RNA–Protein interactions for RNA: ENST00000435532.7

NEDD4-202, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD4, Length 5,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-202ENST00000435532 IGKV3D-7A0A0C4DH55 119 aa11.22□□□□□ -0.61
NEDD4-202ENST00000435532 CCDC168Q8NDH2 2452 aa11.22□□□□□ -0.61
NEDD4-202ENST00000435532 CYSRT1A8MQ03 144 aa11.22□□□□□ -0.61
NEDD4-202ENST00000435532 M0QXV9 152 aa11.22□□□□□ -0.61
NEDD4-202ENST00000435532 IGKV4-1P06312 121 aa11.22□□□□□ -0.61
NEDD4-202ENST00000435532 C6orf99Q4VX62 202 aa11.22□□□□□ -0.61
NEDD4-202ENST00000435532 TCL1BO95988 128 aa11.21□□□□□ -0.61
NEDD4-202ENST00000435532 PPDPFQ9H3Y8 114 aa11.21□□□□□ -0.61
NEDD4-202ENST00000435532 USP17L23D6RBM5 183 aa11.21□□□□□ -0.62
NEDD4-202ENST00000435532 C14orf132Q9NPU4 83 aa11.21□□□□□ -0.62
NEDD4-202ENST00000435532 PRR14LQ5THK1 2151 aa11.21□□□□□ -0.62
NEDD4-202ENST00000435532 EP400Q96L91 3159 aa11.2□□□□□ -0.62
NEDD4-202ENST00000435532 LYPD5Q6UWN5 251 aa11.2□□□□□ -0.62
NEDD4-202ENST00000435532 RPL37AP8A6NKH3 93 aa11.2□□□□□ -0.62
NEDD4-202ENST00000435532 SEC61GP60059 68 aa11.18□□□□□ -0.62
NEDD4-202ENST00000435532 ATOX1O00244 68 aa11.17□□□□□ -0.62
NEDD4-202ENST00000435532 TMEM258P61165 79 aa11.17□□□□□ -0.62
NEDD4-202ENST00000435532 WFDC9Q8NEX5 89 aa11.17□□□□□ -0.62
NEDD4-202ENST00000435532 ZNF73O43830 326 aaPredicted RBP11.16□□□□□ -0.62
NEDD4-202ENST00000435532 CASC2Q6XLA1 102 aa11.16□□□□□ -0.62
NEDD4-202ENST00000435532 IGLV9-49A0A0B4J1Y8 123 aa11.16□□□□□ -0.62
NEDD4-202ENST00000435532 C6orf223Q8N319 242 aa11.15□□□□□ -0.62
NEDD4-202ENST00000435532 C2orf48Q96LS8 159 aa11.15□□□□□ -0.62
NEDD4-202ENST00000435532 FOXI1Q12951 378 aa11.14□□□□□ -0.63
NEDD4-202ENST00000435532 MDFIQ99750 246 aa11.14□□□□□ -0.63
NEDD4-202ENST00000435532 CSDC2Q9Y534 153 aaKnown RBP11.14□□□□□ -0.63
NEDD4-202ENST00000435532 A0A1B0GUV1 79 aa11.14□□□□□ -0.63
NEDD4-202ENST00000435532 REG3GQ6UW15 175 aa11.14□□□□□ -0.63
NEDD4-202ENST00000435532 COX8CQ7Z4L0 72 aa11.14□□□□□ -0.63
NEDD4-202ENST00000435532 POM121L12Q8N7R1 296 aa11.14□□□□□ -0.63
NEDD4-202ENST00000435532 EXPH5Q8NEV8 1989 aa11.14□□□□□ -0.63
NEDD4-202ENST00000435532 WNK1Q9H4A3 2382 aa11.14□□□□□ -0.63
NEDD4-202ENST00000435532 FASNP49327 2511 aaKnown RBP11.14□□□□□ -0.63
NEDD4-202ENST00000435532 CDPF1Q6NVV7 123 aa11.14□□□□□ -0.63
NEDD4-202ENST00000435532 C10orf25Q5T742 122 aa11.13□□□□□ -0.63
NEDD4-202ENST00000435532 SPINK6Q6UWN8 80 aa11.13□□□□□ -0.63
NEDD4-202ENST00000435532 A8MZ25 164 aa11.13□□□□□ -0.63
NEDD4-202ENST00000435532 WFDC10BQ8IUB3 73 aa11.12□□□□□ -0.63
NEDD4-202ENST00000435532 ARHGAP32A7KAX9 2087 aa11.12□□□□□ -0.63
NEDD4-202ENST00000435532 HRCT1Q6UXD1 115 aa11.12□□□□□ -0.63
NEDD4-202ENST00000435532 UNQ6190/PRO20217Q6UXQ8 127 aa11.12□□□□□ -0.63
NEDD4-202ENST00000435532 LINC00242Q5T6M2 205 aa11.12□□□□□ -0.63
NEDD4-202ENST00000435532 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.12□□□□□ -0.63
NEDD4-202ENST00000435532 SLPIP03973 132 aa11.12□□□□□ -0.63
NEDD4-202ENST00000435532 HCFC1P51610 2035 aa11.11□□□□□ -0.63
NEDD4-202ENST00000435532 TAX1BP3O14907 124 aa11.11□□□□□ -0.63
NEDD4-202ENST00000435532 CCKP06307 115 aa11.11□□□□□ -0.63
NEDD4-202ENST00000435532 LINC01561Q8N1V8 128 aa11.11□□□□□ -0.63
NEDD4-202ENST00000435532 IGLV4-60A0A075B6I1 120 aa11.1□□□□□ -0.63
NEDD4-202ENST00000435532 IGIPA6NJ69 53 aa11.1□□□□□ -0.63
NEDD4-202ENST00000435532 TP73-AS1Q9UF72 201 aa11.1□□□□□ -0.63
NEDD4-202ENST00000435532 C1orf137Q5JT78 98 aa11.09□□□□□ -0.63
NEDD4-202ENST00000435532 Q6ZQY7 126 aa11.09□□□□□ -0.63
NEDD4-202ENST00000435532 SPTBN4Q9H254 2564 aa11.09□□□□□ -0.63
NEDD4-202ENST00000435532 ATP5EP2Q5VTU8 51 aa11.09□□□□□ -0.63
NEDD4-202ENST00000435532 WFDC2Q14508 124 aa11.09□□□□□ -0.63
NEDD4-202ENST00000435532 LINC01556Q5JQF7 62 aa11.09□□□□□ -0.63
NEDD4-202ENST00000435532 MAPKAPK5-AS1Q8N8E1 139 aa11.09□□□□□ -0.63
NEDD4-202ENST00000435532 WWC2-AS2Q96NR7 200 aa11.09□□□□□ -0.63
NEDD4-202ENST00000435532 LINC00643Q86TS7 51 aa11.08□□□□□ -0.64
NEDD4-202ENST00000435532 PTPRBP23467 1997 aa11.08□□□□□ -0.64
NEDD4-202ENST00000435532 CELA1Q9UNI1 258 aa11.07□□□□□ -0.64
NEDD4-202ENST00000435532 NDUFC2-KCTD14E9PQ53 114 aa11.07□□□□□ -0.64
NEDD4-202ENST00000435532 H3BNG1 76 aa11.07□□□□□ -0.64
NEDD4-202ENST00000435532 TRIAP1O43715 76 aa11.07□□□□□ -0.64
NEDD4-202ENST00000435532 TLN1Q9Y490 2541 aaKnown RBP11.07□□□□□ -0.64
NEDD4-202ENST00000435532 SBSPONQ8IVN8 264 aa11.06□□□□□ -0.64
NEDD4-202ENST00000435532 PIEZO2Q9H5I5 2752 aa11.06□□□□□ -0.64
NEDD4-202ENST00000435532 TET2Q6N021 2002 aaPredicted RBP11.06□□□□□ -0.64
NEDD4-202ENST00000435532 SMIM1B2RUZ4 78 aa11.06□□□□□ -0.64
NEDD4-202ENST00000435532 SMIM11BQ8TCY0 68 aa11.06□□□□□ -0.64
NEDD4-202ENST00000435532 CEP295Q9C0D2 2601 aa11.05□□□□□ -0.64
NEDD4-202ENST00000435532 ZNF462Q96JM2 2506 aa11.05□□□□□ -0.64
NEDD4-202ENST00000435532 GAS8-AS1O95177 125 aa11.05□□□□□ -0.64
NEDD4-202ENST00000435532 LINC00694P0DN24 101 aa11.04□□□□□ -0.64
NEDD4-202ENST00000435532 FAM236AA0A1B0GUQ0 79 aa11.04□□□□□ -0.64
NEDD4-202ENST00000435532 FAM236BA0A1B0GV22 79 aa11.04□□□□□ -0.64
NEDD4-202ENST00000435532 COX6A2Q02221 97 aa11.04□□□□□ -0.64
NEDD4-202ENST00000435532 PRYO14603 147 aa11.03□□□□□ -0.64
NEDD4-202ENST00000435532 CIRBP-AS1Q8TBR5 109 aa11.03□□□□□ -0.64
NEDD4-202ENST00000435532 TANC2Q9HCD6 1990 aa11.03□□□□□ -0.64
NEDD4-202ENST00000435532 MRPL55Q7Z7F7 128 aaKnown RBP11.03□□□□□ -0.64
NEDD4-202ENST00000435532 Q6ZSN1 163 aa11.02□□□□□ -0.65
NEDD4-202ENST00000435532 C3orf84H3BNL1 204 aa11.02□□□□□ -0.65
NEDD4-202ENST00000435532 SORL1Q92673 2214 aa11.01□□□□□ -0.65
NEDD4-202ENST00000435532 Q6JHZ5 121 aa11.01□□□□□ -0.65
NEDD4-202ENST00000435532 AMELXQ99217 191 aa11.01□□□□□ -0.65
NEDD4-202ENST00000435532 C11orf72Q8NBR9 251 aa11.01□□□□□ -0.65
NEDD4-202ENST00000435532 NDUFV3P56181 108 aaKnown RBP11□□□□□ -0.65
NEDD4-202ENST00000435532 C9orf116Q5BN46 136 aaPredicted RBP11□□□□□ -0.65
NEDD4-202ENST00000435532 TRBV10-3A0A0K0K1G6 114 aa10.99□□□□□ -0.65
NEDD4-202ENST00000435532 C5orf47Q569G3 176 aa10.99□□□□□ -0.65
NEDD4-202ENST00000435532 SPATA3Q8NHX4 192 aa10.99□□□□□ -0.65
NEDD4-202ENST00000435532 YPEL4Q96NS1 127 aa10.99□□□□□ -0.65
NEDD4-202ENST00000435532 ANKRD11Q6UB99 2663 aaPredicted RBP10.98□□□□□ -0.65
NEDD4-202ENST00000435532 PLXNB1O43157 2135 aa10.98□□□□□ -0.65
NEDD4-202ENST00000435532 FAM229AH3BQW9 127 aa10.98□□□□□ -0.65
NEDD4-202ENST00000435532 LST1O00453 97 aa10.98□□□□□ -0.65
NEDD4-202ENST00000435532 ABCA2Q9BZC7 2435 aa10.98□□□□□ -0.65
NEDD4-202ENST00000435532 ESRGQ1W209 222 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms