RNA–Protein interactions for RNA: ENST00000433394.1

USP54-206, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 5

Gene USP54, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-206ENST00000433394 HELZ2Q9BYK8 2649 aaKnown RBP2.59□□□□□ -1.99
USP54-206ENST00000433394 CENPEQ02224 2701 aa2.59□□□□□ -2
USP54-206ENST00000433394 ICE1Q9Y2F5 2266 aa2.58□□□□□ -2
USP54-206ENST00000433394 KMT2BQ9UMN6 2715 aaPredicted RBP2.58□□□□□ -2
USP54-206ENST00000433394 CHD3Q12873 2000 aaKnown RBP2.58□□□□□ -2
USP54-206ENST00000433394 ARHGAP32A7KAX9 2087 aa2.58□□□□□ -2
USP54-206ENST00000433394 PIGBOS1A0A0B4J2F0 54 aa2.58□□□□□ -2
USP54-206ENST00000433394 IGLC7A0M8Q6 106 aa2.58□□□□□ -2
USP54-206ENST00000433394 OOSP1A8MZH6 123 aa2.58□□□□□ -2
USP54-206ENST00000433394 J3QKU1 62 aa2.58□□□□□ -2
USP54-206ENST00000433394 HYPMO75409 117 aa2.58□□□□□ -2
USP54-206ENST00000433394 NMBP08949 121 aa2.58□□□□□ -2
USP54-206ENST00000433394 SEC11AP67812 179 aa2.58□□□□□ -2
USP54-206ENST00000433394 CIRBPQ14011 172 aaKnown RBP2.58□□□□□ -2
USP54-206ENST00000433394 C7orf65Q6ZTY9 151 aa2.58□□□□□ -2
USP54-206ENST00000433394 MIR17HGQ75NE6 70 aa2.58□□□□□ -2
USP54-206ENST00000433394 AMELYQ99218 206 aa2.58□□□□□ -2
USP54-206ENST00000433394 ST20Q9HBF5 79 aa2.58□□□□□ -2
USP54-206ENST00000433394 BSNQ9UPA5 3926 aa2.58□□□□□ -2
USP54-206ENST00000433394 PKDREJQ9NTG1 2253 aa2.58□□□□□ -2
USP54-206ENST00000433394 USP9YO00507 2555 aaPredicted RBP2.57□□□□□ -2
USP54-206ENST00000433394 CREBBPQ92793 2442 aa2.57□□□□□ -2
USP54-206ENST00000433394 IQCF6A8MYZ5 107 aa2.57□□□□□ -2
USP54-206ENST00000433394 C19orf84I3L1E1 186 aa2.57□□□□□ -2
USP54-206ENST00000433394 PIN1P1O15428 100 aa2.57□□□□□ -2
USP54-206ENST00000433394 COX7CP15954 63 aa2.57□□□□□ -2
USP54-206ENST00000433394 FAUP35544 74 aaKnown RBP2.57□□□□□ -2
USP54-206ENST00000433394 ATP5EP56381 51 aaPredicted RBP2.57□□□□□ -2
USP54-206ENST00000433394 KISS1Q15726 138 aa2.57□□□□□ -2
USP54-206ENST00000433394 VSTM2AQ8TAG5 236 aa2.57□□□□□ -2
USP54-206ENST00000433394 SCGB3A1Q96QR1 104 aa2.57□□□□□ -2
USP54-206ENST00000433394 PMCHL2Q9BQD1 86 aa2.57□□□□□ -2
USP54-206ENST00000433394 TAS2R4Q9NYW5 299 aa2.57□□□□□ -2
USP54-206ENST00000433394 PTPN13Q12923 2485 aa2.56□□□□□ -2
USP54-206ENST00000433394 IGKV1-9A0A0C4DH69 117 aa2.56□□□□□ -2
USP54-206ENST00000433394 NAP1L6A6NFF2 107 aa2.56□□□□□ -2
USP54-206ENST00000433394 H3BRM9 83 aa2.56□□□□□ -2
USP54-206ENST00000433394 CFDP00746 253 aaPredicted RBP2.56□□□□□ -2
USP54-206ENST00000433394 SLC25A6P12236 298 aa2.56□□□□□ -2
USP54-206ENST00000433394 RPS27P42677 84 aaKnown RBP2.56□□□□□ -2
USP54-206ENST00000433394 FXYD2P54710 66 aa2.56□□□□□ -2
USP54-206ENST00000433394 MPV17LQ2QL34 196 aa2.56□□□□□ -2
USP54-206ENST00000433394 DPPA3Q6W0C5 159 aa2.56□□□□□ -2
USP54-206ENST00000433394 SLC25A26Q70HW3 274 aa2.56□□□□□ -2
USP54-206ENST00000433394 OR5AS1Q8N127 324 aa2.56□□□□□ -2
USP54-206ENST00000433394 FAM216BQ8N7L0 139 aa2.56□□□□□ -2
USP54-206ENST00000433394 OR2T35Q8NGX2 323 aa2.56□□□□□ -2
USP54-206ENST00000433394 TSKUQ8WUA8 353 aa2.56□□□□□ -2
USP54-206ENST00000433394 SMIM4Q8WVI0 70 aa2.56□□□□□ -2
USP54-206ENST00000433394 MGST2Q99735 147 aa2.56□□□□□ -2
USP54-206ENST00000433394 TMEM242Q9NWH2 141 aa2.56□□□□□ -2
USP54-206ENST00000433394 COL12A1Q99715 3063 aa2.56□□□□□ -2
USP54-206ENST00000433394 SPG11Q96JI7 2443 aa2.56□□□□□ -2
USP54-206ENST00000433394 TRBV10-2A0A0K0K1G8 114 aa2.55□□□□□ -2
USP54-206ENST00000433394 TMEM14DPA8MWL7 114 aa2.55□□□□□ -2
USP54-206ENST00000433394 LYRM1O43325 122 aa2.55□□□□□ -2
USP54-206ENST00000433394 CKS2P33552 79 aa2.55□□□□□ -2
USP54-206ENST00000433394 KRTAP12-3P60328 96 aa2.55□□□□□ -2
USP54-206ENST00000433394 BLCAPP62952 87 aa2.55□□□□□ -2
USP54-206ENST00000433394 TDRG1Q3Y452 100 aa2.55□□□□□ -2
USP54-206ENST00000433394 DOCK11Q5JSL3 2073 aa2.55□□□□□ -2
USP54-206ENST00000433394 ARFGEF3Q5TH69 2177 aa2.55□□□□□ -2
USP54-206ENST00000433394 MIC13Q5XKP0 118 aa2.55□□□□□ -2
USP54-206ENST00000433394 NAV2Q8IVL1 2488 aa2.55□□□□□ -2
USP54-206ENST00000433394 C15orf53Q8NAA6 179 aa2.55□□□□□ -2
USP54-206ENST00000433394 OR10AG1Q8NH19 301 aa2.55□□□□□ -2
USP54-206ENST00000433394 TTTY10Q9BZA0 68 aa2.55□□□□□ -2
USP54-206ENST00000433394 CACFD1Q9UGQ2 172 aa2.55□□□□□ -2
USP54-206ENST00000433394 SPCS1Q9Y6A9 102 aa2.55□□□□□ -2
USP54-206ENST00000433394 V9GYH0 126 aa2.55□□□□□ -2
USP54-206ENST00000433394 ANKRD17O75179 2603 aaKnown RBP2.55□□□□□ -2
USP54-206ENST00000433394 FASNP49327 2511 aaKnown RBP2.54□□□□□ -2
USP54-206ENST00000433394 TACC2O95359 2948 aa2.54□□□□□ -2
USP54-206ENST00000433394 UBE2L5PA0A1B0GUS4 154 aa2.54□□□□□ -2
USP54-206ENST00000433394 RBAKDNA6NC62 111 aa2.54□□□□□ -2
USP54-206ENST00000433394 ATOX1O00244 68 aa2.54□□□□□ -2
USP54-206ENST00000433394 TCL1BO95988 128 aa2.54□□□□□ -2
USP54-206ENST00000433394 IL5P05113 134 aa2.54□□□□□ -2
USP54-206ENST00000433394 RNASE4P34096 147 aaKnown RBP2.54□□□□□ -2
USP54-206ENST00000433394 KRTDAPP60985 99 aa2.54□□□□□ -2
USP54-206ENST00000433394 UBE2L3P68036 154 aaKnown RBP2.54□□□□□ -2
USP54-206ENST00000433394 TFF3Q07654 80 aa2.54□□□□□ -2
USP54-206ENST00000433394 INSL4Q14641 139 aa2.54□□□□□ -2
USP54-206ENST00000433394 KRTAP6-3Q3LI67 103 aa2.54□□□□□ -2
USP54-206ENST00000433394 HEPN1Q6WQI6 88 aa2.54□□□□□ -2
USP54-206ENST00000433394 TOMM5Q8N4H5 51 aa2.54□□□□□ -2
USP54-206ENST00000433394 SIGLECL1Q8N7X8 197 aa2.54□□□□□ -2
USP54-206ENST00000433394 FAM213BQ8TBF2 198 aa2.54□□□□□ -2
USP54-206ENST00000433394 C10orf105Q8TEF2 133 aa2.54□□□□□ -2
USP54-206ENST00000433394 PPDPFLQ8WWR9 84 aa2.54□□□□□ -2
USP54-206ENST00000433394 AQP3Q92482 292 aa2.54□□□□□ -2
USP54-206ENST00000433394 DIRC1Q969H9 104 aa2.54□□□□□ -2
USP54-206ENST00000433394 LSM10Q969L4 123 aaKnown RBP2.54□□□□□ -2
USP54-206ENST00000433394 AKAP6Q13023 2319 aa2.54□□□□□ -2
USP54-206ENST00000433394 SMG1Q96Q15 3661 aaKnown RBP2.54□□□□□ -2
USP54-206ENST00000433394 USF3Q68DE3 2245 aa2.53□□□□□ -2
USP54-206ENST00000433394 TANC2Q9HCD6 1990 aa2.53□□□□□ -2
USP54-206ENST00000433394 ABCA12Q86UK0 2595 aa2.53□□□□□ -2
USP54-206ENST00000433394 KANTRA0A1W2PQU2 76 aa2.53□□□□□ -2
USP54-206ENST00000433394 SDCBPO00560 298 aaPredicted RBP2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 120.9 ms