RNA–Protein interactions for RNA: ENST00000433439.1

CNOT9-205, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 4

Gene CNOT9, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-205ENST00000433439 COX6A2Q02221 97 aa10.15□□□□□ -0.78
CNOT9-205ENST00000433439 GEMIN7Q9H840 131 aaKnown RBP10.15□□□□□ -0.78
CNOT9-205ENST00000433439 USP17L23D6RBM5 183 aa10.14□□□□□ -0.79
CNOT9-205ENST00000433439 COX7A2LO14548 114 aa10.14□□□□□ -0.79
CNOT9-205ENST00000433439 EREGO14944 169 aa10.14□□□□□ -0.79
CNOT9-205ENST00000433439 MALP21145 153 aa10.14□□□□□ -0.79
CNOT9-205ENST00000433439 TMA7Q9Y2S6 64 aaKnown RBP10.14□□□□□ -0.79
CNOT9-205ENST00000433439 LRCOL1A6NCL2 159 aa10.13□□□□□ -0.79
CNOT9-205ENST00000433439 CHTOPQ9Y3Y2 248 aaKnown RBP10.13□□□□□ -0.79
CNOT9-205ENST00000433439 S100A2P29034 98 aa10.12□□□□□ -0.79
CNOT9-205ENST00000433439 SNRPEP62304 92 aaKnown RBP10.12□□□□□ -0.79
CNOT9-205ENST00000433439 SEC11AP67812 179 aa10.12□□□□□ -0.79
CNOT9-205ENST00000433439 MAP1LC3CQ9BXW4 147 aa10.12□□□□□ -0.79
CNOT9-205ENST00000433439 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.11□□□□□ -0.79
CNOT9-205ENST00000433439 IGHV3OR16-9A0A0B4J2B5 98 aa10.11□□□□□ -0.79
CNOT9-205ENST00000433439 FUSP35637 526 aaKnown RBP eCLIP10.11□□□□□ -0.79
CNOT9-205ENST00000433439 HERVK_113P63121 156 aa10.11□□□□□ -0.79
CNOT9-205ENST00000433439 HIGD2BQ4VC39 106 aa10.11□□□□□ -0.79
CNOT9-205ENST00000433439 LINC00469Q8N7U9 141 aa10.11□□□□□ -0.79
CNOT9-205ENST00000433439 CFAP161Q6P656 301 aa10.1□□□□□ -0.79
CNOT9-205ENST00000433439 HIST3H2BBQ8N257 126 aa10.1□□□□□ -0.79
CNOT9-205ENST00000433439 CHAC1Q9BUX1 264 aa10.1□□□□□ -0.79
CNOT9-205ENST00000433439 CDKN2A-AS1Q9UH64 79 aa10.1□□□□□ -0.79
CNOT9-205ENST00000433439 RYR1P21817 5038 aa10.09□□□□□ -0.79
CNOT9-205ENST00000433439 TRAV12-1A0A0B4J245 112 aa10.09□□□□□ -0.79
CNOT9-205ENST00000433439 IGHV1-58A0A0C4DH39 117 aa10.09□□□□□ -0.79
CNOT9-205ENST00000433439 TINCRA0A1B0GVN0 87 aa10.09□□□□□ -0.79
CNOT9-205ENST00000433439 hDV102S1A0JD36 115 aa10.09□□□□□ -0.79
CNOT9-205ENST00000433439 C14orf177Q52M58 125 aa10.09□□□□□ -0.79
CNOT9-205ENST00000433439 FAM19A3Q7Z5A8 133 aa10.09□□□□□ -0.79
CNOT9-205ENST00000433439 Q8N814 137 aa10.09□□□□□ -0.79
CNOT9-205ENST00000433439 C15orf56Q8N910 161 aa10.09□□□□□ -0.79
CNOT9-205ENST00000433439 PMCHL2Q9BQD1 86 aa10.09□□□□□ -0.79
CNOT9-205ENST00000433439 MRPL35Q9NZE8 188 aaKnown RBP10.09□□□□□ -0.79
CNOT9-205ENST00000433439 IGLV4-69A0A075B6H9 119 aa10.08□□□□□ -0.8
CNOT9-205ENST00000433439 APOMO95445 188 aa10.08□□□□□ -0.8
CNOT9-205ENST00000433439 IGLC3P0DOY3 106 aa10.08□□□□□ -0.8
CNOT9-205ENST00000433439 KRTDAPP60985 99 aa10.08□□□□□ -0.8
CNOT9-205ENST00000433439 SPATA12Q7Z6I5 190 aa10.08□□□□□ -0.8
CNOT9-205ENST00000433439 LINC00526Q96FQ7 95 aa10.08□□□□□ -0.8
CNOT9-205ENST00000433439 PACRGQ96M98 296 aaPredicted RBP10.08□□□□□ -0.8
CNOT9-205ENST00000433439 A0A087WZ39 114 aa10.07□□□□□ -0.8
CNOT9-205ENST00000433439 C11orf86A6NJI1 115 aa10.07□□□□□ -0.8
CNOT9-205ENST00000433439 F8VRH5 84 aa10.07□□□□□ -0.8
CNOT9-205ENST00000433439 ODF1Q14990 250 aa10.07□□□□□ -0.8
CNOT9-205ENST00000433439 ORAOV1Q8WV07 137 aa10.07□□□□□ -0.8
CNOT9-205ENST00000433439 SYS1-DBNDD2H3BUS1 97 aa10.06□□□□□ -0.8
CNOT9-205ENST00000433439 SPINK8P0C7L1 97 aa10.06□□□□□ -0.8
CNOT9-205ENST00000433439 C3orf79P0CE67 100 aa10.06□□□□□ -0.8
CNOT9-205ENST00000433439 TMEM170BQ5T4T1 132 aa10.06□□□□□ -0.8
CNOT9-205ENST00000433439 C5orf52A6NGY3 159 aa10.05□□□□□ -0.8
CNOT9-205ENST00000433439 ZNF561-AS1K7EIQ3 104 aa10.05□□□□□ -0.8
CNOT9-205ENST00000433439 ZNF22P17026 224 aaPredicted RBP10.05□□□□□ -0.8
CNOT9-205ENST00000433439 KRTAP10-2P60368 255 aa10.05□□□□□ -0.8
CNOT9-205ENST00000433439 HIST1H2BLQ99880 126 aa10.05□□□□□ -0.8
CNOT9-205ENST00000433439 TOMM7Q9P0U1 55 aa10.05□□□□□ -0.8
CNOT9-205ENST00000433439 IGHV3-64A0A075B6Q5 118 aa10.04□□□□□ -0.8
CNOT9-205ENST00000433439 A0A1B0GVY2 172 aa10.04□□□□□ -0.8
CNOT9-205ENST00000433439 H3BRM9 83 aa10.04□□□□□ -0.8
CNOT9-205ENST00000433439 SPAG11BQ08648 103 aa10.04□□□□□ -0.8
CNOT9-205ENST00000433439 IGLV5-45A0A087WSX0 123 aa10.03□□□□□ -0.8
CNOT9-205ENST00000433439 GVQW2A0A096LPI5 108 aaPredicted RBP10.03□□□□□ -0.8
CNOT9-205ENST00000433439 IGLV5-52A0A0A0MRZ9 124 aa10.03□□□□□ -0.8
CNOT9-205ENST00000433439 PET117Q6UWS5 81 aa10.03□□□□□ -0.8
CNOT9-205ENST00000433439 DNAH10Q8IVF4 4471 aa10.02□□□□□ -0.81
CNOT9-205ENST00000433439 DPM2O94777 84 aa10.02□□□□□ -0.81
CNOT9-205ENST00000433439 DNAH2Q9P225 4427 aa10.01□□□□□ -0.81
CNOT9-205ENST00000433439 SMIM1B2RUZ4 78 aa10.01□□□□□ -0.81
CNOT9-205ENST00000433439 IGKCP01834 107 aa10.01□□□□□ -0.81
CNOT9-205ENST00000433439 PRSS2P07478 247 aa10.01□□□□□ -0.81
CNOT9-205ENST00000433439 LINC01561Q8N1V8 128 aa10.01□□□□□ -0.81
CNOT9-205ENST00000433439 OR10D4PQ8NGN7 298 aa10.01□□□□□ -0.81
CNOT9-205ENST00000433439 PGPEP1Q9NXJ5 209 aa10.01□□□□□ -0.81
CNOT9-205ENST00000433439 PLNP26678 52 aa10□□□□□ -0.81
CNOT9-205ENST00000433439 LINC01620Q4KN68 170 aa10□□□□□ -0.81
CNOT9-205ENST00000433439 NTN5Q8WTR8 489 aaPredicted RBP10□□□□□ -0.81
CNOT9-205ENST00000433439 CAMK2N2Q96S95 79 aa10□□□□□ -0.81
CNOT9-205ENST00000433439 FRAS1Q86XX4 4008 aa9.99□□□□□ -0.81
CNOT9-205ENST00000433439 C20orf202A1L168 122 aa9.99□□□□□ -0.81
CNOT9-205ENST00000433439 SLPIP03973 132 aa9.99□□□□□ -0.81
CNOT9-205ENST00000433439 C6orf226Q5I0X4 101 aa9.99□□□□□ -0.81
CNOT9-205ENST00000433439 LINC01545Q5VT33 79 aa9.99□□□□□ -0.81
CNOT9-205ENST00000433439 DNAH17Q9UFH2 4485 aa9.98□□□□□ -0.81
CNOT9-205ENST00000433439 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.98□□□□□ -0.81
CNOT9-205ENST00000433439 C16orf90A8MZG2 172 aa9.98□□□□□ -0.81
CNOT9-205ENST00000433439 SYCNQ0VAF6 134 aa9.98□□□□□ -0.81
CNOT9-205ENST00000433439 TMEM223A0PJW6 202 aa9.97□□□□□ -0.81
CNOT9-205ENST00000433439 KIAA0087Q14695 138 aa9.97□□□□□ -0.81
CNOT9-205ENST00000433439 CDPF1Q6NVV7 123 aa9.97□□□□□ -0.81
CNOT9-205ENST00000433439 C2orf82Q6UX34 121 aa9.97□□□□□ -0.81
CNOT9-205ENST00000433439 COX7B2Q8TF08 81 aa9.97□□□□□ -0.81
CNOT9-205ENST00000433439 CARD19Q96LW7 228 aa9.97□□□□□ -0.81
CNOT9-205ENST00000433439 NDUFA1O15239 70 aa9.96□□□□□ -0.82
CNOT9-205ENST00000433439 CKS1BP61024 79 aa9.96□□□□□ -0.82
CNOT9-205ENST00000433439 Q6ZRU5 148 aa9.96□□□□□ -0.82
CNOT9-205ENST00000433439 Q8IZM0 81 aa9.96□□□□□ -0.82
CNOT9-205ENST00000433439 C2orf48Q96LS8 159 aa9.96□□□□□ -0.82
CNOT9-205ENST00000433439 GCSHP23434 173 aa9.95□□□□□ -0.82
CNOT9-205ENST00000433439 HERVK_113P61574 105 aa9.95□□□□□ -0.82
CNOT9-205ENST00000433439 CNBPP62633 177 aaKnown RBP9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms