.01□□□□□ -2.09
HMGB1P12-201ENST00000438594 MYOFQ9NZM1 2061 aa2.01□□□□□ -2.09
HMGB1P12-201ENST00000438594 SSC5DA1L4H1 1573 aa2.01□□□□□ -2.09
HMGB1P12-201ENST00000438594 MAST4O15021 2626 aa2.01□□□□□ -2.09
HMGB1P12-201ENST00000438594 SIP14410 1827 aa2.01□□□□□ -2.09
HMGB1P12-201ENST00000438594 MICAL3Q7RTP6 2002 aa2□□□□□ -2.09
HMGB1P12-201ENST00000438594 LOC285095A0A1B0GVY8 99 aa2□□□□□ -2.09
HMGB1P12-201ENST00000438594 PPP1R17O96001 155 aa2□□□□□ -2.09
HMGB1P12-201ENST00000438594 IGKV1-17P01599 117 aa2□□□□□ -2.09
HMGB1P12-201ENST00000438594 IGLV3-1P01715 115 aa2□□□□□ -2.09
HMGB1P12-201ENST00000438594 SAA2P0DJI9 122 aaPredicted RBP2□□□□□ -2.09
HMGB1P12-201ENST00000438594 SSBP1Q04837 148 aaKnown RBP2□□□□□ -2.09
HMGB1P12-201ENST00000438594 SMIM5Q71RC9 77 aa2□□□□□ -2.09
HMGB1P12-201ENST00000438594 ARL2-SNX15V9GYD0 113 aa2□□□□□ -2.09
HMGB1P12-201ENST00000438594 CACNA1DQ01668 2161 aa2□□□□□ -2.09
HMGB1P12-201ENST00000438594 KIAA0100Q14667 2235 aaKnown RBP1.99□□□□□ -2.09
HMGB1P12-201ENST00000438594 TRBV6-4A0A1B0GX49 114 aa1.99□□□□□ -2.09
HMGB1P12-201ENST00000438594 PPYP01298 95 aa1.99□□□□□ -2.09
HMGB1P12-201ENST00000438594 ARMS2P0C7Q2 107 aa1.99□□□□□ -2.09
HMGB1P12-201ENST00000438594 PDE6GP18545 87 aa1.99□□□□□ -2.09
HMGB1P12-201ENST00000438594 SPINT3P49223 89 aa1.99□□□□□ -2.09
HMGB1P12-201ENST00000438594 SPAG11BQ08648 103 aa1.99□□□□□ -2.09
HMGB1P12-201ENST00000438594 SPAG11AQ6PDA7 123 aa1.99□□□□□ -2.09
HMGB1P12-201ENST00000438594 Q86TA4 180 aa1.99□□□□□ -2.09
HMGB1P12-201ENST00000438594 KRTAP11-1Q8IUC1 163 aa1.99□□□□□ -2.09
HMGB1P12-201ENST00000438594 GPR98Q8WXG9 6306 aa1.98□□□□□ -2.09
HMGB1P12-201ENST00000438594 RP1P56715 2156 aa1.98□□□□□ -2.09
HMGB1P12-201ENST00000438594 IGKV3D-7A0A0C4DH55 119 aa1.98□□□□□ -2.09
HMGB1P12-201ENST00000438594 IGKV3OR2-268A0A0C4DH90 116 aa1.98□□□□□ -2.09
HMGB1P12-201ENST00000438594 LEPROTL1O95214 131 aa1.98□□□□□ -2.09
HMGB1P12-201ENST00000438594 CCL3L1P16619 93 aa1.98□□□□□ -2.09
HMGB1P12-201ENST00000438594 ZGRF1Q86YA3 2104 aa1.98□□□□□ -2.09
HMGB1P12-201ENST00000438594 Q8N9L7 120 aa1.98□□□□□ -2.09
HMGB1P12-201ENST00000438594 PRR15LQ9BU68 103 aa1.98□□□□□ -2.09
HMGB1P12-201ENST00000438594 UBE2D4Q9Y2X8 147 aa1.98□□□□□ -2.09
HMGB1P12-201ENST00000438594 CR1P17927 2039 aa1.98□□□□□ -2.09
HMGB1P12-201ENST00000438594 ZNF236Q9UL36 1845 aa1.97□□□□□ -2.09
HMGB1P12-201ENST00000438594 JMJD7-PLA2G4BH0Y9G9 81 aa1.97□□□□□ -2.09
HMGB1P12-201ENST00000438594 KRTAP1-4P0C5Y4 121 aa1.97□□□□□ -2.09
HMGB1P12-201ENST00000438594 COX7B2Q8TF08 81 aa1.97□□□□□ -2.09
HMGB1P12-201ENST00000438594 TTTY12Q9BZ98 90 aa1.97□□□□□ -2.09
HMGB1P12-201ENST00000438594 HEATR1Q9H583 2144 aaKnown RBP1.96□□□□□ -2.1
HMGB1P12-201ENST00000438594 USP9XQ93008 2570 aaPredicted RBP1.96□□□□□ -2.1
HMGB1P12-201ENST00000438594 FXYD6-FXYD2A0A087WZ82 144 aa1.96□□□□□ -2.1
HMGB1P12-201ENST00000438594 RNASE3P12724 160 aaKnown RBP1.96□□□□□ -2.1
HMGB1P12-201ENST00000438594 IFI27P40305 119 aaPredicted RBP1.96□□□□□ -2.1
HMGB1P12-201ENST00000438594 CCL18P55774 89 aa1.96□□□□□ -2.1
HMGB1P12-201ENST00000438594 DEFB132Q7Z7B7 95 aa1.96□□□□□ -2.1
HMGB1P12-201ENST00000438594 ZNF563Q8TA94 476 aa1.96□□□□□ -2.1
HMGB1P12-201ENST00000438594 PPP1R1CQ8WVI7 109 aa1.96□□□□□ -2.1
HMGB1P12-201ENST00000438594 UTRNP46939 3433 aa1.95□□□□□ -2.1
HMGB1P12-201ENST00000438594 SETXQ7Z333 2677 aaKnown RBP1.95□□□□□ -2.1
HMGB1P12-201ENST00000438594 TEP1Q99973 2627 aaKnown RBP1.95□□□□□ -2.1
HMGB1P12-201ENST00000438594 CEP350Q5VT06 3117 aa1.95□□□□□ -2.1
HMGB1P12-201ENST00000438594 NBDYA0A0U1RRE5 68 aa1.95□□□□□ -2.1
HMGB1P12-201ENST00000438594 A0A1W2PNN7 141 aa1.95□□□□□ -2.1
HMGB1P12-201ENST00000438594 LRCOL1A6NCL2 159 aa1.95□□□□□ -2.1
HMGB1P12-201ENST00000438594 D6R8Y8 96 aa1.95□□□□□ -2.1
HMGB1P12-201ENST00000438594 FAM74A4Q5TZK3 123 aa1.95□□□□□ -2.1
HMGB1P12-201ENST00000438594 ATP5EP2Q5VTU8 51 aa1.95□□□□□ -2.1
HMGB1P12-201ENST00000438594 MUSTN1Q8IVN3 82 aa1.95□□□□□ -2.1
HMGB1P12-201ENST00000438594 FDCSPQ8NFU4 85 aa1.95□□□□□ -2.1
HMGB1P12-201ENST00000438594 AMELXQ99217 191 aa1.95□□□□□ -2.1
HMGB1P12-201ENST00000438594 GOLGB1Q14789 3259 aaKnown RBP1.95□□□□□ -2.1
HMGB1P12-201ENST00000438594 SEC16AO15027 2179 aa1.95□□□□□ -2.1
HMGB1P12-201ENST00000438594 DOCK11Q5JSL3 2073 aa1.94□□□□□ -2.1
HMGB1P12-201ENST00000438594 IGKV2D-24A0A075B6R9 120 aa1.94□□□□□ -2.1
HMGB1P12-201ENST00000438594 A0A087WTM6 91 aa1.94□□□□□ -2.1
HMGB1P12-201ENST00000438594 TRBV6-5A0A0K0K1A5 114 aa1.94□□□□□ -2.1
HMGB1P12-201ENST00000438594 F8VRH5 84 aa1.94□□□□□ -2.1
HMGB1P12-201ENST00000438594 H3BVH4 76 aa1.94□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms